ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089499 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◣ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
HEATR6
PSMD6
BCAS3
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
PFDN4
IQGAP3
HTR5A
TRIM37
SKA3
MRPL57
PARD6B
USP32
APPBP2
ATXN7
SLC12A9
SCRT1
PPM1D
DYNLRB2
UNG
ALKBH2
ARFGEF2
IQSEC3
FANCI
KPNA2
NCOA3
ZNF217
DCLRE1B
AP4B1
BCAS4
CPLX2
BARHL1
BMP7
SAP30BP
RECQL5
TRIP13
BRD9
C8orf33
METTL1
EEF1AKMT3
CYP27B1
VRK1
NKX1-1
RAD54B
HIPK1
HSDL1
DNAAF1
FAM72C
C12orf66
MCM10
MYBL2
TTLL11
C3orf14
TRIM33
XRCC2
CNOT3
SMG8
KIF14
POLQ
DHX40
TSR3
GNPTG
SPATA25
NEURL2
CTSA
TRMT61A
AP3B2
NUDT1
MRM2
CSTF1
AURKA
HSF1
BOP1
XKR7
NOL8
CENPP
RNF166
CTU2
RFC3
FANCD2
SIKE1
BUB1
DUS2
DDX28
MTFR2
DZIP3
CIP2A
PGBD5
MOK
RRP15
SGO1
NAGPA
PHTF1
SRGAP2B
FAM72D
WDR4
TROAP
NCAPH
L1CAM
KLF10
RRM2
KAT2B
EIF3C
EIF3CL
TONSL
RNFT1
MOCS3
DPM1
FAM214A
LIX1L
SRGAP2C
FAM72B
CRBN
FANK1
EXO1
WASHC5
NSMCE2
MED20
BYSL
SARS1
KCNH6
CCNA2
GTF2H3
EIF2B1
CDIPT
EXOC6
TBX2
POLR2J3
LOC101928764
ZHX3
CCT2
TRPM7
TMED10
FBXO5
SKA2
PRR11
TSEN2
ATP6V1C1
PPP1R16A
FOXH1
METTL2A
ZFYVE1
THOC7
DSCC1
NOTCH2
VARS1
DNAJA3
TCTN1
RAB22A
INKA2
DDX20
AP4E1
BIRC5
TTK
EDC3
TBC1D30
GNS
TOP1MT
DYNC2I1
EIF2D
NEIL3
MRPS23
YPEL2
RTKN2
ADAT1
HSPA5
CCT5
ATPSCKMT
TMEM249
SLC52A2
FBXL6
NBPF11
TTF2
CHUK
FBXO32
LZTFL1
SGO2
CEP128
ATG101
RMDN1
CPNE3
ZNF517
SUMF1
UBE2C
SFSWAP
SQLE
AZIN1
EEF1E1
RABL2B
SRPRB
RCN2
IARS1
SPAG1
RRP12
ESPL1
INSM2
ZSCAN2
NDUFS3
KBTBD4
GABPB1
U2SURP
ATAD2
GABARAPL2
WASHC2C
MCM7
AP4M1
CREBRF
TCF19
CCHCR1
PPT1
USP14
ERN1
ZNF696
MYL12B
RAE1
COQ2
TSFM
MTMR14
CKAP2L
OAZ3
MRPL9
ARMC2
UBE3D
DOP1A
POLR2J
UTP23
CENPN
C1orf54
APH1A
CNTRL
C5
STK36
RNF25
UTP20
NEK11
ASTE1
QSOX2
DYRK1B
NUB1
CLTC
CCNB1
CDC14B
DCAF4
CYB561D1
SNAP25
GTF3C5
VANGL1
TTC27
WASHC2A
MAPK8IP2
STOML1
PML
GPR89A
PYCR3
TSEN15
WDR43
MRPL44
TICRR
RABL2A
NBPF1
NDUFAF6
CCNE2
VAC14
ZFPL1
CDCA5
TMEM262
PPM1E
NME1-NME2
NME1
IPO4
ZNF331
NET1
TRIP4
MED13
NUF2
RTBDN
GPR89B
ROPN1L
ZNF79
IKBIP
APAF1
ACOX3
NAA25
STX16
REXO4
ADAMTS13
TRMT44
ASNS
GET3
UMPS
RPS19
NAT10
NDUFB3
FAM126B
MYO5C
BICDL1
PPP1R12B
PRCP
DDIAS
RXYLT1
PDXDC1
ATXN1L
WDR35
RFX5
MTRNR2L2
MSH3
DHFR
VPS33A
KLHL24
PRELID3B
PRKAR1A
CENPBD1
BCAS1
SLCO4A1
