ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025674 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◣ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

PMF1-BGLAP
PMF1
GPAM
SLC35E2A
MTRNR2L2
MSH3
DHFR
SLC35E2B
SSNA1
ANAPC2
NOC4L
DDX51
MRPL55
CWC25
MED9
RBM42
DRG2
SIRT4
NUP153
LSG1
MTRNR2L8
PSMB2
ADPGK
FAM149B1
ECD
MRM3
GLOD4
AP2B1
NOP9
DHRS1
MAGOHB
LANCL2
TRMT61B
CCDC86
TBL3
TMEM107
AASDH
TRIAP1
SMG8
MRPL2
KLC4
PHF7
BAP1
SRRD
HPS4
DNAJC19
UTP25
PDCD7
FAF1
ERCC6L2
SPTLC1
RPL9
LIAS
RRNAD1
ISG20L2
PSMB6
FAM228B
SF3B6
NME1-NME2
NME1
GTF2H3
EIF2B1
RPS6KB2
ATXN1L
DCAF8
BRAF
RMDN3
BDP1
COA8
BAG5
LMBR1
WDR74
FBXO34
PTPN6
C12orf57
TBRG4
RRM1
JOSD2
ASPDH
PTOV1
DPH5
NCOA5
PEX10
HAUS5
RANBP2
RPLP0
ELP3
RBBP5
ZSWIM7
TTC19
SSU72
NUDT9
ZNF330
STXBP4
COX11
CCDC59
SMAD7
MTF2
PPP2R3B
WASHC5
NSMCE2
RPS7
EPRS1
DHX40
CENPE
COMMD1
CCT4
IPO4
HES1
WFDC3
DNTTIP1
KPNB1
PKN2
RLF
RALGAPA1
TUBGCP6
FANCD2
NDUFA10
EGR1
H4C11
CTDP1
POMZP3
CCAR2
C8orf58
ANKRD40
PMVK
FAM98B
TRIM7
TCF4
NDUFS7
SETD3
CCNK
TMEM259
CNN2
TTI2
ABT1
ZDHHC3
EXOSC7
UNC45B
ZNHIT6
C7orf50
UBB
FAM122A
SRSF11
DNAJB4
LRRC40
H4C12
ZC3HC1
LEO1
NUP214
ZNF547
TRAPPC2B
CDK11B
INTS12
GSTCD
MRPL44
RAVER1
SHF
PEMT
FOXJ3
TIPIN
RPS8
FLCN
H4C15
H4C14
PRMT5
TMEM79
SMG5
VPS37B
ARL6IP1
DENR
SAMD11
NEURL4
NBEAL1
RNF166
CTU2
GGCX
C8orf33
COPS3
DLAT
ID1
TACO1
CRLS1
GBA
SPRTN
EXOC8
PHF12
SRSF10
DNAJA3
N6AMT1
ANKRD26
RAB35
NBEAL2
CCDC12
ADI1
SUGP2
ARMC6
SMARCA4
VDAC3
LUC7L2
XRCC5
MLST8
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
BANP
TUBD1
RPS6KB1
PDRG1
PRRT2
FAM220A
PAGR1
MVP
KHDRBS1
ENTPD6
POLA2
SDHA
CCDC127
PRMT2
CXorf38
APOLD1
RAD21
ACTN4
FAM98A
BNIP3
LONP1
CATSPERD
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
SYNGR4
SAYSD1
XPO5
POLH
CENPBD1
MCRS1
TOLLIP
NPRL3
SAMHD1
ATP6V0E2
NBPF1
FAM200B
ITPA
DDRGK1
PPP6R1
MAP2K2
ZBTB17
GTF3A
RPP38
RANBP3
PTPN4
ABCF3
EHMT1
DAGLB
THAP7
RABIF
INTS13
FGFR1OP2
FAM24B
MAN1B1
MRPL54
APBA3
C1orf74
CHMP7
SPPL2B
LSM7
LAMP1
MTHFSD
CBX5
MYPOP
ZNF12
WIPI2
HNRNPH1
EID2B
HNRNPL
HNRNPA1
FAM71E1
EMC10
FMC1-LUC7L2
FMC1
ABCA3
MRPS18C
HELQ
PRR30
PREB
TMEM250
RAB18
TK2
CKLF-CMTM1
CKLF
MIS18A
NDEL1
NAGK
IFNAR1
SMIM11B
SMIM11A
NANP
XRCC2
SH3YL1
ACP1
HASPIN
ALKBH5
RRP1
SLC2A11
AKAP1
PITPNB
TMEM209
SSMEM1
