ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3798674 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◣ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
SNX25
CFAP97
THOP1
SGTA
BAX
CAD
ATRAID
PTDSS2
SPRYD4
AKAP10
CCDC86
ZNF296
GEMIN7
LSM12
G6PC3
MSTO1
NME1-NME2
NME1
TENT4A
DHX33
ZNF485
NME2
DIAPH1
SNRPD1
MTHFD1L
GNPDA1
HMGA1
DRG2
SLC25A10
GARS1
UBE2K
GTF3C4
DDX31
TBL1XR1
SMYD2
EEF2K
PSMG4
GPSM3
KEAP1
YBX2
TMEM248
NOC4L
DDX51
MDN1
SRSF1
TRIAP1
FAF1
GET4
GCN1
IARS1
CLCN7
CARNMT1
PINX1
ADORA2B
NRAS
PEMT
PMS2
AIMP2
METTL1
EEF1AKMT3
CYP27B1
LARP1
SNF8
SAMD10
PRPF6
GATAD2A
PAQR7
B9D1
SLC25A33
IGF2BP3
GOLIM4
ZSWIM7
TTC19
EIF3B
PCBP1
HS3ST3A1
SCAND1
GAR1
UBE2S
AKAP1
PPRC1
FAM83G
LONP1
CATSPERD
LAMP1
C10orf95
EIF5A
MRPL3
RAN
STAMBPL1
CBWD5
PDS5A
PLD6
RAD50
B3GNTL1
TRPM7
NPM1
CCT2
UTP11
PRKAR1B
DR1
CENPV
EBNA1BP2
CFAP57
SLCO4A1
COPS3
GABPB1
AEN
NT5M
NCL
PMP22
MTHFD2
KDM6B
RBM18
MRRF
HNRNPU
DPH5
MRPS17
GPAM
ODC1
CLN6
KCNQ5
NUP50
DUS2
DDX28
NDUFS1
EEF1B2
SLC25A45
FRMD8
PARP1
TBRG4
SPHK1
TRMT6
MCM8
NOLC1
TAF4B
GCFC2
DDX42
CCDC47
CSE1L
GTF3A
GID8
DIDO1
VMP1
PTRH2
TNRC18
LOC100129484
OSGIN1
TAF5
MARVELD1
SLC35E2A
C16orf91
NOP16
HIGD2A
ZNF664-RFLNA
ZNF664
CCDC92
MRPL15
WNT2B
NCBP2AS2
NCBP2
EIF4H
UTP4
DERPC
CHTF8
AASDH
SEC14L1
TSNAX
JADE2
KMT2D
HNRNPF
EPOP
SH2B2
UBP1
BRICD5
PGP
SLC16A1
MAP2K2
POPDC3
SLC5A6
GYG1
FNTA
MLLT1
ARSG
SLC16A6
ACYP2
SLC39A14
PSME4
DCAF7
MED9
PIAS2
KATNAL2
NOC3L
DIMT1
CBWD3
RBM28
CNOT8
PAFAH1B2
CACNB3
URB2
TAF5L
C1QBP
ACBD6
SSNA1
ANAPC2
TBL3
RNF151
AATF
TRPC4AP
MAN1B1
CNBP
UTP18
MBTD1
MTG1
MBD3
TSR1
SGSM2
PPP2R3B
DNAJC11
HES4
PLK3
MAGOHB
SPTY2D1
PARG
SF3A3
FAM98A
TRMT61B
USP32
TTLL4
SRSF10
POM121
UBE2G2
RRP1
CBWD2
TRMU
ZFP36L2
MEF2D
ZNF3
MRPL55
PRPF3
PRR7
DGLUCY
BCAT1
RCC2
CBWD1
TRABD
SOD2
WTAP
CBWD6
RRP1B
HSF2BP
PRPF19
TRMT61A
TET3
SEC31A
TRAP1
MAP2K3
CTU1
CLPTM1L
PIGL
NCOR1
SECISBP2
EEA1
CELSR3
GPR157
COA8
BAG5
EIF4B
HSCB
CHEK2
NAT10
PEBP1
PDCD11
ATP5MD
TSPAN4
POLR2L
USP14
MRTO4
EMC1
YBX1
SYNCRIP
USP36
PPIA
HAGHL
CCDC78
PUS1
TUBGCP6
SLC35E2B
NCR3LG1
POLI
TRIP13
BRD9
ZNF84
PRMT1
WDR74
SNRPE
SFSWAP
TIMM23
ZNF639
BIRC5
COPS6
MRPL21
IGHMBP2
SLC19A2
C8orf33
AGPAT5
ZZZ3
SPTSSA
SLC3A2
RAD9A
TMEM38A
SMIM7
RYBP
CLUAP1
C16orf90
