ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089495 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◣ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
TUBD1
RPS6KB1
TRIM37
NPAS4
PFDN4
BRIP1
BMP7
USP32
ARFGEF2
APPBP2
IQGAP3
ZNF217
TEX14
RAD51C
SKA3
MRPL57
SLC12A9
RNFT1
PARD6B
PPM1D
DZIP3
CIP2A
SIKE1
IQSEC3
HIPK1
BCAS4
DHX40
C3orf14
C12orf66
UNG
ALKBH2
CREBRF
NCOA3
FAM72C
SGO1
SRGAP2
FAM72A
TSR3
GNPTG
ZFPL1
CDCA5
TMEM262
METTL1
EEF1AKMT3
CYP27B1
DYNLRB2
CRBN
FBXO32
NCAPH
RNF166
CTU2
ZNF331
FANCI
CPLX2
SRGAP2C
FAM72B
TICRR
SRGAP2B
FAM72D
RAB22A
MOK
BARHL1
HTR5A
BLM
DSCC1
DYNC2I1
ATP6V1C1
ATXN7
CEP128
MED20
BYSL
MYBL2
ZHX3
HSF1
BOP1
SCRT1
UBE2C
TRIM33
NAGPA
KPNA2
XKR7
CIT
MTFR2
MIS18A
TTK
NET1
SAP30BP
RECQL5
UTP20
TROAP
VAC14
ZSCAN2
TRIP13
BRD9
TTLL11
VARS1
RRP15
MCM7
AP4M1
RMDN1
CPNE3
CCNA2
CCT2
SPNS1
NCAPG
MCM10
TONSL
POLQ
TOP1MT
WDR4
EXO1
PGBD5
EIF2D
KIF14
SMG8
USP14
ZFYVE1
TRMT61A
VRK1
GFPT1
FANCD2
POLR2J3
DCLRE1B
AP4B1
NEIL3
CCNG2
NOL8
CENPP
RACGAP1
TTF2
XRCC2
WASHC5
NSMCE2
DHX37
BRI3BP
SNAP25
ZNF688
SKA2
PRR11
RNF40
CCDC189
PRELID3B
RAD51
CSTF1
AURKA
BUB1
YPEL2
FAM227B
DTWD1
STOML1
PML
TBX2
SUMF1
MFSD1
LTV1
SGO2
DDX11
FBXO5
WASHC2A
MOCS3
DPM1
KLHDC4
BCAS1
SMYD5
OAZ3
MRPL9
BIRC5
RRP12
RPP40
PTRHD1
CENPO
CYB561
TEDC2
SPATA25
NEURL2
CTSA
NUP214
ZNF530
MDM1
KCNH6
C1orf54
APH1A
GRWD1
LIX1L
CCNB1
WDR3
GDAP2
TAF5
ATP1A1
IPO4
GTSE1
NOL6
ATG101
DNAJA3
INTS2
COG7
NOMO3
PDSS1
NOMO2
PHTF1
DUS2
DDX28
POC5
UBE3D
DOP1A
DEPDC1B
TSEN2
CKAP2L
CNOT3
NOM1
RECQL4
LRRC14
RAD54B
MRPS23
TBC1D30
GNS
UTP23
RUVBL1
AP4E1
PMS2
AIMP2
ADCK1
FAM174A
TADA3
ARPC4-TTLL3
ARPC4
CYC1
HMGB1
RABL2A
RTF2
ABCA5
SCFD2
PRMT6
ATAD2
REXO4
ADAMTS13
CENPA
NOTCH2
TRPM7
NUF2
DLGAP5
GTF2H3
EIF2B1
CCT5
ATPSCKMT
TMEM208
LRRC29
GGH
RAD18
RFC3
SRPRB
NEMP1
ZBTB9
THOC7
SPG7
PTPN1
GPR89A
UTP4
DERPC
CHTF8
ATP5F1E
KLF1
GCDH
ESPL1
NOL10
RAD54L
CDC14B
MAD2L1
STAT1
ZNF367
NTAQ1
TCF19
CCHCR1
MED13
CCDC146
PIF1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
EIF3C
EIF3CL
TFB2M
CNST
FAM13B
SMC2
DCAF4
SHC1
CKS1B
NME1-NME2
NME1
NAGK
EEF2K
TMEM186
PMM2
TBC1D31
OXR1
KCNMB4
VPS50
HEPACAM2
ZAR1L
BRCA2
TMEM249
SLC52A2
FBXL6
PUS7
HEATR5B
GPATCH11
LSS
NKX1-1
SLF2
FAM207A
CNPY3
MLYCD
PLCG1
PHLPP2
TTC27
HAUS7
CHUK
