ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111320 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◣ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
SLC6A2
NRL
DCAF11
TNFAIP2
GPR84
GALNT16
FOXJ2
ZNF48
TBC1D10B
MYLPF
HOXC6
HOXC5
TCIRG1
NDUFS8
SCML4
MAP3K7CL
CCT8
PPP5C
DUX4
DNAL4
RPS5
TIAM2
IGLON5
ING3
KIAA0319
DRGX
TRAF3IP2
NRSN1
ENPP7
DPP6
SF3B6
FAM228B
TLE5
GNL2
FGF8
CXCL12
PIH1D1
ALDH16A1
HOXC4
OLFML2B
GLDN
UBXN10
PLA2G2C
NR3C1
RPL24
GFRA3
GPR68
SEMA5B
TOMM40L
APOA2
KATNB1
TMEM183B
PFN2
DIABLO
FBXW2
P2RX1
C6
CCN5
TGFBI
SLC17A8
MTRNR2L2
MSH3
DHFR
ABCA12
CBX5
PRR13
USH2A
WIZ
ZSCAN31
KCNAB2
FAM163B
RMDN3
GCHFR
TLE3
NPR1
ILF2
C10orf105
TBX15
FKBP1A
SYBU
LPIN1
GSX2
ITGB5
C1orf100
BFSP2
RIMBP2
RAPGEF2
TIGD4
ARFIP1
SLC7A14
CNTNAP4
SIPA1L2
CHD1
SLITRK5
SMYD3
ACTR3C
STRN3
AP4S1
ZNF654
CGGBP1
LRRTM4
KBTBD11
TBX3
IGFBP5
LRRC15
CYTH3
ETV1
EVI5L
CMTM4
NCK1
FAN1
VAV3
KL
C9orf62
DDX43
ATG9B
ABCB8
LIMS1
SLC17A3
LENG9
CDC42EP5
USP7
GPR83
ZBTB18
KCNK16
TAS2R20
CCDC73
FAM161A
NPTXR
TSHZ2
PNMA1
C1orf185
CPO
MTRNR2L8
HOXC8
ZBTB45
SLC27A5
AQP6
CCDC33
SCOC
SLC12A3
CHCHD3
GGT1
GRWD1
SLC31A1
FKBP15
ZBTB39
TCF4
MAP1LC3C
PRKAG2
SLC2A8
RXFP4
KHDC4
MFSD6
ANGPTL7
C9orf92
RDX
EPRS1
RNF183
ADCYAP1R1
MRPS14
SLC25A25
SAMD11
TUBB1
ATP5F1E
ADGRD1
ROBO4
BEAN1
TPM1
ZNF488
PLEKHS1
RPS7
HAPLN1
MGAT4C
NRP2
GDF11
C14orf180
KDM4B
CDH10
PWWP2A
TBX2
CHI3L1
MICAL3
STON2
ELMOD2
POMC
OPRM1
FOXN4
OXCT1
UGT1A6
GABRA1
IFT57
MECOM
PARVA
PIAS4
CITED2
C3orf52
FRG2C
PDZRN3
ZZZ3
RGS5
SLC25A26
ASCC2
AGR2
PLA2R1
DNAJB8
CHGA
ATF3
MAD1L1
KIF26B
ZNF761
SULT1C4
SUGP2
ARMC6
MACROD2
TMEM60
PHTF2
RET
VSTM2A
NTNG1
PPP3CA
KCNH6
MPHOSPH8
INTS4
ASB8
ELAVL4
RSAD2
SMC2
IQSEC1
CNTN1
SOX4
CHD9
LOXL1
VSTM5
PHF14
PRKD3
HERC3
EEF1AKNMT
CYB561
NFASC
QSER1
COX16
TAOK3
GPR1
PHKB
ITFG1
MRPL28
RNF145
SKP2
LMBRD2
CYRIB
CDH18
HTR4
KRT80
CRYBG1
TNFRSF19
CATSPER3
ID4
PLAC1
TBCC
BICRAL
RHBDD1
UBE2D1
TFPT
PRPF31
TUB
TUBG1
RETREG3
SNX4
GJA5
CDON
H3C15
H3C14
H2AC19
H2AC18
TIMM44
MAP1LC3B
FBXO31
ITPK1
MFSD12
GNAQ
AMY2A
TRIL
TULP3
RHNO1
FOXM1
RCAN1
CEP152
PSMC1
CALM2
EXOSC2
CD200R1L
ZNF552
SEMA4B
ABAT
GGT2
CTDSP1
RP1L1
NEMP1
NAB2
CENPF
CASQ1
PIGM
DERL1
CCNG1
PKLR
FDPS
FBXW7
TEDC2
TBC1D24
NTN3
PLEKHA5
PTAR1
HES6
ZNF555
CTBP2
PRR25
