ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089497 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◣ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

HEATR6
BCAS3
TEX14
RAD51C
TRIM37
PSMD6
NPAS4
HTR5A
PFDN4
SGO1
NCAPH
SKA3
MRPL57
KPNA2
BRIP1
IQGAP3
TUBD1
RPS6KB1
SLC12A9
USP32
IQSEC3
TROAP
FAM72C
SRGAP2B
FAM72D
DYNLRB2
CCNA2
UNG
ALKBH2
DLGAP5
TRIP13
BRD9
DZIP3
CIP2A
SRGAP2C
FAM72B
XRCC2
BMP7
ARFGEF2
UBE2C
CKAP2L
METTL1
EEF1AKMT3
CYP27B1
RAD54B
OAZ3
MRPL9
BIRC5
SMC2
BARHL1
SRGAP2
FAM72A
NEMP1
TICRR
DCLRE1B
AP4B1
FANCI
APPBP2
KIF14
MYBL2
SIKE1
UTP20
FANCD2
SCRT1
POLQ
PARD6B
VRK1
NET1
EDC3
RNFT1
NOL8
CENPP
ZNF688
RRP15
FBXO5
NUF2
ATXN7
DHX40
NEIL3
SMG8
MCM10
SAP30BP
RECQL5
C12orf66
CEP128
PRCP
DDIAS
MTFR2
EXO1
TTC27
SPATA25
NEURL2
CTSA
RNF166
CTU2
TOP1MT
HMGB1
C8orf33
NCOA3
TONSL
KLHDC4
HSF1
BOP1
ZNF331
POLR2J3
MIS18A
DSCC1
SKA2
PRR11
SNAP25
CCT2
TRMT61A
ZAR1L
BRCA2
SUMF1
WASHC5
NSMCE2
C3orf14
RAD18
PPM1D
CCNB1
ZFPL1
CDCA5
TMEM262
CSTF1
AURKA
RTKN2
BCAS4
TTK
CPLX2
L1CAM
ZNF217
CYB561D1
CDC20
RFC3
FANCC
CRBN
CCDC86
MAD2L1
DUS2
DDX28
FBXO32
TEDC2
HIPK1
PKMYT1
WDR4
TTF2
MOCS3
DPM1
SHCBP1
TCF19
CCHCR1
EIF2D
MED20
BYSL
C1orf54
APH1A
NKX1-1
RACGAP1
LIX1L
ZHX3
TSEN2
MOK
XKR7
RHEBL1
VARS1
PHTF1
SGO2
VPS50
HEPACAM2
SPC25
ACOX3
DEPDC1B
STOML1
PML
TCTN2
RAB22A
NTAQ1
ZNF778
SPTLC1
PPP1R16A
FOXH1
BCAS1
AURKB
TOP1
ZFYVE1
MND1
NDUFAF6
CCNE2
DYNC2I1
INKA2
DDX20
NAA25
TBX2
TAF13
CYB561
ATP1A1
BLM
NAGPA
RABL2B
KLF10
ZNF696
IPO4
CCDC146
BUB1B
METTL3
THAP10
LRRC49
ESCO2
LTV1
NUP107
TSR3
GNPTG
ZSCAN2
MKI67
DYRK1B
NCAPG
AP4E1
CLTC
MRPS23
RBM19
RMDN1
CPNE3
CENPN
PLK4
RTF2
DNAJA3
ATXN1L
RHNO1
FOXM1
RNF40
CCDC189
SKA1
RUVBL1
PPAN-P2RY11
PPAN
ANGPTL6
GGH
P2RY11
CREBRF
ATP6V1C1
PLK1
LSG1
GTSE1
EEF1E1
DHX37
BRI3BP
C16orf46
RPP40
VAPB
THOC7
CENPW
NRAS
MTMR14
NBN
TSFM
RAD54L
NUDT1
MRM2
TACO1
NOL6
COG7
CHRNB2
SCFD2
SLC25A19
PPM1E
TBC1D30
GNS
NDUFV1
CLCC1
AP3B2
ASNS
HRH3
FKBP3
FANCM
WDR74
ESPL1
ASPM
RRP1
SMYD5
QSOX2
TTLL11
YPEL2
ERN1
KIFC1
LOC101928764
MLYCD
PGBD5
SHC1
CKS1B
UBE3D
DOP1A
KCNH6
GTF2H3
EIF2B1
FAM227B
DTWD1
ANAPC7
SEC22A
HSDL1
DNAAF1
EIF3C
EIF3CL
REXO4
ADAMTS13
NGDN
PYCR3
PLCG1
NEK2
CCT5
ATPSCKMT
PIP4K2C
MXD4
DDX49
COPE
AMIGO1
UGGT1
BICDL1
SPEF2
GABPB1
PRELID3B
