ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089496 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◣ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

HEATR6
NPAS4
TUBD1
RPS6KB1
PSMD6
NCAPH
BCAS3
PFDN4
ARFGEF2
TRIM37
PARD6B
APPBP2
SCRT1
BRIP1
SMG8
CRBN
MTRNR2L8
XRCC2
USP32
NCOA3
RAD54B
SFSWAP
HSF1
BOP1
RTEL1
DYNLRB2
PPM1D
OAZ3
MRPL9
UBE3B
MOK
ZNF331
ATXN7
RRP15
TTF2
CLTC
HIPK1
ZNF217
BCAS4
TSR3
GNPTG
C3orf14
METTL1
EEF1AKMT3
CPLX2
TFRC
SUMF1
MTRNR2L2
SAP30BP
RECQL5
TTLL5
ERG28
CCNA2
ARMC2
ATG14
WDR4
IQGAP3
UNG
TRIP13
BRD9
SRPRB
HTR5A
RNFT1
SGO1
MCM7
AP4M1
NET1
XKR7
SIKE1
SEL1L
C8orf33
DCLRE1B
AP4B1
PRMT6
EIF3H
RMDN1
SKIV2L
NELFE
CPNE3
PSMB7
TBC1D23
MOCS3
DPM1
RTF2
RNF40
CCDC189
UBE2C
NDUFAF6
CCNE2
POLQ
KPNA2
TEX14
RAD51C
IQSEC3
LTV1
ZFYVE1
TCTN2
BICDL1
SKA3
MRPL57
PTPN1
BIRC5
TROAP
BLM
UTP20
RRM2
TRIM33
NOTCH2NLC
DCAF7
SPNS1
ATP1A1
CREBRF
PRELID3B
NAA25
NAGPA
NEURL2
CTSA
DHX40
AP4E1
GABARAPL2
SLC12A9
CSTF1
AURKA
BCAS1
SGO2
TMEM186
PMM2
COG7
USP14
USP54
SPTLC1
TACO1
GLRX5
PHTF1
MTPN
LUZP6
RUVBL1
EEFSEC
L1CAM
STX16
FBXO5
NME1-NME2
NME1
NTAQ1
VPS11
DUS4L-BCAP29
DUS4L
COG5
GHITM
EDC3
POLR2J3
NOL8
CENPP
RFC3
TELO2
DOP1A
PPP1R16A
RAE1
CIART
DSCC1
LARP4
SLC35B1
SPPL2A
PIP4P1
QSOX2
METTL2A
METTL17
SPG7
SRGAP2
FAM72A
TRMT61A
GFOD2
MYO5C
CKAP2L
MIS18A
MYL12B
TRPM7
TRIM25
CMTR2
WASHC5
NSMCE2
THAP5
DNAJB9
E2F4
FANCD2
TOP1MT
RXYLT1
MBTD1
UTP18
ARSG
SLC16A6
WDR3
GDAP2
ZFAND2A
NELFB
TSEN2
CDC14B
SURF2
SURF1
ZC3H14
FAM214A
SAXO2
EFL1
EIF3E
ADPGK
NAA35
FCF1
AREL1
MTFR2
FBXO32
PEPD
PRPF3
WDR20
HSP90AA1
CIBAR1
KLC1
HSDL1
DNAAF1
COMMD4
PPIL1
RECQL4
LRRC14
POLR3F
DZANK1
NUP214
PDXDC1
PDPK1
CHD1L
BMP7
PRKAB2
PPM1E
GOLGA5
ZDHHC24
ACTN3
THOC7
RABL2B
NUDT4B
MFSD1
NOTCH2
NUDCD1
C11orf49
SLC22A15
ATP6V1C1
TBX2
SPC25
NUF2
FANCI
C12orf66
RRP12
EXO1
FAM72C
DZIP3
CIP2A
NEIL3
SRGAP2C
FAM72B
TICRR
SRGAP2B
FAM72D
GRWD1
CRNKL1
CFAP61
SCFD2
ZFPL1
CDCA5
BARHL1
TTC27
QTRT1
CCNB1
DHX37
TTK
RAD51
RBM19
CCT2
TRMT1
KIF18B
DLGAP5
CCDC86
SMYD5
CCNG2
NEK2
SMC2
UTP25
KIF20A
BRD8
RAD54L
ESCO2
SLX1B
SLX1A
MCM10
BOLA2B
BOLA2
NOL6
IPO4
WDR74
URB1
VARS1
NEMP1
WASHC2A
WASHC2C
RAD18
PGBD5
BOLA2-SMG1P6
PRCP
BUB1B
GPATCH4
DDIAS
DCAF4
C16orf71
ANKS3
SHCBP1
CDC25A
PIGU
KLHL18
KIF9