GNG13
MAD2L2
DRAXIN
LIMA1
SIX1
SH3GLB2
MEX3B
BAHCC1
BMERB1
H3-3B
GALK1
RBM25
ARPC1B
TMEM79
SMG5
RNF4
ZFPM2
PHOX2B
CGAS
LRRTM3
TMOD1
PCOLCE2
SUPT7L
SLC4A1AP
FAIM
NRG1
CHST6
SIRT4
SRP14
KCNH2
ACTN1
ISL1
PACS2
BRF1
ARL14EPL
ZBTB7C
HOXA7
HOXA6
HOXA5
HOXA3
YWHAB
FABP12
ATP5MC3
KMT2A
PPM1A
SNX7
SGIP1
ASF1B
LINGO1
PRSS56
RBKS
BABAM2
PHLDB1
AMPD2
SLC48A1
RAPGEF3
RUFY3
PIK3R4
KCNJ3
ZNF667
COMTD1
CHRM3
SLC18A1
NCS1
FBXO30
USP40
CLASP2
SARS1
RAB39A
TOM1
PBX3
RHO
DRD2
STK32B
TMEM262
ZNF510
KCNK15
TOX
OLFM3
GOLGB1
PODN
FILIP1
DGKB
SMARCAD1
ITSN1
CRYZL1
CACNA2D4
MAPK13
PKDCC
STAT1
RTP5
PDCD1
MTIF3
FRMD3
ALG10B
GYS2
MN1
EAPP
RBM12
CPNE1
KNL1
NT5C2
NSD2
ANKH
MTA1
RAB28
ASNSD1
ASDURF
C8orf48
FOCAD
PLD1
BARD1
ZNF775
UHMK1
PDCL
COX7A2L
TNS3
PRKG1
PAFAH1B2
TBC1D4
MTRNR2L1
DAOA
RARB
MOV10L1
MLC1
DPP9
MAP3K3
B3GLCT
RNF24
TIGD6
HMGXB3
TFB2M
CNST
TRMT5
SLC38A6
CTRL
WASHC1
STARD13
KREMEN1
PRKAR2B
CCDC196
ADGRE5
SCIN
ANKHD1-EIF4EBP3
ANKHD1
SUCNR1
RABGAP1L
ELOA2
SCHIP1
SELENBP1
TRAF3IP3
NGDN
PXYLP1
ARL15
SPINK5
INAFM2
TMEM245
ARID5A
KIF2A
DIPK1A
SORL1
SFPQ
ESRRB
CYP51A1
SLC31A2
LYN
DIXDC1
BCL9L
CDIPT
GJD2
RIC8B
DHRS2
BCAR3
WNT5A
ZNF444
ZBTB38
SMARCD2
SLC8A1
HAND1
HOXD8
LRRC18
TNS1
DYNLL1
RARA
EFCAB6
C3orf38
GCSAM
CIB4
COG3
PMVK
ITM2C
CP
NUF2
CPA3
KLHDC8A
TPCN1
LSM5
AVL9
TMEM236
UBL4B
ERCC6L2
MTA3
KCNG3
IL19
TMEM126B
DLG2
VPS26B
NCAPD3
USP25
MORC3
SMAD9
DLX6
TPGS1
MDM4
ASXL2
ISLR2
PCDH15
ULBP3
FOXJ3
PAXBP1
SGSM1
GRK3
CWF19L2
OAZ2
SLC41A2
TRUB2
COQ4
HEBP2
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
PRRT4
APMAP
NOMO3
NOMO1
DPH2
B4GALT2
ATP6V0B
STK40
MAP2
TBC1D31
AMOT
INPP4B
SIRT1
FAM219A
DNAI1
TMEM141
ARL17B
ARL17A
SLC17A2
ACVR1
MAP3K13
CFAP20
TCERG1
ADAMTS17
CUBN
NFYC
WDR74
STX5
STUM
VPS52
RPS18
B3GALT4
AFF3
AMMECR1L
LRCH1
TFAP2A
PAQR5
RAB11B
RARRES1
ICA1
TTC12
TDRD9
ATP5MPL
AP3M2
AGFG1
ZFHX2
AP3S1
SURF4
BCAS2
SLC22A8
GGCT
IRF2BPL
PGM2
HEXIM2
ADAMTS19
ZFR
IGDCC3
FAM222A
BAZ1A
BEND4
RASD2
PRRC2B
TIAM1
TAS2R1
LOC283710
UBC
THUMPD1
PLXNA1
KIF26A
UTS2R
TEX19
EFCAB2
GSKIP
AGTR1
NOMO2
ABCC6
HOXD4
PCARE
CELF4
KHSRP
PSMB2
LOC102724770
DGCR6
ZNF132
DBH
TRPM3
KIAA1549
RPP25
CEP85L
SH3BP2
RPL6
PTPN11
KRT19
CDK17
PABPN1
WDR89
DACT2
KIF18B
CAMK4
NECAP1
CLDN4
FREM1
DHX16
PLEKHG5
IFI27L2
DISP1
