ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089496 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◣ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

CNOT3
HEATR6
NPAS4
TUBD1
RPS6KB1
FRG2
PSMD6
NCAPH
BCAS3
PFDN4
ARFGEF2
COL23A1
TRIM37
PARD6B
APPBP2
SCRT1
BRIP1
SMG8
CRBN
MTRNR2L8
XRCC2
USP32
NCOA3
RAD54B
SFSWAP
HSF1
BOP1
DUX4
FRG2C
STMN3
RTEL1
DYNLRB2
PPM1D
OAZ3
MRPL9
UBE3B
MOK
ZNF331
ATXN7
RRP15
TTF2
CLTC
HIPK1
BCAS4
ZNF217
EPN1
TSR3
GNPTG
C3orf14
METTL1
EEF1AKMT3
CYP27B1
CPLX2
TFRC
MTRNR2L2
MSH3
DHFR
SUMF1
SAP30BP
RECQL5
TTLL5
ERG28
CCNA2
ARMC2
ATG14
WDR4
GALR1
IQGAP3
UNG
ALKBH2
TRIP13
BRD9
SRPRB
HTR5A
RNFT1
SGO1
OPRL1
LKAAEAR1
MCM7
AP4M1
NET1
XKR7
SIKE1
SEL1L
C8orf33
DCLRE1B
AP4B1
PRMT6
EIF3H
INSM2
RMDN1
SKIV2L
NELFE
CPNE3
PSMB7
TBC1D23
MOCS3
DPM1
RTF2
RNF40
CCDC189
UBE2C
NDUFAF6
CCNE2
POLQ
KPNA2
TEX14
RAD51C
IQSEC3
LTV1
ZFYVE1
TCTN2
BICDL1
SKA3
MRPL57
PTPN1
BIRC5
TROAP
BLM
UTP20
RRM2
TRIM33
NOTCH2NLC
DCAF7
SPNS1
ATP1A1
CREBRF
PRELID3B
NAA25
NAGPA
SPATA25
NEURL2
CTSA
DHX40
AP4E1
GABARAPL2
SLC12A9
CSTF1
AURKA
BCAS1
SGO2
TMEM186
PMM2
COG7
USP14
USP54
LRP8
SPTLC1
TACO1
GLRX5
PHTF1
MTPN
LUZP6
RUVBL1
EEFSEC
L1CAM
FAM240C
STX16
FBXO5
NME1-NME2
NME1
NTAQ1
VPS11
DUS4L-BCAP29
DUS4L
COG5
GHITM
EDC3
POLR2J3
NOL8
CENPP
RFC3
TELO2
PTX4
UBE3D
DOP1A
PPP1R16A
FOXH1
RAE1
CIART
DSCC1
LARP4
FAM186A
SLC35B1
SPPL2A
PIP4P1
QSOX2
METTL2A
METTL17
SPG7
SRGAP2
FAM72A
TRMT61A
GFOD2
MYO5C
CKAP2L
MIS18A
MYL12B
TRPM7
TRIM25
CMTR2
WASHC5
NSMCE2
EXOC3L1
THAP5
DNAJB9
E2F4
FANCD2
TOP1MT
RXYLT1
UTP18
MBTD1
ARSG
SLC16A6
WDR3
GDAP2
ZFAND2A
STPG3
NELFB
TSEN2
CDC14B
SURF2
SURF1
ZC3H14
FAM214A
SAXO2
EFL1
EIF3E
ADPGK
NAA35
FCF1
AREL1
MTFR2
FBXO32
PEPD
PRPF3
WDR20
HSP90AA1
CIBAR1
KLC1
HSDL1
DNAAF1
C6orf89
COMMD4
PPIL1
RECQL4
LRRC14
POLR3F
DZANK1
NUP214
PDXDC1
PDPK1
BMP7
CHD1L
PRKAB2
PPM1E
GOLGA5
ZDHHC24
ACTN3
THOC7
RABL2B
NUDT4B
MFSD1
NOTCH2
NUDCD1
C11orf49
SLC22A15
ATP6V1C1
TBX2
SPC25
NUF2
FANCI
C12orf66
RRP12
EXO1
FAM72C
DZIP3
CIP2A
NKX1-1
NEIL3
SRGAP2C
FAM72B
TICRR
SRGAP2B
FAM72D
GRWD1
CRNKL1
CFAP61
SCFD2
ZFPL1
CDCA5
BARHL1
DHX37
BRI3BP
TTC27
QTRT1
CCNB1
TMEM262
TTK
RAD51
RBM19
CCT2
TRMT1
NACC1
KIF18B
DLGAP5
CCDC86
SMYD5
CCNG2
NEK2
SMC2
UTP25
KIF20A
BRD8
RAD54L
LIN28A
