ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150457 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◣ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MAP2K2
PTPN4
COQ9
CIAPIN1
NAA35
ECHS1
STXBP4
COX11
TMEM209
SSMEM1
PBLD
HNRNPH3
MARCHF7
PUF60
MAP10
SKA3
MRPL57
BTBD10
DENR
FAM200B
QRICH1
AKAP11
TIPIN
TAS1R1
NOL9
RPL12
LRSAM1
ZZZ3
RPL17-C18orf32
RPL17
PRDX1
LUC7L2
ARF3
NCAPG
UHRF2
ERCC6L2
NOP14
GRK4
RFC5
VDAC3
ANKFY1
SH3GL1
CHAF1A
TUBGCP5
TTC23
LRRC28
NCOA4
RPL10A
MAD1L1
CDC5L
SLC25A11
RNF167
COPB2
XPC
LSM3
SMIM10L1
PRH1-TAS2R14
ERGIC2
ATF2
EIF5
WDR73
NMB
PURA
RPS6
SUPT5H
CAND1
RPS19
TMEM18
CFAP70
ASXL1
SLC26A8
MAPK14
RBM15
CDK12
ETFA
PSMD5
STYXL1
SLC15A4
LAMP1
RPS11
MLX
COASY
FSIP1
PXMP2
POLE
FAM135A
DBR1
IREB2
SLC25A4
TMEM79
SMG5
HERC1
FASTKD2
RPS28
NDUFA7
ZFP91
LPXN
NAA38
TMEM88
CYB5D1
SRCAP
LOC730183
TAOK1
MMS22L
BANP
MICOS10-NBL1
MICOS10
SEPTIN7
PPP4R3B
CUL3
SRSF10
NOL11
STRIP1
EFHC1
RPL27A
RNPC3
WDR27
C6orf120
DNAJC27
DARS1
MYEF2
CTXN2
MATR3
SEC22C
NKTR
AKAP1
TMCO1
SCAMP5
MAK16
RAB33B
CNP
HSBP1
SPDL1
KAZALD1
RPL7A
MED22
SUGP1
MAU2
GPATCH3
JOSD2
ASPDH
CDC20
HSPA4
SHPRH
UBR3
METTL5
CEP350
HSPH1
SEC62
CCNC
KIAA1191
ARL10
ZNF346
MAP3K7CL
CCT8
SPEGNB
GMPPA
GAS8
DBNDD1
UBE2D3
CD2AP
SLC12A2
KIF5A
DCTN2
GLCE
SPAG16
RC3H2
POLDIP3
FAM76A
SIPA1L1
SNX5
MGME1
HSD17B8
SLC39A7
RXRB
GPBP1
ADAT1
MPC2
DCAF6
C6orf89
ZBTB2
LTV1
SPRTN
EXOC8
ATF7-NPFF
ATF7
PDRG1
YOD1
PFKFB2
RCC1
RPS15
NFYC
ZYG11A
NANP
MED1
TMEM245
AGA
HASPIN
C5orf24
MRPS7
GGA3
IFRD1
ZNF317
IKZF5
ACADSB
THAP1
ASH2L
DDHD2
NSUN3
DHFR2
USP54
RBM26
RELCH
PIGN
EHD1
RBPJ
KIN
ATP5F1C
ZFC3H1
THAP2
INTS13
FGFR1OP2
SRP19
WDR6
MFSD8
ABHD18
TADA3
ARPC4-TTLL3
ARPC4
VMAC
NDUFA11
LIN7C
MBTPS1
CCNJ
ZNF414
SMARCA5
ZNF850
POP7
ZCCHC14
C1orf74
EIF4A3
GRWD1
YY1
TGOLN2
MICU2
RPS7
WDR77
ATP5PB
MAP3K7
CSDE1
ICMT
DHX37
BRI3BP
ZNF582
SAXO1
RRAGA
INKA2
DDX20
CHUK
NPTN
SMNDC1
SMC4
IFT80
UBALD1
TRIM37
IMP3
DNAJA3
ANKRD13C
ERICH6
SLC35B4
MAGOHB
CCNT1
AHCTF1
DNAJB4
FUBP1
POLR2E
ATF4
PPM1G
ZNF136
AGBL3
HAUS5
ZNF286A
SLC39A9
ERH
ZNF219
TMEM253
GDI2
PHF12
SEC63
AGL
AURKAIP1
CCDC77
PAXBP1
MRPS18C
HELQ
GORASP2
PIGW
MYO19
METTL16
PDPR
EIF4A2
RPL26
LSM14A
ATAD3A
ETF1
RMI1
HNRNPK
ADNP
BZW1
USP47
UBE2D2
CHURC1-FNTB
CHURC1
GPR19