AGFG2
NEMP1
C16orf71
ANKS3
SLC37A1
RSPH1
NUP107
PUS1
SPTLC1
DEPDC1B
TPTE
ATG14
UGGT1
ATP5F1E
TP53INP1
KIFC1
PLK4
STMN3
RTEL1
YIPF4
RAD51
PIGU
TACO1
FANCC
DHX37
BRI3BP
RACGAP1
AEN
NOTCH2NLC
GALK1
DECR1
RECQL4
LRRC14
DDX42
CCDC47
TRIAP1
LTO1
CDK5RAP3
SLC25A24
TOP1
DHODH
INTS2
MDM1
RINT1
TFRC
ZDHHC17
CFDP1
INIP
TUFT1
ZEB1
PREX1
CHRNA5
ESCO2
VPS50
HEPACAM2
CEP55
CENPH
RNF115
POLR3C
BLM
DLGAP5
LTV1
RBM48
PEX1
SPATA2
PSMD12
ATP1A1
NHP2
PSMB7
MXD1
MEA1
JMJD1C
RRP36
COL23A1
C12orf45
TMEM120B
BCAS2
NBPF12
MKI67
CNPY3
AOPEP
RRP1B
HSF2BP
TMOD3
TBK1
XPO4
CDC20
SLC35B1
GLRX5
PDPR
DPY30
EIF3E
PSMD4
NOL6
DDX11
SUPV3L1
DNAH7
C20orf27
PKMYT1
MED6
CPLX1
MND1
TMEM150A
TBC1D15
LMAN2
POLR2J2
CCDC77
ARRDC4
KDM5A
STRADA
SRGAP2
FAM72A
RNF114
EXOC3L1
E2F4
ARHGEF5
MARCHF10
GRWD1
LRPPRC
ANKRD46
NUP54
ZNF706
CCNE1
ABL2
SMC2
KIF20A
BRD8
ZNF367
POLL
DPCD
WDR74
ATR
KLHDC4
NPM1
TSEN54
CASKIN2
RNF40
CCDC189
NDUFV1
MFSD1
DDX21
ZGRF1
LARP7
SLC25A19
FRAT1
ZNHIT1
PLOD3
ZSCAN25
TCP11L1
RMND5B
WWP1
METTL6
EAF1
FANCE
NAA35
VCPKMT
CCDC88A
TRIM25
TRAPPC10
SF3B3
COG4
WDR46
PFDN6
MDM4
TBC1D13
ZNF622
LDLRAD3
INCENP
RPL6
PTPN11
VPS13B
CSRNP2
CMTR1
MMP24
MAP3K20
TMEM208
LRRC29
DIMT1
ECT2
ATG7
SLC35A5
ATG3
MON2
TEX10
SLC13A3
TP53RK
URB1
POC5
PCOTH
MIPEP
TMEM199
POLDIP2
DDX46
GFPT1
NOTCH2NLA
PIP4P2
SHCBP1
RPP40
WFDC3
DNTTIP1
SHOX2
RSRC1
NDUFAB1
CLPTM1L
KIAA1586
PRDX6
BIRC6
RPL36AL
MGAT2
CCDC86
HMGB1
PPAN-P2RY11
PPAN
ANGPTL6
PMS2
AIMP2
PLK1
PRPF18
HEATR5B
GPATCH11
SEL1L
HEATR5A
ABCF2
P2RY11
GSTO2
GPR107
FAM171B
FAM24A
DUS4L-BCAP29
DUS4L
COG5
RBBP5
PRPF19
UTP4
DERPC
CHTF8
ASCC3
CEP135
FBXW8
MRPL3
PTRHD1
CENPO
TEDC2
ZFAND2A
NME2
MXD4
AJUBA
KAT8
CAV2
RBM19
RAD18
ZNF688
C6orf89
NOMO2
RPS29
CENPA
SPPL2A
ZHX1-C8orf76
ZHX1
NOB1
THBS3
MTX1
LRR1
ASL
GLE1
SLC39A4
CPSF1
VAPB
NOTCH2NLB
PLCG1
GTSE1
BBS5
COMMD4
ZNF778
UBE3B
MELK
TADA3
ARPC4-TTLL3
ARPC4
NOP9
DHRS1
SLC7A6OS
PRMT7
PDCD6
IST1
RNASEH2A
PRDX2
WDR3
GDAP2
NGDN
THAP5
DNAJB9
IFT88
SPICE1
ANKRD40
SUSD6
AMMECR1L
KDM5B
ANGEL1
TBL3
LSM8
SLC25A44
FIGNL1
FSD1L
ZNF23
AUH
EEF2KMT
CCNG2
C16orf46
UBE2G2
PFDN5
MYG1
PPP2R3B
B4GALT7
BCL7B
CTNNAL1
MIGA2
LRWD1
ALKBH4
PAM16
PSMC6
RUVBL1
COG7
NAGK
TMEM67
GOLIM4
CLBA1
DSE
CD2BP2
TSPYL4
RRP1
YIF1A
TMEM151A
SMIM5
CCDC150
DDX19A
EIF2S1
ATP6V1D
