ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
NSUN2
MAPKAPK5
DYNC1LI2
NVL
CACTIN
ICE1
NUP85
PSMD12
MRPS7
GGA3
POLR3F
DZANK1
VDAC2
GOSR2
NCLN
REXO1
OAZ3
C19orf48
HSPA9
BLCAP
NME6
IPO13
POLR2E
SUCLG1
SUDS3
UBE2I
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
ZNF576
IRGQ
EFTUD2
CCDC103
RWDD1
MRPS5
ACTR10
RBBP5
COX7A2L
VTI1B
PSMD1
DCTN1
CDC73
PES1
SEC61B
COMMD1
CCT4
SART3
ISCU
RABGGTB
HADHB
HADHA
UPF2
LYRM4
FARS2
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
MRPL11
PI4KB
SUPV3L1
NUP205
STAM2
SKP1
PNO1
USP1
RPL21
ZRANB2
FLOT1
PAK1IP1
C6orf52
ATP5MG
DVL2
SELENOF
HS2ST1
GOLGA5
B3GALT4
VARS1
GADD45GIP1
KRBA2
TAF9
RAD17
AK6
ANAPC7
PTGES2
SNAPC5
EIF2S3
RPS27A
CLHC1
PDHX
APIP
DDX39B
AXDND1
MTRNR2L8
EIF4ENIF1
MRTO4
EMC1
SMC2
PIN4
ZC3H10
TTC8
RPL35A
IQCG
TMED1
TM9SF1
C6orf226
RPS23
ATP6AP1L
VPS28
H4C14
PCBP1
ATP5F1E
ADK
AP3M1
H4C15
DPH6
SF3B3
COG4
SCRIB
H2BC4
H2AC6
NDUFA10
RXYLT1
SUMF2
AMDHD2
BICRA
SYCE2
RBKS
BABAM2
NRAS
MRPL38
H4C12
H4C11
RPS12
GLRX2
DENR
UFM1
WDR74
XPNPEP3
ST13
DGKZ
C18orf32
PYGO2
LOC101928120
FAM104A
C17orf80
BAG6
APOM
ARFGAP2
CD68
CDK12
EDC4
RNF225
PAF1
MED29
MRPL24
GORAB
RPN1
PROSER1
NHLRC3
SYNRG
RBM39
PCBD2
ANKLE2
ALKBH5
H3C15
H3C14
HSPA1B
H4C3
MTRNR2L2
GTF3C4
DDX31
H1-2
CHMP2A
DNAJC9
GET4
H2BC21
H2AC21
H2AC20
C17orf49
H1-4
H2BC5
EXOSC6
PRKAG1
ABTB1
RGL2
DDAH2
SIRT7
LAMP1
INPP5E
RPS29
LRR1
SRSF11
LRRC40
ZNF34
ZNF276
VPS9D1
TBCK
AIMP1
PHF1
CUL7
CMTR1
RPL7
RDH10
NDST2
CISD3
POLG2
STK36
RNF25
FAM131A
MEPCE
ZCWPW1
EPN1
PRRT2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CNPY2
BNIP3
RIT1
LMAN2
VARS2
RHOT2
PRKRIP1
FAM83E
RPS10-NUDT3
RPS10
C19orf53
SURF6
NAPRT
TRAP1
MYG1
ZBTB45
ZNF580
BTBD10
TTC33
RAD23A
GPAA1
ZNF383
ATAT1
MSH4
TIMM13
RRP36
CCDC34
POLDIP3
SMG5
SEC11C
DNAJB14
WDR90
RICTOR
AGAP11
GCN1
HMCES
SLC39A13
HOXA5
MOV10
ARHGAP11A-SCG5
ARHGAP11A
MMP24OS
MMP24-AS1-EDEM2
OSGEP
APEX1
C19orf71
H2AC19
H2AC18
DHRS11
TMPPE
GLB1
CD320
RCOR3
CLUAP1
SECISBP2
POLR2J3
ARF3
SPCS1
GLT8D1
ECI1
POLD1
SF3A3
FUT11
ROGDI
DPH7
LRRC37A3
VWA7
H4C8
MRPL34
SLC35E3
ATXN2
CENPBD1
LLGL2
H4-16
STYXL1
MDH2
GABARAP
MRPL53
SLC25A10
H3C13
H2BC18
HDAC10
JMJD8
GGA2
C8orf82
NAT10
JMJD7-PLA2G4B
JMJD7
CELF1
SLC25A11
RNF167
TRIP4
STRIP1
POMZP3
COMT
ZMIZ2
PSMD5
SCAMP3
EIF4A1
DHPS
WDR6
FAM174C
CCAR2
DALRD3
H1-5
H2AC16
CYBA
SLC26A11
TBC1D13
GPS2
MAZ
BAZ2A
NDUFS3
KBTBD4
SRRT
NDUFS7
NUF2
MAP2K2
PUF60
ARHGEF1
COMMD2
PNMA1
H3C2
RPL37
H2BC11
H2AC11
MRPL40
HIRA
GTF2IRD2B
GTF2IRD2
ADPRHL1
HSD17B8
CRELD1