SUMF2
CRTC1
PATL1
LOC100287896
LIPT2
KDM8
RCBTB2
MAP2K7
PBLD
HNRNPH3
CBY3
TRIM37
FADD
PPP1CB
PPP2CA
CDC7
YEATS4
TMED4
MOK
NOB1
SLX4
SELENOI
ADGRF3
NELFCD
NPM1
SOD2
WDR4
SPDL1
HSD17B8
MRPL45
LOC100289561
CCNT2
TMEM141
CCDC183
PTK2
CACYBP
HINT1
STYXL1
RPL36
ZNF576
IRGQ
CDC5L
SKA3
MRPL57
SAFB
SAFB2
SLC39A7
RXRB
SLC25A11
RNF167
OARD1
NFYA
USP21
CHD1
SEC22C
MTCH2
PUF60
OPA1
RBM17
TXNL1
SRCAP
LOC730183
RPL10A
FUT8
SRSF1
ZZZ3
BRICD5
SMG9
VPS13A
NUP107
SNRNP70
BTBD10
MARCHF7
ZNF583
FAM120B
COPB2
ASNSD1
ASDURF
AMZ2
RPS19
UNG
ALKBH2
C6orf89
MRPL24
TAS1R1
NOL9
NOP14
GRK4
RSRP1
NUP50
THOP1
SGTA
HP1BP3
CCT5
ATPSCKMT
COQ9
CIAPIN1
TRMO
RTL10
GNB1L
RALGAPB
EIF2D
OSCAR
NDUFA3
RPL12
LRSAM1
GRB2
TOMM20
TUBGCP5
SLC15A4
MAD1L1
RAD23A
MSL2
DPF2
GMCL1
LRFN3
NCAPG
ECHS1
POLR2J3
ARF3
QRICH1
UHRF2
PARK7
TOR1AIP2
TOR1AIP1
TBC1D5
MPC2
DCAF6
TDP2
ACOT13
TMEM18
POP7
MLX
COASY
TAOK1
XPC
LSM3
MAP3K7CL
CCT8
C5orf24
NAA35
CCNQ
SPOP
THAP5
DNAJB9
PPP4R3B
SRRM1
WDR73
NMB
ANKFY1
SUPT5H
SARS1
TAX1BP3
EMC6
DHDDS
RPS6
FBXO31
ASXL1
EEF1AKMT1
CCNC
BLOC1S4
ACAT2
INTS7
DTL
TMCO1
CRB1
CAPZA2
RPL17-C18orf32
RPL17
DYNC2I1
THOC3
PRDX1
ZFP91
LPXN
SMIM14
NCOA4
POM121
RFC5
TMEM139
CASP2
SH3GL1
CHAF1A
COP1
SCAMP5
GDF5
CEP250
GPBP1
ERGIC2
ZBTB2
PPME1
C2CD3
AKAP11
MAK16
RPS11
TOPORS
SMIM27
AP3B1
NAPG
RBAK-RBAKDN
RBAK
RPS28
NDUFA7
ZNF286A
GPATCH3
CAND1
TTC32
NOL11
NAA38
PURA
CDK12
GID8
DIDO1
KAZALD1
DNAJC27
FBRS
AURKAIP1
FSIP1
ARFGAP3
SMIM10L1
PRH1-TAS2R14
DYRK1B
TMEM88
CYB5D1
HSPA4
UBR3
METTL5
MAP1LC3B
CFAP70
GAS8
DBNDD1
SLC26A8
MAPK14
DBR1
ATF2
U2AF2
C6orf136
SNX5
MGME1
MRS2
USP10
CDC34
WDR13
SHBG
FXR2
STS
PUDP
FAM135A
XPO7
TTC23
LRRC28
PAPSS1
PDXDC1
RNF149
SMARCC1
UBE2M
CHMP2A
VMAC
NDUFA11
DARS1
IPMK
CISD1
NKTR
TIGD1
SPEGNB
GMPPA
EIF4E2
PSMD5
EHD1
AHCTF1
LTV1
ETFA
NDUFA8
MORN5
IREB2
HSF1
BOP1
EPS15L1
TMEM70
ELOC
C8orf48
CEP350
SRD5A1
UBE2D3
MMS22L
ZMYM4
MATR3
EIF5
USO1
ICMT
NOP16
HIGD2A
MINK1
ZNF664-RFLNA
ZNF664
CCDC92
WDR18
STRIP1
PRELID3B
EIF5A
RAB33B
ESRRA
CATSPERZ
PALB2
DCTN5
TMEM104
NAT9
ARPC2
ZNF638
SIRT5
UROS
BCCIP
MYL5
ATP5ME
FASTKD2
EIF4A3
CC2D1A
C19orf57
SYS1
MTG1
RPL27A
SUGP1
MAU2
HINFP
MAPKAPK5
HERC1
SHPRH
RBM15
ATAD3A
POLDIP3
TFB2M
CNST
SCAF11
MAP3K7
KIFAP3
RSL1D1
EFHC1
TMEM63B
MRPL14
KIAA1191
ARL10
UTP18
MBTD1