LOC100289561
OSGEP
APEX1
HK2
TRIP6
NRP2
HDAC7
HPS1
RALGDS
CYB561
TUBB4B
SAMD13
ATL3
UBAC1
GPN3
FAM216A
LRRC58
NT5C3A
TATDN1
NDUFB9
UCK2
ZNF706
RPS23
ATP6AP1L
ANP32B
TTC7A
MCFD2
CWC25
MAPKAPK5
ATIC
NOL8
CENPP
TMEM268
WDR43
HSP90AB1
WDR18
ASAP1
RRM2
MRM3
GLOD4
GTF2H3
EIF2B1
PLAC8
SRSF11
XPO5
POLH
ENO1
PTMA
PES1
THNSL1
UCHL3
COMMD6
COX10
SUPT3H
SUMF2
ATXN2
NBPF1
TIPIN
SCD
TOMM34
FLRT2
PFAS
POLD1
MAT2A
RSBN1L
FOXK1
THUMPD3
DUSP12
HLTF
SRRD
HPS4
UBE2Q1
TRIM16
IARS2
BPNT1
PDHB
POGK
DCP1A
PPAT
PAICS
LDHA
INTS1
KAZALD1
AMDHD2
ZBTB44
UBR3
METTL5
TMEM33
GNL2
IRX5
CRNDE
CTPS1
FBXL4
WDR4
MRPL4
HCN3
CLK2
NELFCD
ECPAS
LYSMD2
FAM156A
FAM156B
SMARCC1
RNF2
DDX19A
TRAF3
C14orf93
FAM227B
DTWD1
ZC3H12C
KMT5B
SREK1
PKP4
CCDC148
AHI1
FLCN
GEMIN8
ZNF202
METAP1
GIGYF1
STAG1
ABLIM1
KLF16
ZKSCAN2
RANBP2
TIMM44
SRD5A1
MFSD4B
SNRPC
TBL1X
PHF7
BAP1
QTRT1
DYM
YARS1
S100PBP
NFE2L2
SIAH2
ZNF410
MID1IP1
NT5DC3
TVP23B
ZNFX1
CAPZA2
RBM42
TERF2IP
KARS1
RLF
TFB1M
USO1
WASHC2C
MBNL1
ZBTB25
ZBTB1
ELAVL3
SLC29A1
LUC7L3
PHLDB1
RSL1D1
AKR1A1
OPA1
TMEM116
ERP29
KNOP1
IQCK
UBAP2L
C1orf43
R3HDM2
INHBC
KLC1
FLVCR1
ARRDC2
SNAP47
JMJD4
FBXW8
FAN1
NOB1
SEC61G
TPRA1
NFAT5
GNAT2
AMPD2
SETMAR
POU2F1
PKN2
USP22
GDI2
HDGF
SFXN4
PTP4A2
RIOX2
CMSS1
RAD21
SNX5
MGME1
RPUSD4
FAM118B
EIF4A1
SRM
IER3
FLOT1
HSPA9
PSMB6
ARHGAP11A-SCG5
ARHGAP11A
TAOK2
QSOX2
ZSCAN22
ADCK1
PUM2
CENPE
SMIM12
SPATC1
CFAP20
EPRS1
FUS
UBA6
P4HB
HDAC2
JMY
RNASEH1
MFF
HDHD5
TBC1D22A
POLR1B
INO80
ADGRB1
PCID2
CUL4A
ANKRD40
RASA1
STK19
DXO
RPIA
FANCD2
TMA16
SELENOO
DCTD
MRPL45
MAP4K5
ATL1
NOL10
NEURL4
CLTC
TMEM121
KHDRBS1
GNPNAT1
PER2
UBA52
RANBP3
B3GAT3
COQ2
L3HYPDH
JKAMP
KANSL2
MTF1
RGS10
ZNF460
RNF166
CTU2
LMNA
FABP5
NFIB
SLC35B2
SUGP2
ARMC6
TMEM70
ELOC
AHCY
MCIDAS
ATXN1L
SLC5A3
MRPS6
NR1D1
TAMM41
STBD1
TMPRSS9
PIMREG
IRF2BP2
SERTAD2
DUS3L
ICE2
SHQ1
MICOS13
HSD11B1L
TARBP1
BHLHE40
CTBP2
RWDD2B
SP3
NAA10
ZC2HC1C
ACYP1
LDHB
C8orf37
FARSB
ZNF292
ANP32A
MFAP2
CCDC188
SPG7
CTSC
N6AMT1
NTMT1
YRDC
C1orf122
MET
HPX
SLC9B2
SHLD2
GLUD1
ELAC2
ARHGEF10
THBS4
MTX3
SCAF11
FAM187A
EFTUD2
CCDC103
GPX1
SLC2A4RG
LIME1
CST6
HAUS5
FBL
LDLRAD3
PSMB2
IFRD2
TSEN15
SIK1B
SIK1
SFT2D3
NUP153
ITGB3BP
EFCAB7
KANK1
GPR89A
EXOSC5
BCKDHA
PFN2
MICALL1
PWP1