ESCO2
SLX1B
SLX1A
MCM10
BOLA2B
BOLA2
NOL6
IPO4
WDR74
URB1
VARS1
NEMP1
WASHC2A
RTBDN
PGBD5
WASHC2C
RAD18
KAT2B
BOLA2-SMG1P6
PRCP
DDIAS
BUB1B
GPATCH4
DCAF4
C16orf71
ANKS3
RNF166
SHCBP1
SMIM17
CDC25A
PIGU
KLHL18
KIF9
CTU2
KIFC1
ACOX3
MAPK8IP2
RABL2A
DYNC2I1
C16orf46
VPS50
HEPACAM2
CYB561D1
KIAA0895
CEP55
KIF14
UFD1
CDC45
GTF2H3
EIF2B1
EIF2D
ANLN
USP2
CDC6
NBPF1
EBNA1BP2
CFAP57
MAD2L1
WDR46
PFDN6
CCNB2
CENPW
SKA2
PRR11
AGFG2
LZTFL1
DNA2
VPS33A
ZNF688
PLK4
AURKB
EXOSC5
BCKDHA
POC5
DDX49
COPE
RPP40
HCFC2
GLT8D2
SKA1
TADA2B
CCDC96
HMGB1
CYB5R4
FBXW9
ACTR6
TAF13
TTC26
MYBL2
MND1
RRS1
ADHFE1
CDK7
KIF2C
TSFM
NUDT15
CCDC146
VRK1
PPAN-P2RY11
PPAN
ANGPTL6
INTS7
DTL
SHC1
CKS1B
ESPL1
PBK
NOP16
HIGD2A
GTF3C4
DDX31
LOC101928764
COMMD9
CEP128
ASPM
CDK1
SLC37A1
RSPH1
TWNK
MRPS23
MRPL43
NUP107
KLF1
GCDH
RAB22A
TTLL11
ATAD2
GTSE1
TOMM40
CDC20
DDX11
RRP1
POLR1B
ZAR1L
BRCA2
PMS2
AIMP2
DYRK1B
NUDT2
KIF24
RBM28
MTRNR2L1
URB2
TAF5L
CEP135
NUDT1
MRM2
UGGT1
TMEM208
LRRC29
RACGAP1
KIF15
KIAA1143
NDUFV1
ATR
MARCHF8
NCLN
TRIP4
NOM1
ATG101
GATB
TRMT6
MCM8
AEN
FDX2
NCAPG
KLHDC4
EIF3C
UTP23
HSPA9
RHEBL1
PPRC1
ODF2
INKA2
TCF19
CCHCR1
PLK1
ZSCAN2
CDC25C
EIF3CL
DDX20
TONSL
PWP1
FBXL13
ARMC10
RBM48
PEX1
VAC14
LSM5
SSBP1
MED20
BYSL
UBXN11
SUPV3L1
KDM5B
PNPT1
KNOP1
IQCK
NHP2
STIL
LSG1
HAGH
FAHD1
NRAS
BBS5
WDR62
THAP8
BUB1
WIPI1
SNRPE
GPATCH3
PCOTH
MIPEP
ATP6V0D1
AGRP
HEATR1
DNAH7
DDX21
HEXA
LTN1
EEF1E1
POLR2K
FBXO43
POU2F1
DNAJC25-GNG10
DNAJC25
PNO1
AXDND1
NLE1
CLSPN
MRPL27
EME1
ZNF778
C12orf45
IPO11
FAM200B
CENPE
FBXW8
DPH2
ATP6V0B
RAD9A
DPH1
QTRT2
CCDC191
SLC25A26
TPX2
TBC1D30
YPEL2
TRAIP
TPH2
TFB2M
CNST
OS9
TEKT2
ADPRS
UBN2
PUS1
NPM1
USP30
TOP1
RNASEH1
ASF1B
BRMS1
CDCA8
C1orf109
VTA1
NMBR
FARSB
FAM24A
KNL1
ZGRF1
LARP7
GTPBP4
B4GAT1
THOC3
DUS2
DDX28
GTPBP10
GNS
TBRG4
SETD4
TSEN54
CASKIN2
TMEM150A
TRAPPC6A
BLOC1S3
GAR1
YIF1A
TMEM151A
TDRD7
MCOLN1
ECSIT
SDAD1
GFM1
TMED5
CCDC18
SULT1A4
SULT1A3
SLC25A19
CPEB4
CENPN
DIAPH3
POLR2J
ZC3HC1
PUM3
FAM227B
DTWD1
RTN4RL1
SMIM5
ZNF530
WDR61
SPCS1
GLT8D1
CENPS-CORT
CENPS
PRMT2
SHQ1
RPIA
ANAPC7
METTL2B
UBFD1
EARS2
SNRPD1
TOMM22
RGPD2
RGPD1
WFDC3
DNTTIP1
NOC4L
DDX51
ZHX3
HAUS7
NOMO3
ZBTB9
SPATA2
MMUT
CENPQ
TIMELESS
CFAP299
MPHOSPH10
MCEE
DIMT1
SYNJ1
RTKN2