RNF166
CTU2
KIFC1
ACOX3
MAPK8IP2
RABL2A
KAT2B
DYNC2I1
C16orf46
VPS50
HEPACAM2
CYB561D1
KIAA0895
CEP55
KIF14
UFD1
CDC45
GTF2H3
EIF2B1
EIF2D
ANLN
USP2
CDC6
EBNA1BP2
CFAP57
MAD2L1
WDR46
PFDN6
NBPF1
CCNB2
CENPW
SKA2
PRR11
AGFG2
LZTFL1
DNA2
VPS33A
ZNF688
PLK4
AURKB
EXOSC5
BCKDHA
POC5
DDX49
COPE
RPP40
HCFC2
GLT8D2
SKA1
TADA2B
CCDC96
HMGB1
CYB5R4
FBXW9
ACTR6
TAF13
TTC26
MYBL2
RRS1
CDK7
KIF2C
TSFM
NUDT15
CCDC146
VRK1
MND1
INTS7
DTL
SHC1
CKS1B
ESPL1
NOP16
HIGD2A
GTF3C4
DDX31
LOC101928764
COMMD9
CEP128
PPAN-P2RY11
PPAN
ASPM
CDK1
RSPH1
TWNK
MRPS23
MRPL43
NUP107
GCDH
PBK
TTLL11
ATAD2
GTSE1
TOMM40
CDC20
DDX11
POLR1B
ZAR1L
BRCA2
PMS2
AIMP2
DYRK1B
NUDT2
KIF24
RBM28
URB2
TAF5L
CEP135
NUDT1
MRM2
UGGT1
TMEM208
LRRC29
RACGAP1
RRP1
KIF15
KIAA1143
NDUFV1
ATR
MARCHF8
NCLN
TRIP4
NOM1
ATG101
GATB
TRMT6
MCM8
AEN
FDX2
NCAPG
KLHDC4
EIF3C
UTP23
HSPA9
RHEBL1
PPRC1
ODF2
TCF19
CCHCR1
PLK1
ZSCAN2
CDC25C
EIF3CL
INKA2
DDX20
PWP1
FBXL13
ARMC10
RBM48
PEX1
VAC14
LSM5
SSBP1
MED20
BYSL
UBXN11
TONSL
SUPV3L1
PNPT1
KNOP1
NHP2
STIL
LSG1
HAGH
FAHD1
NRAS
BBS5
WDR62
THAP8
WIPI1
SNRPE
GPATCH3
PCOTH
MIPEP
ATP6V0D1
HEATR1
DNAH7
DDX21
HEXA
LTN1
EEF1E1
DNAJC25-GNG10
DNAJC25
PNO1
BUB1
AXDND1
NLE1
CLSPN
MRPL27
EME1
ZNF778
C12orf45
IPO11
FAM200B
CENPE
FBXW8
DPH2
RAD9A
POU2F1
DPH1
QTRT2
CCDC191
SLC25A26
TPX2
YPEL2
TRAIP
TPH2
TFB2M
CNST
OS9
ADPRS
TBC1D30
UBN2
PUS1
NPM1
TOP1
RNASEH1
C1orf109
VTA1
NMBR
FARSB
ZGRF1
LARP7
GTPBP4
THOC3
DUS2
DDX28
GTPBP10
GNS
TBRG4
SETD4
TSEN54
TMEM150A
RAB22A
TRAPPC6A
BLOC1S3
BRMS1
GAR1
CDCA8
YIF1A
TDRD7
MCOLN1
CASKIN2
ECSIT
SDAD1
GFM1
TMED5
CCDC18
SLC25A19
CPEB4
CENPN
DIAPH3
POLR2J
ZC3HC1
PUM3
FAM227B
DTWD1
SMIM5
ZNF530
WDR61
SPCS1
GLT8D1
CENPS-CORT
CENPS
PRMT2
SHQ1
RPIA
ANAPC7
METTL2B
UBFD1
EARS2
SNRPD1
TOMM22
RGPD2
RGPD1
WFDC3
DNTTIP1
NOC4L
KNL1
DDX51
ZHX3
HAUS7
NOMO3
ZBTB9
SPATA2
MMUT
CENPQ
TIMELESS
CFAP299
MPHOSPH10
MCEE
DIMT1
SYNJ1
RTKN2
NUP35
PRPF18
PARG
C6orf89
MKI67
PARPBP
NUP37
REXO4
GGH
FLAD1
CENPM
RAD51AP1
C12orf4
KIF23
HBP1
TFIP11
DDX42
CENPH
CCDC47
ASF1B
STOML1
TMEM199
POLDIP2
MYBL1
PDSS1
TBC1D15
LMAN2
DEPDC1B
TRUB2
COQ4
CCDC150
NOL10
MDN1
RRP9
PARP3
ARHGAP11A-SCG5
ARHGAP11A
IREB2
DDX19A
RNASEH2A
ZSWIM8
MRPS35
MRPL3
CCT5
ATPSCKMT
LIX1L
CELSR3
KLHL32
SLF2
