ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089506 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◣ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
NPAS4
HEATR6
PARD6B
TUBD1
RPS6KB1
PSMD6
ARFGEF2
IQGAP3
BRIP1
ZNF217
METTL1
EEF1AKMT3
PFDN4
BCAS4
TSR3
GNPTG
USP32
MOK
DYNLRB2
UNG
HIPK1
XKR7
SUMF1
TRIM37
FBXO32
SLC12A9
APPBP2
FBXO5
PPM1D
SKA3
MRPL57
TEX14
RAD51C
NCOA3
NAGPA
C3orf14
SMYD5
PHTF1
MCM7
AP4M1
VPS50
HEPACAM2
SFSWAP
DHX40
C8orf33
CSTF1
AURKA
C12orf66
SCRT1
BARHL1
CCT2
SAP30BP
RECQL5
CREBRF
CRBN
RAD54B
TRIM33
UTP20
WDR4
YPEL2
TCTN2
FANCI
RUVBL1
PGBD5
ATG14
NCAPH
HSF1
BOP1
HSDL1
DNAAF1
RMDN1
CPNE3
HTR5A
NEURL2
CTSA
MCM10
NUP214
IQSEC3
HCFC2
GLT8D2
ATXN7
THOC7
SGO1
RNF166
CTU2
RAE1
RSPH1
TROAP
ZNF331
CCNB1
ZFYVE1
TOMM70
LNP1
CPLX2
PUF60
SMG8
CEP128
NGDN
FAM214A
RRP15
CLTC
ZFYVE26
RAB22A
NCKAP5L
BIRC5
DDX42
CCDC47
DYRK1B
ATG101
CCNA2
POLR2J3
TRMT61A
PPM1E
TRIP13
BRD9
GRWD1
CCNG2
TTF2
ATXN1L
TTK
MAX
SLC45A3
VARS1
DYNC2I1
SPPL2A
RNF40
CCDC189
DCLRE1B
AP4B1
INCENP
FBXL3
XRCC2
CYB561D1
YIF1A
SKA2
PRR11
TADA2B
CCDC96
NUDT1
MRM2
MED20
BYSL
FAM91A1
USP10
STOML1
KLHDC4
SPTLC1
UBE3B
TTLL11
DDX11
MFSD1
GMCL1
C16orf71
ANKS3
C16orf46
AEN
NEMP1
TMEM208
LRRC29
EIF1AD
BANF1
EBAG9
TMOD3
CENPBD1
NAA25
ANGEL1
ZEB1
L1CAM
VRK1
CBLL1
NDUFAF6
LOC101928764
CCNE2
METTL3
MRPL52
WASHC5
NSMCE2
LZTFL1
NUP107
SART1
GFOD2
ANKRD46
SPAG1
RNFT1
LYSMD2
TMOD2
ECT2
NOL8
CENPP
MAPK8IP2
DNAJA3
CHUK
TDRKH
SAXO2
EFL1
TRIM4
SLC35A1
VGF
TTC27
RRP1
HAUS7
SKIV2L
NELFE
UBE2C
MOCS3
DPM1
RPP40
TRMT61B
AUH
ARFGAP1
EDC4
PRKAR1A
ACOX3
INTS1
DHX37
PPM1B
FANCD2
EXO1
RABL2A
NET1
TACO1
DLGAP5
DDX49
COPE
RHEBL1
TOMM22
MEA1
KLHDC3
SYVN1
TAF5
HMGCS1
ANKRD52
SLC15A4
KIFC1
SIKE1
CYP51A1
PTGFRN
SRGAP2C
FAM72B
CCDC146
HAGH
FAHD1
TOPBP1
TF
ATAD2
STRN3
AP4S1
UTP23
EIF3H
PPP1R12B
STX16
SLC35B1
FIS1
C20orf27
ATG7
MCCC1
SLC25A40
DBF4
PDE4DIP
GSKIP
ATG2B
DDX19A
NUB1
ASNS
DSCC1
PPP1R16A
TMEM150A
MKI67
OSGIN2
DCAF4
POLR2J
ZHX3
ZFAND2A
FAM72C
KIF14
ASPM
AP4E1
NDUFS3
KBTBD4
ADAR
LCMT1
TCP11L2
AMZ2
PSMC1
SF3B3
COG4
GTF2H3
EIF2B1
TWNK
MRPL43
EIF3C
EIF3CL
LMAN2
TBX2
TBC1D13
SLC25A24
VIRMA
CDCA4
SGO2
ATP6V1C1
THOC3
ANAPC7
DUS4L-BCAP29
DUS4L
COG5
KLHL24
DCAF7
SRPK2
EIF2D
SUPT7L
SLC4A1AP
ALAD
SNRPC
TPTE