CYCS
SRRT
KCNN1
TIGD6
HMGXB3
SEC62
HSBP1
SLC25A4
SEPTIN7
RCC1
TMEM63A
GZF1
CSDE1
MORF4L1
VMP1
PTRH2
TMEM43
CHCHD4
FAM76A
CNP
PRDM4
SCAND1
RPL8
GATD3B
GATD3A
CUL3
ZBTB45
MKNK2
RPL7A
MED22
MAPKAP1
ZCCHC14
NUF2
WRNIP1
RPS15
MBTPS1
NFYC
TIA1
CCDC93
TENT4A
WDR43
DHX37
BRI3BP
DSN1
MED1
DLGAP4
MICOS10-NBL1
MICOS10
CDC20
DFFB
CEP104
NBPF3
NUDCD2
HMMR
ZNF346
KIF5A
DCTN2
POLR2J
C15orf40
EID1
SF1
ALG8
RFX1
ADAT1
PXMP2
POLE
MRNIP
THAP1
MRPS7
GGA3
HBS1L
RNF151
GLCE
CIAO3
IKZF5
ACADSB
GOLGA1
PRKDC
MCM4
PUM2
POLR2J2
CBWD5
SMG7
CD2AP
SPAG16
FIP1L1
KIN
ATP5F1C
TMX1
SRP19
SLC12A2
B9D1
SBNO1
WDR27
C6orf120
PIAS4
ING1
GRWD1
WWOX
RPS29
NR1D1
ARHGAP35
PPM1G
MRPL21
IGHMBP2
CPLANE2
RBPJ
PTBP1
ATF7-NPFF
ATF7
APTX
ENDOV
TSEN2
ZNF317
PHF23
USP54
MRTFB
RBM26
RC3H2
HSPH1
THADA
LINS1
ASB7
YIPF3
POLR1C
MBD1
PFKFB4
PCGF1
LBX2
UIMC1
CBARP
ATP5F1D
CHUK
DNTTIP2
CCDC77
CLPTM1L
ZBTB14
TGOLN2
TRAPPC2
OFD1
RPRD2
RNPC3
C8orf37
MICU2
CBWD3
ZFC3H1
THAP2
CD320
UPF1
NSUN3
DHFR2
WDR77
ATP5PB
GOLGA8B
CFAP410
NRBF2
TSACC
CCT3
CAPN7
NAPB
CCNT1
TMEM127
CIAO1
WWP1
DNMT1
SIPA1L1
EXOSC10
POFUT2
RNF32
PCBP1
AMACR
ZNF248
KIF22
NAT10
MTHFD1
MFSD8
ANKRD13C
ABHD18
ASH2L
ZKSCAN2
SMARCA5
POLR2E
TSSC4
UBALD1
ARF4
RAD23B
ZNF34
C11orf80
ANO10
ABHD5
SF3A3
WDR6
YOD1
PFKFB2
GDI2
IMP3
DCP1A
TIGD5
SPEN
EEF1D
ACTRT3
LIN7C
TADA3
ARPC4-TTLL3
ARPC4
SPRYD4
NFXL1
RBM18
MRRF
PGRMC2
EIF2S2
EIF1AD
BANF1
SNRPC
GPAA1
EXOSC4
PRPF39
IQCC
CCDC28B
TMEM183A
ZNF692
FZR1
PAXBP1
NPTN
STX1A
ZNF296
GEMIN7
ETF1
ZC3H14
INO80C
CNOT4
HEXIM1
POLRMT
ATP5MC2
DHX9
KDM3A
CBWD6
CCSER2
ATP5PO
TAB3
IPO11
DCDC2B
AGA
ACAD9
VPS13C
GABARAP
C1orf53
IFRD1
ERICH6
EIF2S1
ATP6V1D
ZNF182
SPACA5B
SPACA5
DUS2
DDX28
SMARCD2
PPA1
SREBF1
CENPS-CORT
CENPS
RELCH
PIGN
INKA2
DDX20
UQCR11
NRF1
ZNF329
ZNF414
METTL16
TMED3
TMEM109
ZNF420
AGBL3
CSNK1A1
SPG7
LSM12
G6PC3
DVL2
ZNF652
E2F6
SLC30A5
TMX3
CCDC102B
YIPF2
TIMM29
KBTBD6
SAXO1
RRAGA
PSENEN
LIN37
CLIP4
THAP12
GVQW3
ELP6
MRPS18B
PAPOLA
DDHD2
MOCS2
SLC35B4
SMC4
IFT80
DDX19A
SPECC1L
SEH1L
PGP
RAPGEF6
DLD
ZNF136
TBCCD1
DNAJB11
NUP62
IL4I1
ATF5
ERLIN2
DSE
DHX34
STX16
TAOK2
PDCL3
RPL26
KDM6B
SPAST
PLEKHA8
KCNAB3
CNTROB
PCIF1
TMEM120B
MYO9B
HAUS8
MSRA
FUBP1
KCTD13
ASPH
CCNJ
DMAP1
SNX25
CFAP97
PPIL3
NIF3L1
ZNF473
VRK3
ZSCAN22
FITM2
FAM227A
CBY1