DHODH
SERINC3
METTL3
POMZP3
THADA
FAM207A
SPC24
SLC39A6
KLHL24
MTMR14
TRIAP1
RIOK3
DBF4B
SLC52A2
FBXL6
GPAM
SH3BGR
LCA5L
PRPF38A
ORC1
KCTD9
CDCA2
DEPDC1
MRPL4
GPR89A
CENPF
UTP15
ANKRA2
ZNF696
NOMO2
PC
SPEF1
DPY19L4
TRMT61B
APH1A
STAT1
PSME3
HMGB2
FAM185A
ANAPC5
NUB1
ENDOV
ATP5F1E
NOL7
HM13
NARS2
SAR1B
NAT10
HEATR5B
GPATCH11
SECISBP2
DNAJA3
TOM1L2
DRC3
DDX46
IARS1
SEC13
USP30
TAMM41
FANCM
NOMO1
IMP4
CCDC115
NAGK
SNRPD2
QPCTL
OXNAD1
DPH3
NGDN
SEC22B
TOR1A
LSS
ATAD5
KIF11
AP5Z1
MRM1
CALCOCO1
CFDP1
GLE1
CHUK
HROB
FKBP1A
DYNC1I2
CNOT4
DYNLL1
PES1
EIF2S1
ATP6V1D
CNPY3
TEDC1
RNMT
FAM210A
C12orf43
SASS6
MARS2
NDUFAF4
C5orf51
XRN2
RNF114
GNAI3
RPS29
EIF1AD
BANF1
ZBTB49
LYAR
INCENP
CLCC1
CFAP298-TCP10L
CFAP298
WDR43
TMEM67
NEU1
PDZD11
KIF4A
CENPA
RECQL
GOLT1B
LTO1
PTRHD1
CENPO
SPEF2
GPR89B
COX14
OGDH
RBBP5
TEDC2
SYS1
NOLC1
SNAP25
POLR2K
RPL6
CYB561
TIGD5
EEF1D
METTL18
C1orf112
ZNF367
MCRS1
URM1
RPF2
MNS1
INTS2
CDK5RAP3
AARS2
MXD1
LRPPRC
NDUFS3
KBTBD4
GFPT1
SLC19A1
TRMT44
ADAT1
DPP3
OIP5
NUSAP1
ANKRD42
ASB8
AP3B2
MAK16
AOPEP
PIF1
ANAPC10
ABCE1
PYCR3
SMC4
IFT80
CDK5RAP1
PUS7
PALB2
DCTN5
IFT172
CKS2
ZNF408
ARHGAP1
GSN
ROPN1L
POLR2J2
HSPH1
LYRM4
FARS2
ADCK1
TDRKH
ZNF79
CDIPT
ZSWIM9
LIG1
RMI2
HSPA5
XPO5
POLH
PPIL2
ATP5MG
RABIF
GNL2
PCNA
INIP
RHNO1
FOXM1
VPS45
TPRA1
CGGBP1
TAF5
INTS1
TTLL4
SUPT7L
SLC4A1AP
FRAT2
CRCP
NUFIP1
GPALPP1
TMEM203
NDOR1
ECT2
CREB3L2
CDC37
LRRC59
PIMREG
CS
YEATS4
FPGS
DDX41
TMEM231
TFPT
SRD5A1
PRPF31
SSBP2
FAM161A
TMEM248
NDUFAF5
ESF1
CFAP410
SUGP2
ARMC6
STYXL1
CIT
SQLE
MRPL1
TMEM18
PLEKHM3
NOL11
G6PC3
PSMA5
VPS35
GDAP1
ZNHIT6
PTPN11
UBL7
POLD3
ZHX1-C8orf76
ZHX1
PHB
ATXN1L
RAB5B
TMEM120B
PABPC1
TMEM129
TACC3
CHCHD3
BLOC1S1
MDM1
TIMM23
ZC3H18
RAB14
MSH3
DHFR
PDCD11
ATP5MD
PNPLA8
SYT5
UBE2G2
RSRC1
MAX
SLC25A16
HASPIN
ATP6V1H
MRTO4
EMC1
E2F8
ZMAT3
DARS2
CENPL
TASP1
VMP1
PTRH2
TRIP12
FBXO36
LIN9
FAM174A
FIS1
C5orf34
CFAP69
SART1
POC1A
ZBTB17
MFN1
MAP3K7
PPP1R12B
CCDC77
ERAL1
RNF115
POLR3C
PEX3
ADAT2
PHB2
CBWD5
SARS1
CRELD1
NEK11
ASTE1
HSPBP1
WDHD1
SOCS4
UBIAD1
MARS1
ARHGAP9
NME2
BBS1
GPN1
COPS7B
CCDC121
ASNS
DIABLO
BRCA1
TAF4B
ANAPC1
MELK
EBAG9
FRAT1
PPIH
KLHL20
TAF3
SLF1
KIAA0825
ADK
ZNF473
VRK3
SND1
SLC39A3
TCOF1
GOLGA3
PSMD9
HPD
SNAPC5