SRGAP2
FAM72A
MED13
GDPGP1
CIB1
TRAPPC10
ATP5MPL
TSFM
RNF31
PSME2
EFCAB6
TCF19
CCHCR1
ZC3HC1
U2SURP
LEKR1
METTL2A
ZC3H18
RPGR
GNA13
NDE1
MARF1
ARMC2
ZHX1-C8orf76
ZHX1
RHBDD2
INPP5K
VANGL1
VAPB
C8orf76
NANS
H3-3B
PSEN1
CKAP5
HOMEZ
RACGAP1
PDXDC1
IARS1
ATP5MG
NOTCH2NLA
ZC3H3
ZNF529
RFC2
TERF2IP
KARS1
H1-10
ESPL1
TBC1D30
GNS
PRPF18
GLRX5
COX19
NTNG1
PDSS1
URM1
FRAT2
TBC1D23
SPG7
CNIH4
DZIP3
CIP2A
MIS18A
KPNA2
SPC25
CENPN
TIGD5
EEF1D
CSDE1
POLQ
KIF18B
NOL6
GCDH
RFC3
BICDL1
GLE1
MDM1
FANK1
CPSF1
CCDC59
FBXO33
EEF1E1
APH1A
SQLE
TMEM18
BMP7
RSL24D1
LLGL2
SRGAP2B
FAM72D
RABL2B
GTPBP4
PEPD
HEATR5B
GPATCH11
NOTCH2
XPOT
DNAJC21
COPZ1
SH3BP5
IPO4
RTF2
ROPN1L
GOLGA5
VCPKMT
RFWD3
MBTPS1
SMARCA5
B3GNT2
AGFG2
DDX21
AZIN1
YWHAG
CCDC15
E2F4
DNAL1
GPSM2
COX5A
ARPP19
ITGB1
CCDC86
EDC3
CDK1
MRPS23
SSBP2
PCNX3
INTS8
ATP5MF-PTCD1
ATP5MF
GNPNAT1
DSTN
MYL5
ATP5ME
NME1-NME2
NME1
GPATCH4
NHP2
ZBTB9
KCNH6
NBPF11
PIAS3
RMC1
PRIM2
ARHGEF5
TSEN2
PPIL1
MXD1
ACTR3
SLC25A26
USP30
FAAP24
CEP89
DOHH
SUB1
TMEM60
PHTF2
OAZ3
MRPL9
ENDOV
AARS2
GABARAPL2
ARL13B
CDK9
NUDT3
NDUFV1
SMIM5
CDC14B
GFPT1
SSR3
TBK1
MFSD14B
LOC100289561
E2F5
SPATA2L
RRM2
IPO11
FAM227B
DTWD1
FAM185A
DYNC1I2
LRFN4
KLF10
TRPM7
HAUS5
PDAP1
BUD31
ZFAND3
PDF
MAD1L1
ZFPL1
CDCA5
TIMELESS
BBS1
PRMT6
IDH3A
SWI5
GOLGA2
VIPAS39
AHSA1
CNIH1
AFTPH
CTDSP2
CMTM6
DUSP11
MAD2L1
OS9
DUS2
DDX28
NOC4L
DDX51
CCT5
ATPSCKMT
PTPN1
OXNAD1
DPH3
MSH3
DHFR
HELZ
NAA20
GATAD1
NDUFS6
EIF1AX
WDR77
ATP5PB
NBPF12
TRIM45
MTFR2
URB1
PSMB7
SEL1L
SPATA33
MPHOSPH6
DNAJC2
HPS3
WDR37
ZNF706
ZNF383
IFT22
DNAAF2
GPR146
CORO1C
TM9SF1
DIP2C
QTRT1
DEPDC1B
LYRM4
FARS2
KMT5A
SETDB1
MRPL38
RNF19A
ZDHHC17
TUBA1A
TICRR
SHCBP1
PLK1
DERL1
MMS22L
NOTCH2NLB
PSMD4
DENND2C
TMED8
SAMD15
PYCR2
PCLO
SEC22B
VPS13B
HJURP
COPS3
METTL17
RPL30
LIN52
ALDH6A1
SELENOS
CAMKK2
RNF44
RRP12
REXO4
TP53INP1
WDR35
RPTOR
MKS1
RAB1A
MATN3
DNAJC25-GNG10
DNAJC25
NPM1
MBTD1
UTP18
LINS1
ASB7
RFX1
CDK5RAP2
PLCL1
TOGARAM1
KLHL28
GMFB
AGK
LTO1
PTRHD1
CENPO
COMMD1
ZSWIM3
ACOT8
CALCOCO2
UBR5
RNF139
SUMO3
NUF2
NEIL3
HSPA9
SH3BGR
LCA5L
USP14
SKP2
LMBRD2
TARS3
PMEL
CDK2
UQCRC2
SNF8
MROH1
NAMPT
NFAT5
TRIM59
RETREG1
FERMT2
RANBP9
ZSCAN2
INKA2
DDX20
UBXN11
TBC1D15
ATP1A1
TEX10
LRRC37A3
STX4
ZNF281
TRMT1
SPNS1