GOLGA3
BCAS2
TRIM33
MYBL1
CRIP1
TEDC1
NEK11
ASTE1
MTPN
LUZP6
AGFG2
RRM2
E2F8
INTS1
COMMD4
CDT1
KIF18B
PDZD11
KIF4A
SPNS1
DUS4L-BCAP29
DUS4L
COG5
CDK1
ZBTB9
HCFC2
GLT8D2
RAD51
ATAD2
SNRPE
SMIM5
NAA35
VAC14
RABL2A
FAM214A
NME1-NME2
NME1
DSTYK
GPATCH4
SLC37A1
RSPH1
DDX11
SLC25A26
PIGU
RABIF
TPRA1
MCM2
KIF20A
BRD8
PRKAB1
DCAF4
HAUS7
SUV39H1
PIMREG
CIT
TEX2
RPL30
KAT2B
SFSWAP
PRMT6
PTPN1
DARS2
CENPL
MFSD5
ASF1B
FDX2
HEATR1
LMAN2
PTRHD1
CENPO
PREX1
UTP23
ZNF367
PALB2
DCTN5
PHLPP2
METTL6
EAF1
TMEM249
SLC52A2
FBXL6
ZBTB49
LYAR
C16orf71
ANKS3
NOM1
ZNF726
ZMYND8
BUB1
NOTCH2NLC
TRPM7
SEL1L
COQ2
SDAD1
NDUFAB1
OSGIN2
GABARAPL2
DHODH
TMEM231
TASP1
SRPRB
TMEM186
PMM2
SLC35B1
ADCK1
METTL2B
STMN3
RTEL1
RAD51AP1
C12orf4
CHUK
NOL11
MDM4
MTRNR2L2
MSH3
DHFR
ATG14
EXOSC5
BCKDHA
METTL2A
MCM3
CCDC150
TWNK
MRPL43
TPRN
TMEM203
NDOR1
URM1
NOMO3
NOMO1
CEP55
PDXDC1
ARFGAP1
POLR1B
CENPE
IARS1
DERL1
RFX5
GPR89A
ARSG
NOB1
SLC16A6
RXYLT1
AARS2
ARRDC4
MCM7
AP4M1
RNASEH1
HM13
HASPIN
NBPF11
KNL1
LRPPRC
TMEM258
FEN1
PIP4P2
GPR146
SLC25A44
SLC39A4
CPSF1
OXR1
RAB35
PSMB7
EIF2S1
ATP6V1D
AEN
SERINC3
TUBB3
TCOF1
SAAL1
MRPL27
EME1
ATP5F1E
RABEPK
CDK5RAP2
ORAI2
ARMC2
TIMELESS
SEC13
DENND2C
OLA1
GRWD1
CDC14B
RNF114
INTS2
PPP1R12B
RSL1D1
GTPBP4
GPR89B
LAMTOR1
HSPA5
NOTCH2NLA
SELENOS
TSEN54
CASKIN2
GFUS
DNA2
AOPEP
ZC3H18
PPP2R5C
CORO1B
PDSS1
ECT2
SPAG1
GTPBP10
PES1
EIF3E
ZC3H3
ABCA5
CHFR
ATG101
MRPL3
WDR3
GDAP2
SYT5
TP53INP1
KIAA1586
MFSD1
OS9
SLF2
PABPC1
C20orf27
POLR2J
PRPF18
RPF2
FANK1
PRIM2
RTBDN
MAPK8IP2
GOLGA5
SETDB1
KLF1
GCDH
DYNC1I2
ANKRD46
SLC27A2
SLX1B
SLX1A
BOLA2B
BOLA2
CDC25A
NUDT2
KIF24
PARPBP
NUP37
LIN9
RNF115
POLR3C
RPUSD1
CHTF18
SF3B4
WDR20
HSP90AA1
SMAGP
ITGB4
RECQL4
LRRC14
TMOD3
TMEM208
LRRC29
STIL
NOTCH2
PDE8A
PI4KB
RRP12
TTC26
CEP135
THOC3
CENPH
ADAT1
TMEM129
TACC3
KMT5A
STX16
MRPS35
YEATS4
SARS1
TOPBP1
TF
C14orf28
RBM28
USP14
NEUROD4
TRAIP
SPATA2
UMPS
RPL32
XPO4
ARHGEF5
MRPL1
ASB8
ZHX1-C8orf76
ZHX1
CDC25B
RRM2B
DPH7
SPATA33
EDC4
CSRNP2
FRAT1
ENTPD5
BBOF1
RPS26
FIS1
RIPK2
CYC1
EEF2K
URB1
RIDA
POP1
MED13
TTLL5
ERG28
SSBP1
DDX19A
PWP2
LOC102724159
CCDC59
TAMM41
RMI2
CNTRL
C5
SLC22A15
BOLA2-SMG1P6
AXDND1
BZW2
CCNB1IP1
ANKMY2
HELZ
NBPF15
CLCN7
ERGIC1
QTRT1
HSPA12A
ENO4
PNPT1
CNPY3