MRPS18B
ABCC10
SRRT
MRTFB
TTC32
PCMTD1
CLPTM1
DNTTIP2
SF1
ZKSCAN2
RICTOR
RNF151
RPS2
ACTRT3
CENPB
CDC25B
ACCS
IFT46
TOPORS
SMIM27
THADA
SMG7
DSE
TSPYL1
POLR2B
NOA1
PIH1D1
ALDH16A1
NPRL3
NRBF2
SETD5
SMDT1
USP39
C2orf68
BCAS3
CLP1
AP2B1
SMARCD2
INTS9
HMBOX1
GRB2
CNPY2
NFATC3
CENPC
SLC25A26
ZNF614
APTX
RPS15A
KBTBD6
FZD6
TMEM183A
YIPF3
POLR1C
CREBZF
NOP16
HIGD2A
CUL5
TARDBP
ZNF566
C22orf34
PMF1-BGLAP
PMF1
ZNF420
MOB1A
MRPL12
SIRT5
TBC1D5
TMEM127
CIAO1
MTFR1L
TAB2
GSTO2
SLC25A28
FAM50B
RFC3
ASNSD1
ASDURF
PPP1R12A
ABI1
GRAMD2B
PTPN1
GID8
DIDO1
PPP1R2
PSMB2
EXOSC10
GGH
ANAPC4
SLU7
PTTG1
H3C15
H3C14
H2AC19
H2AC18
PPIL3
NIF3L1
CYB561D1
DMXL1
ZBTB25
ZBTB1
ZFP30
VMP1
PTRH2
C20orf27
ZNF559-ZNF177
ZNF559
SENP7
RAB1B
NMRAL1
HMOX2
PNN
TRAPPC6B
BCLAF1
SPATA33
ZNF790
ZNF345
NBPF11
FUS
UNG
ALKBH2
NBPF12
SAP18
FAM71E1
EMC10
DZIP3
CIP2A
DDX19A
SLC35E2A
RPS3A
GGNBP2
TAF1D
C11orf54
TMEM107
LSM8
RPP38
SETDB2
CAB39L
PARPBP
NUP37
TSPYL4
PSMD2
HERPUD2
RAPGEF6
PIK3R2
CDIN1
HDAC10
CACYBP
PTGR2
SMC5
GOLGA8B
RAMAC
ITGB1BP1
CPSF3
NPM1
RBM4B
NCL
NUDT2
KIF24
CBWD5
CBWD3
PSENEN
LIN37
FOXO3B
SUGT1
UBE2H
ZWILCH
RPL4
MTRNR2L2
MSH3
DHFR
GGA1
SREK1
LRFN3
MRE11
ANKRD49
FKBPL
ATF6B
CHIC2
CBWD6
KPNA2
SNRPC
PPP1R42
OGDH
HSPA12A
ENO4
COPS3
PDS5A
RACK1
REV3L
SMARCAL1
SLC35E2B
PACS2
BRF1
WASHC4
NUCKS1
FAM122A
PHF5A
ACO2
TROAP
SVIP
MRPS14
SAMD8
DUSP13
BUB1B
UPF3A
ATP5MC1
KSR2
CLK3
TUT4
TLK1
RPL23A
RAB34
ERLIN2
SSH2
KCNAB3
CNTROB
TRA2A
STK38L
IFT74
NOC4L
DDX51
MRM3
GLOD4
SNRNP70
NSRP1
CCNG1
CNNM2
INO80
SRSF5
THAP7
RSL24D1
ZFHX2
THTPA
SLC41A3
CLEC11A
RPL23
PPOX
EIF3L
ANKRD54
CAMK2D
TXNL1
TFRC
ZDHHC5
MTRF1L
PDE12
SMC1B
RIBC2
NAA60
ZNF500
MTHFD1
TCTN1
CCT5
ATPSCKMT
CD320
MYSM1
ZNF512B
COQ2
WRNIP1
RAD23A
MINK1
TCERG1
GCA
BCAS1
MTRNR2L8
DRG1
C3orf62
SBNO1
CCNH
MAFF
AP4E1
PRKDC
MCM4
MRPL4
POLR1H
PEX14
DFFA
RPGRIP1L
FTO
FBN1
MAPKAPK5
ARHGAP35
RBM18
MRRF
SEC61A1
SLC25A33
GATM
FOXK2
ACAD9
DDX42
CCDC47
SCAMP3
ATP9B
PIBF1
DIS3
MAMDC2
KIF18B
RPS29
LARS1
MTRNR2L1
WDR59
NUP214
ACTA2
PEBP1
MAD2L1
ZCWPW1
MEPCE
SAR1A
HELLS
NRL
DCAF11
RBM42
TEX9
WWOX
SCAMP4
ADAT3
FADD
AFF4
C1RL
PHB
CYC1
CHST12
SPC25
NUDT5
CDC123
SSNA1
ANAPC2
RALBP1
CWC25
NOC3L
PEX11B
HIBCH
VIPAS39
AHSA1
SMARCC1
SMIM4
NT5DC2
PTGES3
NUDT19
SEC31A
THAP9