CLTC
SQLE
METTL2A
KLF10
RINT1
UBR5
EDC3
KAT2B
SLC25A19
SLC39A4
CPSF1
ERN1
MYO5C
ESD
PPP1R16A
FOXH1
FBXW8
ASB8
DLD
PRKAB1
NBPF12
CCDC137
GTPBP4
PRMT2
SPEF2
FIS1
KMT5A
PARG
HSPA5
NOP16
HIGD2A
CDK1
MFSD14B
KCND3
WDR46
PFDN6
CDK7
STYXL1
FANCC
CDC25A
PIGU
SYT5
ALAD
ANKRD28
C7orf26
STK36
RNF25
ARHGEF5
CCDC86
ATG16L1
MDM4
NCKAP5L
LSM14B
ZNF680
OVOL2
RHEBL1
LRFN4
WASHC4
RRP1
MYBL1
AP3B2
VPS13B
IDH3A
ARFGAP1
ZC3H3
TERF2
RRM2
KIF18B
MND1
POLR2K
FBXO43
PSMD12
USP10
DNAH7
DDX21
PSMB7
ZNF789
RABGAP1L
TAF13
NUP107
RNMT
FAM210A
ZNF212
TIMELESS
PPM1E
PSMA5
ZMYND8
C6orf89
SRD5A1
TBC1D13
L1CAM
SLC37A1
RSPH1
NUDT1
MRM2
METTL3
IFT88
RFC1
ZEB1
NBPF1
SLC25A26
MYL12B
KIF11
PPIL1
IMP4
CCDC115
ANKRD46
TM2D3
SPTLC1
TAMM41
PYCR3
SLC25A32
DCAF13
PIP4P2
LMTK2
C16orf46
C8orf33
DUS4L-BCAP29
DUS4L
COG5
UTP18
MBTD1
GALK1
CACYBP
WDR74
LOC101928764
CENPN
BICDL1
MRPL4
CSDE1
DPH7
CDT1
FANCA
CREBBP
URB1
PRCP
DDIAS
HEATR5A
USP15
CKAP5
ASCC3
KCTD13
STK3
CENPW
XRN2
AOPEP
ZSWIM9
LIG1
PCNX3
MAP3K11
RBM8A
SEC61B
ALG2
GPATCH4
HCFC2
GLT8D2
SFSWAP
SMIM5
GABARAPL2
IFRD1
HMGCS1
FAM214A
GPR89B
WDR77
ATP5PB
SCRN3
CIR1
XPO4
CNPY2
POLG2
VAMP3
RAD9A
RTKN2
ROPN1L
CCNB1IP1
PRPF3
ZNF706
G2E3
SYK
C16orf71
ANKS3
ACOX3
CYB561D1
NDUFAF6
TSFM
CCNE2
RBM28
GOLGA3
EIF3E
PAM16
ZNF16
DNA2
KNOP1
IQCK
CLCC1
TMOD3
CDK5RAP2
KIFC1
PLK1
GOLIM4
SLC25A40
DBF4
RFWD3
SPTLC2
VIRMA
LRRC37A3
ZNF778
EXOC2
SPC25
CCDC150
MTMR14
SH3BGR
LCA5L
POLR3F
DZANK1
NOMO1
TMEM120B
NBPF11
RUBCN
OTULIN
CDKL1
NUDT2
KIF24
INKA2
DDX20
TACO1
PUS1
RXYLT1
DYNC1I2
ECT2
CS
CDC25B
GOSR2
ACTRT3
MYNN
VANGL1
VAPB
ZER1
CRNKL1
CFAP61
BRMS1
B4GAT1
WDR61
TRUB2
COQ4
SERINC3
LARP4
FAM186A
CKS2
RAE1
ARRDC4
CHRNB2
HELZ
MNAT1
NAF1
ETS2
PBK
WDR62
THAP8
PRPF18
GPAM
DEPDC1
MFN1
VCPKMT
STX4
PREX1
ARPP19
KIAA1841
AKNA
MRC2
C12orf45
TBRG4
PARPBP
NUP37
EIF1AD
BANF1
MAPK8IP3
DENND2C
MTRNR2L8
CEP55
PLEKHM3
FANCE
CALML5
MTRNR2L2
MSH3
DHFR
HSDL1
DNAAF1
CDC20
SHQ1
TTLL5
ERG28
YIPF4
STRIP1
GNPNAT1
PPM1H
HARBI1
ATG13
C2orf50
YTHDF1
ZNF492
NAA25
THOC3
UMPS
TMEM183A
PDE4DIP
CPLANE1
NHP2
TASP1
RIOK1
CAGE1
OTUD6B
CENPBD1
C8orf76
PPRC1
ADAT1
MARS1
ARHGAP9
TCOF1
STAM2
TMEM258
FEN1
SLC35C2
EIF2B2
RPS29
ATXN1L
MAX
IQCG
RSL1D1
NDUFB2
CLBA1
LMLN
LRR1
TRIM45
NAP1L1
RPS23
ATP6AP1L
ATG14
ARMC2
NGRN
MLEC