USP15
PDE4DIP
SENP5
PLEKHM3
SAXO2
EFL1
PCNX3
MAP3K11
NXF1
ZNF3
MRNIP
STMN1
TATDN2
KIF21A
ZC3HC1
TOMM22
SEC22B
FAM174A
DCAF7
GFOD2
ZC3H3
WDR53
FBXO45
FBXW2
TEFM
ZMYND8
H3-3B
RHEB
BSN
NDUFS6
MRPL36
DAP
FZD6
TADA2B
CCDC96
NOMO3
DPY19L4
PDCD11
ATP5MD
CCDC59
PRMT6
STRIP1
KIAA2026
FAHD2A
RPL14
SLC27A2
MESD
NSG2
NTAQ1
MYBL1
SH3BGR
LCA5L
MAX
ADPGK
COMMD2
COPS3
PI4KB
CDK1
EIF1AD
BANF1
CKS2
ZC3H18
NCBP2AS2
NCBP2
ALAD
TM2D3
DENND2C
PGS1
PCMTD1
CENPW
PPRC1
RPSA
NOC3L
MLYCD
NIPSNAP3A
MRPL2
KLC4
C7orf57
TUT7
RASAL2
NOL11
TAF4B
XPC
LSM3
CDT1
CALU
PEBP1
TCTEX1D2
OTULIN
CEP350
SPC25
NRAS
CPEB4
TTLL5
ERG28
RHNO1
FOXM1
STYXL1
CDC25B
DGKZ
NDUFB2
LMNA
TMEM167B
SLC29A2
MEX3A
MIS18A
RBM28
DNAJC25-GNG10
DNAJC25
TTLL4
RIDA
POP1
FAM117B
PGD
CDK9
NUDT2
KIF24
FAM227B
DTWD1
FKBP3
FANCM
TIGD5
EEF1D
SPATA33
RRM2B
PITX3
GBF1
WDR20
HSP90AA1
UQCRC2
VKORC1L1
STXBP3
CDC42BPG
KIF18B
UFD1
CDC45
PTPN1
E2F8
DERL1
TMEM258
FEN1
ELP1
ABITRAM
CSDE1
SURF2
SURF1
PSME2
RNF31
BCKDHB
CDC42SE1
MLLT11
BZW1
FRG2
NOM1
LSS
ADCK1
GDAP1
ZNF473
VRK3
MFSD5
DHX16
HGH1
TMEM183A
ZNF680
SLC25A36
SLC39A9
ERH
RHEBL1
THOC3
RAD51AP1
C12orf4
PCNA
LRRC47
HJURP
USP10
ZNF148
CACYBP
CALB1
PDPK1
ZNF641
NTNG1
DNA2
RNASEH1
POLR3F
DZANK1
CIT
PIAS3
DNAJC21
DYNC1H1
SLX1B
SLX1A
BOLA2B
BOLA2
SPNS1
HCFC2
GLT8D2
SYS1
SRD5A1
GPN1
CCDC121
FAM161B
COQ6
NUP160
KMT5A
PFDN2
NIT1
DYNLL2
ZBTB26
ADAMTSL4
GKAP1
SNRPE
SLC25A16
RHBDD2
CHRNB2
CFAP54
TAF1C
ADAD2
GPATCH1
FANCG
STK3
ZFAND3
GLRX2
PITPNC1
ZNF410
BAZ1B
ITGB4
APRT
KLHL18
KIF9
PPIL1
SKIV2L
NELFE
MCCC1
ATP5MF-PTCD1
ATP5MF
UNKL
SPATA17
GPATCH2
MRPL28
PRTG
CENPE
EBAG9
SSNA1
ANAPC2
HSP90AB1
NCKAP5L
TRMT5
SLC38A6
POLG2
UBR5
WDR25
WARS1
TECPR1
PDIA5
RNF19A
C14orf28
RELB
ACBD3
UBQLN1
HAGH
FAHD1
PDSS1
DARS2
CENPL
NGRN
RCE1
SLC39A11
FBXO33
CYB5B
RBM45
PDE11A
CAMSAP2
HDAC2
USP45
ZNF492
BUB1B
CDC25A
POLR1B
RAD9A
ZBTB9
TRMT61B
NOL7
SMC4
IFT80
PDCD2L
IDH3A
ZNF726
MTPN
LUZP6
POLN
HAUS3
HELZ
SWI5
GOLGA2
IFT22
PMPCB
STIP1
USP8
CLCN7
ERCC3
MROH1
RPN2
MROH8
EHBP1
PIEZO1
TENT2
FAM122A
LACC1
CCDC122
TMEM231
TASP1
RTN4IP1
QRSL1
ETFDH
C4orf46
RWDD1
ZNF383
C2CD2L
IQSEC1
SUCLG1
DLD
DDX23
LIME1
NDUFC2-KCTD14
NDUFC2
SLC2A4RG
ABCA5
MCM3
PRPF3
KANSL2
TRNT1
DHX9
SOAT1
CUL7
IFT74
PLAA
FDX2
METTL3
LARP4
FAM186A
LRFN4
MVK
ALG8
EEF2K