FUT6
SFR1
NUDT17
TMBIM6
COL5A2
CSDE1
FZD6
NEPRO
GPR85
AOPEP
FOXP1
EMP3
HSPB1
CUX2
PWWP3A
GBA
FKBP9
DACH1
RSPRY1
PSME3IP1
FAM102B
GNA12
PRLHR
SYNPO
AHCYL1
NUMB
PGP
E4F1
PPFIBP1
CCDC9B
SPART
BAMBI
DCP1B
SRPK2
PLCXD3
SLC4A2
MRPS15
CLDN11
CDK5
ASIC3
SYNE3
FGGY
MTX2
CUL2
NTN4
RACGAP1
MFAP3L
HECW2
ASB6
SMIM3
CNOT3
RGMB
ZNF416
ZIK1
PPP6R1
KIF3B
GPR137B
TAPT1
NME7
BLZF1
CCDC89
BLOC1S6
MRPS33
LIF
TYW1B
RGS4
CARS1
RMDN2
ZNF106
SNAP23
MAMDC2
SLC36A4
SSRP1
P2RX3
SLC44A3
TBL1X
ABL1
TRMT1
NACC1
MTUS1
PIK3C2G
RPH3A
PTGES2
ZC3H3
FCF1
CREBL2
AREL1
ZNHIT3
ANTXR2
C12orf43
LUC7L2
FMC1-LUC7L2
FMC1
CMTM2
DCLK3
FAM107B
SORT1
BMPR1B
ANO6
KAT6B
ZMYND8
ZBTB20
SLC26A7
EEF2K
TOMM40
DAB2IP
HAGH
FAHD1
GOLGA6D
GOLIM4
RALGDS
PRPF4
CDC26
IGFBP3
ZBTB40
TMCO5A
ZNF705A
TM2D3
ZSWIM8
SLC16A14
CREB3L2
CHCHD1
SPATA24
RAB31
ZSWIM4
NOM1
ICE1
RFT1
HDAC9
ZBTB2
HPS6
ARMH3
ZFAND6
MPP4
WNK1
RAB14
GSN
METTL7A
TENT5A
SLAMF8
IGF2BP3
ZNF608
CLMN
CAND1
PDLIM4
B3GNT3
FGF14
STRA6
RPUSD3
SECISBP2
CKS2
C5orf49
SH2D3C
NEK2
SKA2
PRR11
RPRD2
EYS
HNRNPL
RALGAPA1
CFAP126
TM2D1
PATJ
MIR1-1HG
GPR155
POGZ
HPS3
COPS7A
VLDLR
RAX2
MRPL54
APBA3
PMPCB
VEPH1
FAM214A
RASGRP1
MTMR10
KRT13
CPA1
TUBB2B
HEY1
HAND2
GNRH1
TANGO2
ARVCF
TMEM167B
SMUG1
RBM15
FAR2
PDE4D
TOM1L1
H2BU1
H2AW
TNNT2
MRPL44
FLYWCH2
BAX
RXFP2
NEDD4L
NRXN2
MTMR2
MYL10
MAP2K4
MAFA
INTS5
GANAB
RNF14
PCDH12
HSD11B1
RPTOR
NME8
MEIG1
DCLRE1C
GP5
THRAP3
BIVM-ERCC5
FUT8
NR0B2
GPATCH3
ZNF629
TSPAN3
PLXDC2
GNB1
FBXO38
ASPG
ADAMTS9
SLC35B4
GRIK2
CYTH1
ZCCHC8
DDX49
COPE
ZNF394
ZNF302
ZKSCAN5
TYW1
SBDS
ATXN7L3B
ADAMTS5
ATP2B4
KRBA1
CFAP69
MYT1
CRTAP
TSNAXIP1
RANBP10
BCHE
OPA1
LETM1
CERKL
ZNF317
TMEM106B
PLAAT1
PTPDC1
HES1
RPL27
IFI35
CYP19A1
P2RY6
G3BP1
RUVBL2
GYS1
PSENEN
PROSER3
LIN37
HSPB6
PSMD6
EHD4
WAC
NEURL1
MATR3
TMEM101
FIS1
CLDN15
TMEM258
FEN1
DDX39A
UPP1
CYP8B1
APH1B
PRKAB2
CHD1L
CHST12
PTPRE
TGFB2
TCTN3
H4C3
H1-6
ARID1A
PSMD3
ALK
KIF3C
MARCKS
LMO7
MIA3
PCSK6
ABLIM2
ZNF169
SART3
ISCU
CIZ1
PC
FAM98A
TMEM178A
BAZ2A
ATP5F1B
SPTAN1
SEMA3C
ZNF789
ATP5MF-PTCD1
ATP5MF
ROBO1
ZNF350
RNF34
STYX
GPR19
SH3BGRL2
EML4
VIPAS39
AHSA1
H2BC11
H2AC11
SPAST
RAB21
OPN1SW
CCDC136
SLX4IP
MKKS
USF1
TSTD1
PPP2R5E
COL21A1
MBOAT4
DCTN6
ARID5B
TRIOBP
ST6GAL1
ZCCHC14
RTTN
RPF1
PPP2R5B
PEX3
GPR34