NUP35
PRPF18
PARG
MKI67
PARPBP
NUP37
REXO4
ADAMTS13
GGH
DDX42
CCDC47
FLAD1
CENPM
RAD51AP1
C12orf4
KIF23
HBP1
TFIP11
CENPH
STOML1
PML
TMEM199
POLDIP2
MYBL1
PDSS1
TBC1D15
LMAN2
DEPDC1B
TRUB2
COQ4
CCDC150
NOL10
MDN1
RRP9
PARP3
ARHGAP11A-SCG5
ARHGAP11A
IREB2
DDX19A
RNASEH2A
PRDX2
ZSWIM8
CHCHD1
MRPS35
MRPL3
CCT5
ATPSCKMT
LIX1L
CELSR3
KLHL32
SLF2
DHODH
SERINC3
METTL3
POMZP3
THADA
FAM207A
DLGAP3
SPC24
SLC39A6
KLHL24
MTMR14
TRIAP1
RIOK3
DBF4B
TMEM249
SLC52A2
FBXL6
GPAM
SH3BGR
LCA5L
PRPF38A
ORC1
KCTD9
CDCA2
DEPDC1
MRPL4
GPR89A
HM13
CENPF
TPRN
TMEM203
NDOR1
UTP15
ANKRA2
ZNF696
NOMO2
PC
SPEF1
DPY19L4
TRMT61B
C1orf54
APH1A
STAT1
PSME3
HMGB2
FAM185A
ANAPC5
NUB1
ENDOV
ATP5F1E
NOL7
AVL9
KIF11
NARS2
SAR1B
NAT10
HEATR5B
GPATCH11
SECISBP2
DNAJA3
TOM1L2
DRC3
DDX46
IARS1
SEC13
TAMM41
FKBP3
FANCM
NOMO1
IMP4
CCDC115
NAGK
TIGD5
EEF1D
SNRPD2
QPCTL
OXNAD1
DPH3
NGDN
SEC22B
TOR1A
LSS
ATAD5
AP5Z1
MRM1
CALCOCO1
CRIP1
CFDP1
MNS1
GLE1
CHUK
HROB
FKBP1A
DYNC1I2
CNOT4
DYNLL1
PES1
EIF2S1
ATP6V1D
CNPY3
TEDC1
RNMT
FAM210A
C12orf43
SASS6
MARS2
NDUFAF4
C5orf51
XRN2
TMEM120B
RNF114
GNAI3
RPS29
EIF1AD
BANF1
ZBTB49
LYAR
INCENP
CLCC1
CFAP298-TCP10L
CFAP298
DPP3
WDR43
TMEM67
NEU1
PDZD11
KIF4A
CENPA
RECQL
GOLT1B
LTO1
PTRHD1
CENPO
SPEF2
GPR89B
COX14
OGDH
RBBP5
TEDC2
SYS1
NOLC1
SNAP25
ZNF367
RPL6
CYB561
METTL18
C1orf112
MCRS1
URM1
RPF2
INTS2
CDK5RAP3
CREB3L2
AARS2
MXD1
TMEM248
LRPPRC
NDUFS3
KBTBD4
GFPT1
ADAT1
SLC19A1
TRMT44
OIP5
NUSAP1
DBNL
ANKRD42
ASB8
AP3B2
MAK16
AOPEP
TMEM18
PIF1
ANAPC10
ABCE1
PYCR3
SMC4
IFT80
CDK5RAP1
PUS7
PALB2
DCTN5
IFT172
CKS2
ZNF408
ARHGAP1
GSN
ROPN1L
POLR2J2
HSPH1
LYRM4
FARS2
ADCK1
TDRKH
ZNF79
CDIPT
ZSWIM9
TUBB3
LIG1
RMI2
HSPA5
XPO5
POLH
PPIL2
KLF10
ATP5MG
RABIF
GNL2
PCNA
INIP
RHNO1
FOXM1
VPS45
TPRA1
CGGBP1
TAF5
INTS1
TTLL4
SUPT7L
SLC4A1AP
FRAT2
CRCP
NUFIP1
GPALPP1
ECT2
CDC37
LRRC59
PIMREG
CS
YEATS4
FPGS
DDX41
TMEM231
RAB37
TFPT
SRD5A1
PRPF31
SQLE
SSBP2
FAM161A
NDUFAF5
ESF1
RAB5B
CFAP410
SUGP2
ARMC6
STYXL1
CIT
MRPL1
PLEKHM3
NOL11
LSM12
G6PC3
PSMA5
VPS35
GDAP1
ZNHIT6
PTPN11
UBL7
POLD3
ZHX1-C8orf76
ZHX1
PHB
ATXN1L
C5orf34
PABPC1
TMEM129
TACC3
CHCHD3
RDH5
ITGA7
BLOC1S1
MDM1
TIMM23
ZC3H18
RAB14
PDCD11
ATP5MD
PNPLA8
SYT5
UBE2G2
PSMC2
DNAJC2
SHOX2
RSRC1
SARS1
MAX
SLC25A16
HASPIN