ZNF155
POU4F1
CNOT3
EP400
LANCL2
NANS
TTC3
PIGP
CETN3
SLFN12L
ZNF547
TRAPPC2B
ANXA7
SPTSSA
CAPN7
LOXL3
DOK1
SYNGR2
ADSS2
ZNF302
ZBTB37
RAB11B
CARMIL1
MX1
ILF2
EIF2AK2
CCDC86
RGPD2
RGPD1
AKIRIN1
SIVA1
CCDC59
TBC1D17
AKT1S1
HECA
TCF3
CAMK2G
NMD3
PAFAH2
ZNF527
NOCT
PAK1
LY86
ZNF236
ZNF444
LARP1B
SSBP4
FDPS
CELF1
PTPMT1
KIF15
KIAA1143
RACGAP1
SPATC1L
TMEM102
FGF11
CHRNB1
VPS37B
TXNDC9
EIF5B
PGAP2
UMAD1
H3C13
H2BC18
WDR74
PPM1D
ZNF200
PRPF40B
MTF2
HBQ1
HBA1
ZBTB20
SPTBN4
ZZEF1
CYB5D2
BLVRB
EXO5
AASDH
PSMG2
CEP76
FRG2
EEF1G
PGAM5
RBAK-RBAKDN
RBAK
TRIM24
INAFM1
AP5Z1
OSBPL11
MPP5
LRR1
LTA4H
GPAM
C10orf143
DUS2
DDX28
ZNF697
GINS4
C1orf198
DPP9
ZNF593
C1orf232
QKI
H2BC21
H2AC21
H2AC20
TTC14
SPHK2
RPL18
ZRANB3
R3HDM1
FADS2
FADS1
ACOX3
TRMT44
METTL8
DCAF17
PHF7
BAP1
NUDT18
EIF3A
PLTP
B3GAT3
CCDC124
ZNF335
POR
CMSS1
ATG5
INPP5A
TRIM26
GTF2A1
TIA1
HES4
PDE4A
CHFR
OXNAD1
DPH3
NDUFA10
OR6B2
H4C3
H1-6
OXSR1
NSUN7
TNFAIP1
IFT20
PRC1
FTCDNL1
SLX4IP
MKKS
FAHD2A
RNPS1
STAG1
RPL24
DDX56
SFI1
MLLT6
CFAP53
RRP1
TRMO
CCNL1
GNB2
AMN1
MYLK4
TBL3
ZW10
NUP153
CLPX
FOXJ3
WFDC3
DNTTIP1
ETFDH
C4orf46
SUPT16H
TSTD2
NCBP1
PRPF4
CDC26
PKIG
GPN3
FAM216A
NDUFB6
INTS12
GSTCD
DUX4
POLG
CCDC28A
TRIP10
GPR108
KMT2D
CD55
RPLP2
PIDD1
LRRC57
HAUS2
KBTBD7
ADCY3
STK19
DXO
ADPGK
IPO4
SRSF4
SERBP1
SPRYD4
STX10
IER2
ZDHHC7
PSPH
CCT6A
NAT10
BRAF
UFSP2
C4orf47
MDP1
CHMP4A
ETV5
SEC23B
HMGCS1
FAM149B1
ECD
SNRPG
AHCYL1
CTDP1
IQCH
AAGAB
ULK4
SOWAHC
SEPTIN10
MVK
STXBP3
PSMA3
IPO11
WASHC2A
PTPN6
C12orf57
TMEM259
CNN2
ATP13A1
METTL2B
SNAPC3
SNX16
ATXN2L
CHAC2
PDE7A
POLR3E
FBXL19
TRUB1
BDH1
WDR89
RPRD1A
CIAO2B
CES2
CMTR1
PRDM4
CLPB
ADNP2
ZNF829
ZNF568
FBXO34
CCAR2
C8orf58
DSTYK
TIMM10B
ARFIP2
PPP1R15A
PLEKHA4
MYNN
CENPE
C20orf96
GIT2
ANKRD13A
ANKRD17
RNF139
STK11IP
CLCN3
YY1AP1
DAP3
C12orf65
TEX14
RAD51C
PHIP
SPATA7
CENPBD1
CBWD1
AMDHD2
WDR19
WARS2
MOB1B
MTHFSD
CSNK1G2
SACM1L
EGR1
CD164
SH3GLB1
UIMC1
TCTE3
ERMARD
MLEC
DOHH
NUMA1
LRTOMT
PLD2
RNF166
CTU2
DCAKD
NMT1
MRPS22
MTRNR2L6
TMSB10
FMC1-LUC7L2
FMC1
ING4
KNL1
NOP58
TIMM17A
ECSIT
PDCL3
ZNF260
TTC4
CITED2
PAIP1
UBE3A
EIF3B
DMAP1
SETD3
CCNK
EIF1AD
BANF1
FANCD2
NDUFS7
TRIM7
ABCF2
HACL1
BTD
INTS6
ANAPC5
CLTC
TSPYL5
RFX1
TSR1
SGSM2
MTURN
PPP5D1
CALM3
WDR46
PFDN6
POMZP3