FBXL13
ARMC10
NRAS
TRUB2
COQ4
ZNF79
TMEM129
TACC3
TM2D3
MDM2
SLC35A2
TECPR1
UBXN7
KAT8
ECSIT
RXYLT1
RNF114
PYCR3
POLR2J2
SCRIB
GEMIN5
GBF1
USP8
SUSD6
S100A13
NOC2L
CHTOP
NARF
TXLNG
ACYP1
COQ5
BLM
ZAR1L
BRCA2
GAR1
POLR3F
DZANK1
CFDP1
ARSG
RAB5B
FANCC
OXR1
ZNF212
SCRN3
CIR1
TEX2
SLC16A6
SLC31A1
FKBP15
PREX1
CUL2
NRBP1
STK38
MND1
VPS11
LIX1L
AP5Z1
CYB561
CS
PRELID3B
RNF181
DLD
RBM25
AP2A1
TRIM56
RHPN1
CKAP2L
RAD51
NCAPG
SRPRB
TMED5
CCDC18
FANCM
HSPA5
ZNF473
VRK3
TADA3
ARPC4-TTLL3
ARPC4
TMEM183A
LSM14B
STRIP1
EEF2K
TMED10
SDE2
WIPI2
C14orf28
ADIPOR1
MAP2K2
EHBP1
CALB1
DISP1
FBXW8
SLC25A19
SLC52A2
FBXL6
ELAC2
CNBP
DOP1A
KNOP1
PUS1
RECQL4
LRRC14
CGGBP1
RFC1
ASCC3
SPOP
MFSD4B
CCDC58
FAM162A
ZNF654
CBLB
ACBD3
MTG1
UPF2
PHETA1
HELZ2
LGALSL
GTSE1
PCOTH
MIPEP
RNMT
FAM210A
CFAP298-TCP10L
CFAP298
CKS2
NOB1
SLC35A5
ATG3
ABCF2
RPL32
SPTLC2
CELF6
FSD1L
PPM1H
DPAGT1
SNX11
CEP164
POC1B-GALNT4
SNX4
SLC27A3
GALNT4
PAWR
VAC14
TONSL
NARS2
EIF2S1
ATP6V1D
STYXL1
SSNA1
ANAPC2
POLR3B
FBXO43
SENP5
CSRNP2
MTCH1
IMPA1
VWA3B
DNAAF3
STRN
NEU3
PXT1
KCTD20
RAD18
PIGU
AURKB
GATB
IREB2
COX14
XPC
LSM3
NBN
MTX1
THBS3
C7orf50
GPATCH2L
YY1AP1
DAP3
ZNF888
ZBTB11
HELLS
JMJD1C
GUK1
BDH1
NEK2
SLX1B
SLX1A
BOLA2B
BOLA2
WIPI1
CNPY3
WDR43
PDZD11
KIF4A
SF3B2
ING4
RC3H2
ZNF263
DCTN2
YWHAZ
DMWD
QSOX2
PPRC1
AP3B2
WDR81
PIP4P2
LRRC47
ENTPD5
BBOF1
CHFR
TRAFD1
TMEM127
CIAO1
L3HYPDH
JKAMP
SMC3
TSPAN10
NPLOC4
PHLPP2
HIP1
COMMD4
UBE2G2
EIF3E
PRKAB1
LOC389831
DNAJC30
BUD23
ZNF3
GFUS
MLEC
CAPZA2
TMED9
MCUR1
RPS6KA4
RPS6KL1
ZNF688
RPIA
NOMO3
RTKN2
NOMO2
INTS2
XPO5
POLH
TMEM258
FEN1
SPG21
KBTBD8
MTIF2
SEC61B
ALG2
PIP4P1
HIF1A
HECTD4
NUP153
LEMD3
BAZ1B
RNF10
TGOLN2
SCFD2
RAD54L
NGRN
MORN2
DHX57
RIPK2
B3GNTL1
NUP160
ZSCAN25
OTULIN
CCND3
P2RY2
DNM1L
USP49
UBE2V1
GOLGA1
YWHAQ
AP1S1
CHAC1
UNC119B
PFKP
PPM1A
DNAH7
MRPL27
EME1
TRIAP1
TMEM203
NDOR1
UMPS
ARL8B
PRKAR1B
ANKRD28
NEK4
TCTN1
GPANK1
CSNK2B
RAB21
SEC11A
TRIM25
KLHL36
RPN1
TMEM250
MAP11
DLG1
GPAA1
RNF4
INPP5E
TRMT6
MCM8
ATP6V0D1
LARP4
RBBP5
RMI2
CRELD1
FRAT1
OTUD6B
NAA35
MTPN
LUZP6
SLC30A5
STX6
TPM3
TMED2
ING2
MACROD2
TRIB1
UBE2J1
MTMR14
SECISBP2
GSN
RAB14
CHD1L
PRKAB2
GOSR2
MDM4
USP36
MAT2A
PRDX6
MAPKAPK5
DECR1
CLASP2
PSMD2
PRPF38B
NR6A1
IDI1
SETD1A
POM121C
PDCD4