FAM124A
APP
FAM133B
RPS16
SEC61A1
IGF2BP1
STARD7
C2CD2
NBEAL2
CCDC12
C16orf70
CAMLG
TOMM20
CCDC125
LRP6
TARS1
STEAP1B
MCMBP
PXK
RNPS1
WTIP
P2RX2
LRCOL1
TUBA1B
PMPCA
ENTR1
TBCB
POLR2I
OVOL3
NUDT9
BZW2
ANKMY2
B4GALT2
ATP6V0B
SPIN3
CKAP5
MACIR
WIPF1
INPP5A
RASAL2
EBAG9
PIK3R3
SPRED1
RASSF1
WDR17
COL19A1
ADPGK
C12orf73
SUPV3L1
ATP5F1E
PALM2AKAP2
B4GALT7
RMDN3
WASHC2A
LRRC40
ING5
ZNF263
DNAAF2
POLR1F
TXLNA
FBXO5
SLC6A15
SUGCT
MPLKIP
EIF4E
SOX12
C12orf66
PHF3
COIL
RPS5
EIF3A
NOM1
CHD1L
LRRC59
LSG1
SETD7
DNA2
PURB
JPT2
RPE
GCLM
PAPSS1
UBALD1
ORAI1
CLDN1
RPLP0
EVX2
MARCHF9
CDK4
ANK1
ARF6
ACOX3
TRMT44
GOLGA3
HIP1R
HAX1
PHF19
EEPD1
UCKL1
SHMT1
NQO1
SLC49A4
HSPBAP1
UNG
ALKBH2
BRAF
SLX1B
SLX1A
BOLA2B
BOLA2
HPS5
GTF2H1
TRIM8
ASPSCR1
GTF3C3
LANCL2
SELENOH
ZBTB24
EPB41
WNK1
SLC12A9
XIAP
TIMM17A
PRMT3
SLC9B1
MAP3K7CL
CCT8
FXN
HNRNPL
CUTC
COX15
SSB
COPS7A
LDAH
MTLN
BATF3
MMAA
FBXL22
HNRNPA2B1
CBX3
UTP14A
KTN1
URI1
CRLS1
SDAD1
ERLIN2
MKRN2OS
MKRN2
HSPA8
MLXIP
GLRX5
MXD3
TAF9
RAD17
AK6
TNS2
ANKRD50
EMC8
COX4I1
NOP9
DHRS1
ZNF516
SMC3
CNPY3
COLEC11
ZC3H8
MRPL40
HIRA
LYPLA1
IMPACT
CDCA8
C1orf109
HSPB8
SYT17
UNC79
BTBD7
ZNF333
TM2D3
EIF3M
PFKFB3
RHOQ
ATP6V1E2
ZNF496
CYCS
SDF4
B3GALT6
DDI2
SETD5
RIOK1
CAGE1
XPO6
STK4
STEAP1
GPR176
RPUSD2
CCDC32
PXT1
KCTD20
RBBP8
KHK
MICALL2
ERCC6L2
POLE4
DLX4
KMT2E
PIH1D2
NKAPD1
DDX5
UBE2D3
CISD2
PAXX
CLIC3
NOL7
NME6
CDC42EP1
EIF1AD
BANF1
CCDC88A
IPO13
TERT
SLC35E1
TNPO1
CHN1
PPP1R15B
DRAM1
STYXL1
CTCF
DEGS1
ENG
MRPL42
SAMM50
NFE2L1
BCL2
PITPNC1
CLIP2
NDUFA10
OR6B2
MAPK8
WSB2
PDCD2
COX20
PIM3
UBQLN4
LAMTOR2
LARP4
FAM186A
ADK
DDX46
SLC25A40
DBF4
CCDC124
SLC39A13
DLAT
CAST
TXNDC5
COA7
MRPL24
RPS8
TBC1D24
NTN3
PSMC2
DNAJC2
MRPS15
PSD3
RPS6KB2
PTDSS1
MTERF3
YEATS2
G3BP1
AXL
INSIG1
MVB12A
NSMCE4A
ITPA
DDRGK1
TOP3A
SMCR8
SPCS3
ZMYND19
PEF1
ARAP3
TRA2B
SCFD2
ZNF131
UBE2M
CHMP2A
DNTTIP2
POMZP3
SLC2A1
TFAP4
GFM1
ZDHHC3
EXOSC7
TUBA1C
TNIP1
VPS37B
PPP4R2
PPM1G
RPL18A
ZBTB42
AKT1
PPP1R3E
BCL2L2-PABPN1
BCL2L2
ZNF785
EPC1
NSD1
PRPF4
CDC26
CDKL1
PGRMC2
NUP214
CCNL1
CUL9
YIPF3
POLR1C
FAM149B1
ECD
PUSL1
ACAP3
PDIA5
CNDP2
ZNF239
RNMT
FAM210A
PDP2
PSMB10
CTRL
CTHRC1
DNAJC9
C16orf71
ANKS3
GID4
ATPAF2
URB1
UNKL
SPOUT1
SLC25A37
ZNF121
CCDC116
NLE1
SLC35F5