SEC22A
IFT22
RASA2
LDLRAD3
TBC1D15
LTO1
ATP5MG
FRAT1
NCBP2AS2
NCBP2
PRKAR1A
REXO5
ERI2
VPS33B
SLC27A3
DEK
KIF2C
TEKT2
ADPRS
C20orf27
PDCD2L
PPP2R3B
SPAG1
ANGEL1
DGKZ
CBLL1
KLHL18
KIF9
ZNF696
FKBP3
FANCM
GLE1
RIDA
POP1
AZIN1
CEP112
SHCBP1
RBM48
PEX1
POLR2J2
SLC45A3
PIP4K2C
COX10
ZGPAT
ARFRP1
TMEM251
MOAP1
BRPF1
DPY19L4
NARS2
GNAI3
GMCL1
LACTB
NRAS
ENDOV
CDK5RAP1
NOL11
POLN
HAUS3
WDR47
RAB35
TRAP1
CTTN
NEPRO
KIAA0895
ANLN
AGFG2
CLSPN
STX16
DDX19A
PDXDC1
RMI2
UBE2G2
RRM2B
GOLGA5
MBTPS1
ZNHIT1
PLOD3
FBXO33
KLHL36
CAPZA2
IVNS1ABP
SLC35D2
THUMPD3
DECR1
MRPL44
FUBP3
CPOX
SLC12A7
CGRRF1
TRAIP
SKIV2L
NELFE
EXOC3L1
URM1
E2F4
TEX10
SLC35A2
CYP51A1
SLC27A2
ORAI2
RCN2
ZNF330
TOMM40
DPH1
RTN4RL1
HM13
CDK5RAP3
SAXO2
EFL1
RRP1B
HSF2BP
SPICE1
KATNIP
GTF3C1
SLC35A3
FITM2
SULF2
HSPA12A
ENO4
RASA4
ZNF229
EML1
YIF1A
TMEM151A
RHNO1
FOXM1
SSBP2
SND1
MRPS21
ADAR
MIGA2
C14orf28
NTSR2
NPM1
TCTN2
SNAPC5
ZNF107
CHFR
HERC4
MIIP
AUH
GPATCH2L
SUB1
SPATA17
GPATCH2
AXDND1
DDX42
CCDC47
PPP1R12B
TFRC
PCYT1A
RCCD1
RPS6KB2
UCKL1
PCLO
GATB
HEXA
CDIPT
TXNL4A
RBFA
LUC7L
PSMD2
FAM234A
GKAP1
ARL6
RETREG2
CNPPD1
SBNO1
DYRK1B
MRPL3
SEC22B
PUF60
COQ2
CCND3
FAM117B
SLC25A24
SF3B4
METTL17
TEX2
KBTBD8
STX6
PIP4P1
ZFAND3
PEX16
LARGE2
VTI1B
FAM210B
SLC9A8
OCIAD2
HEATR1
CFDP1
INCENP
RAB5B
FAM228B
SF3B6
CDC42SE1
MLLT11
WDSUB1
NBEAL1
TMEM94
WASHC2C
PLK4
TADA2B
CCDC96
ASPM
TMEM150A
POLR2J
TDRKH
RTTN
IFT57
EDC4
SENP5
KIFAP3
KIF6
RASA1
INSM2
CCNB2
SYS1
NDUFS3
KBTBD4
CHCHD3
HGH1
MON1A
RBM42
THAP10
LRRC49
GSPT1
SETDB1
GPAA1
EXOSC4
STPG3
NELFB
LRP10
FAM219A
DNAI1
RPGR
MRPL10
LRRC46
RNF19A
PRKCA
NPHP3
QSOX2
KDM5B
MPHOSPH10
MCEE
C5orf51
MXD1
SART1
RNF115
POLR3C
RPUSD1
CHTF18
CHCHD6
RPS27L
MMS22L
TCP11L2
U2SURP
LYSMD2
USP8
GARS1
PXK
TTC26
ANKRD42
PABPC1
METTL6
EAF1
EBAG9
LOC389831
VPS53
STRADA
ESRRA
MED9
CUL2
CHURC1-FNTB
CHURC1
SLC22A15
CLIP1
NOTCH2NLA
TRAPPC12
EIPR1
C11orf24
CLPTM1L
SUSD6
SNRPE
EEF1E1
RPIA
SPATA2
ZNF408
ARHGAP1
TAF3
NAA35
SPOP
POFUT2
POLE3
C9orf43
FIGNL1
GOLGB1
SUMO3
ABL2
NELFCD
UBXN11
SDAD1
RPF2
ZNHIT6
CCDC90B
PSMC5
FTSJ3
DNAAF2
VWA3B
GPSM2
EMC8
COX4I1
SLC35F5
NSFL1C
SLC25A25
TAF6L
NAIF1
KIF3B
RPL36AL
MGAT2
HINT1
TPX2
FAM185A
SLC35B1
ERAL1
TOPBP1
TF
ARL13B
PPP1R13L
POLR1G
PMEL
CDK2
PTCD1
CPSF4
TRAPPC10