GOLIM4
ING4
TMA16
STK3
LTN1
RCE1
FAM91A1
SPDL1
HAGH
FAHD1
POLR2K
FBXO43
PUS1
SNAPC5
NSUN5
C7orf50
GCN1
LSM5
QTRT2
CCDC191
ZC3HC1
ANAPC5
AVL9
NUFIP1
GPALPP1
SAXO2
EFL1
RAE1
CCNG2
C12orf45
GFM1
PFDN5
MYG1
ALAD
DBR1
NIPSNAP3A
PCMTD2
C6orf89
PRMT2
CDIPT
PRKAR1A
SGTB
NLN
POLE2
KLHDC1
PBK
FAM24A
KLHL32
NDUFAF4
CCDC34
ANGEL1
NDUFB2
POLG2
XPOT
INSM2
NARS2
CGGBP1
ABCF2
C3orf38
PXMP2
POLE
VTA1
NMBR
RUNDC3B
FLCN
WDR46
PFDN6
NOP16
HIGD2A
CENPF
SKIV2L
NELFE
PRPF19
RFC1
ZNF706
ALG1
DLD
VPS33A
FBXW9
OSGEP
APEX1
FBXW2
RIF1
CNOT3
MYL12B
ARHGAP11A-SCG5
ARHGAP11A
NME2
GTF3C5
CCDC90B
CNPY2
GDI2
GNPNAT1
MRPS21
P2RY2
CIBAR1
FARSB
MMUT
CENPQ
CKS2
FPGS
ZNF888
WIPI1
PLEKHM3
IKBIP
APAF1
GINS1
COPB2
KIAA0895
ANLN
LZTFL1
ZNF79
PHB
MAX
TATDN1
NDUFB9
VANGL1
TBL3
TADA3
ARPC4-TTLL3
ARPC4
MAPKAPK5
SARNP
ORMDL2
ENDOV
AZIN1
TMEM192
NOL10
PDCD2L
CALB1
ACTR6
NHP2
DIMT1
ING3
ZNF517
CEP72
CARMIL3
TBC1D15
CFDP1
MXD1
VMP1
PTRH2
RHBDD2
ZNF622
NUP205
CLBA1
IMP4
CCDC115
GLE1
VPS13B
MTHFD1L
NBPF12
MCCC1
GCH1
GPR135
RNASEH2A
PRDX2
PEBP1
DCXR
FAHD2A
ATXN3
UQCRB
TRMT1
NACC1
NBPF1
NOMO2
WDR43
CREB3L2
ATP5MG
SPPL2A
STYXL1
ATG7
NCKAP5L
SMC6
GEN1
SLC7A6OS
PRMT7
EMC2
SLC26A9
COMMD9
PCOTH
MIPEP
ATP6V0D1
AGRP
ROPN1L
POLR2J2
LOC389831
PAM16
SPRYD3
DMXL2
DCK
WASHC2A
FBXW8
PRC1
KRR1
ZNHIT1
PLOD3
PMS2
AIMP2
C5orf34
SPICE1
THUMPD3
WDR61
NOC4L
DDX51
TRIAP1
DEPDC1
CENPA
ATP5MF-PTCD1
ATP5MF
ODF2
PPIL1
IDH3A
AUH
CCNB2
BRMS1
B4GAT1
TBRG4
STAT1
FCF1
AREL1
CDK5RAP3
DBNL
PIF1
LYSMD2
RCCD1
MBTPS1
TMOD2
MED10
GLG1
MRPL28
TFIP11
NGRN
HACL1
BTD
SMARCC1
SLC31A1
FKBP15
TPTE
MCOLN1
WDR35
SURF2
SURF1
ATP9A
GRB14
TEX10
PSMD4
TERF2IP
KARS1
RPIA
CMSS1
RPSA
VTI1B
PDIA6
MAPK8IP3
ADAM17
WDR93
PEX11A
PDPK1
PPRC1
GFOD2
MSTO1
KATNIP
GTF3C1
FANCA
VKORC1
POC5
GTF3C4
DDX31
SHQ1
VPS45
NUDCD1
RRP8
ILK
SPTLC2
MYO5C
EXD2
GSTP1
TMEM121B
KRT3
SASS6
CRELD1
RBM8A
NXF1
METTL17
SENP5
TCTN1
NANS
SPEF1
SYS1
TRMT44
DCAF7
SRSF7
SURF6
IFT22
RARS1
KLHL36
UPF2
IBTK
SECISBP2
TMEM67
SUPT7L
SLC4A1AP
SUGP2
ARMC6
LIN28A
TRMT61B
POLR3F
DZANK1
ZNF408
ARHGAP1
CSDE1
MPHOSPH6
DNAL1
DHX15
TEP1
KCNC1
S1PR3
C9orf47
SMC4
IFT80
DNAJC9
MACROD1
CCDC28A
GPATCH2L
FICD
CRNKL1
CFAP61
TMEM18
RAB5B
ERAL1
PSMB4
ZNF131
GOLGA1
C2orf50
DLGAP3
NDUFS3
KBTBD4
SRD5A1
LCMT1
NTMT1
MRPL38