H4C1
H3C1
NOP14
GRK4
DRAP1
C11orf68
LIFR
SIX5
NECAB3
SELENOH
TSPAN10
NPLOC4
CDK11B
CDK11A
ABCB6
XRN1
PDCD6
BSCL2
DPY19L4
LRP6
CS
TCHP
C5orf24
TATDN3
NSL1
NPAS4
MAD1L1
RCE1
WDR70
H4C2
MAPK8IP3
TMEM43
CHCHD4
SCAP
PAIP1
POLR2J
ARHGAP12
GRAMD2A
ZNF446
PIGO
AURKAIP1
ISG20
ZNF653
GPN2
ERGIC2
LBR
ZNF341
RNF166
CTU2
FLOT2
H4C9
SDE2
C12orf57
C7orf26
ZNF770
TAOK2
PMF1-BGLAP
PMF1
TRIP13
BRD9
SDHA
CCDC127
AKAP8
NXF1
DNAJB12
ABCF1
CCDC138
TMEM267
FBXW9
VPS50
HEPACAM2
KIF2C
NFAT5
NME3
NCBP3
THOC5
DIDO1
SMN2
SMN1
SCAMP5
SHTN1
SSBP1
ERCC6L2
CSNK1G1
H2BC12
H2AC12
CUL9
MATR3
ECHS1
GOLM2
WDR47
TMEM39B
H4C5
CHD8
BCAP29
POLR2C
PCBP2
EHMT1
PACS1
CRTC2
GBA
RAB5B
C16orf46
COX20
ZDHHC23
RUVBL1
EEFSEC
ASXL1
MTF2
MARCHF6
CCDC43
TOM1
PURA
ANKFY1
ORAI3
NEURL2
CTSA
ARMH3
NELFA
GSTA4
CTNNB1
DSTYK
TOMM20
SMDT1
GRB2
LPCAT1
CCDC86
MYO18A
THEM4
IREB2
TRMT2A
RANBP1
ZNF511
TUBGCP2
EIF2D
DECR2
TXN2
SPATC1L
GAA
C6orf47
MTIF2
RAB3IL1
OTUD7B
MEMO1
B4GALT7
ROPN1L
SKA3
MRPL57
TLCD1
PTCD1
CPSF4
LRRC59
CDC5L
MDM4
DCXR
TAF2
SLC15A4
RMI1
HNRNPK
TCF3
AHRR
OSMR
NOLC1
DRG2
ANTKMT
NOP2
EXOC3
PDCL3
PRICKLE4
FRS3
ILF2
ATXN7L2
MAPKBP1
TUBGCP6
RAD9A
EIF3F
MRPS23
ULK3
CPSF1
CYRIB
NAA80
HYAL3
PCBP4
CHD1L
NDUFB2
PRKAB2
NT5C
TRAF4
TAS1R1
NOL9
GPX1
TRIM37
RPP40
WDR31
ZNF286A
BRIX1
BHLHE40
NSFL1C
KLHL12
TGOLN2
ICMT
CLCN7
SLC29A1
THOC6
HCFC1R1
JOSD2
MCOLN1
GSTO2
TSFM
CASP2
RNPS1
VEZF1
SNAP47
JMJD4
CALM1
MADD
AGL
AFF4
ZNF76
SLC50A1
BAX
CLPTM1L
CYB561
GNE
ZNF583
TOMM6
GATD3B
GATD3A
USP21
CSRNP2
DCP1A
CD63
HASPIN
IRF9
SSX2IP
ANKRD13C
LTBR
ENDOV
NOTCH2
EIF4H
HMGB1
USPL1
TDP2
ACOT13
SFXN4
SYT7
GABPB2
RSAD1
RIPK1
WDR11
MED1
PLEKHG2
MAN2C1
CCDC130
CEP350
AKAP1
H3C8
SLC45A4
PABPN1
UPF3A
CEMP1
ABCF3
RBL1
FKBP5
SIRT4
SNTB2
NOC3L
AGO3
SUGCT
MPLKIP
TMEM179B
RABIF
B3GAT3
AMZ2
ATAD2
FAM162A
CCDC58
TMEM170A
WASHC2A
GADD45A
HNRNPA1L2
CXorf38
PRDX1
CIAO3
NR4A1
FIS1
ATP6V1H
ENOSF1
DNAJC25-GNG10
DNAJC25
NAA60
MBTPS2
MLXIP
FAM156B
FAM156A
SLC52A2
FBXL6
H2BC8
H2AC8
BRWD1
LARP1
YAP1
TIPIN
CHAF1A
KAT6A
INPP5K
GEMIN7
CAPNS1
CBWD5
CBWD3
CBWD6
MTERF4
NOC4L
DDX51
DAGLA
ERBB3
SH3BGRL3
RASA4B
HAX1
YARS1
S100PBP
RRP1
MET
PGAM5
MRPS18C
HELQ
KMT2A
TONSL
AMACR
ZNHIT2
PBLD
HNRNPH3
GPRC5A
CLK3
FOXJ3
SCAND1
HIBADH
MVB12A
CCDC24
SRA1
MRPL28
TAB3
WDR62
THAP8
PPP6C
SGPP1
NUDT4B
NUDT4
VPS4A
RRP8
ILK
POLG
QRICH1
DDX56
ATXN1L
TMEM68
TGS1
STX18
TMEM222
GANAB
RPP21
GTF2H2C
GTF2H2C_2
YOD1
TCTEX1D2
PPFIA4
ZNF581
RBM4
PUS7
DPY19L3
NADK
NUP133
NTMT1
TMEM101
SMPD1
PIP4K2B
DCAF10
MRPL58
CLCC1
ABCA3
FOXRED2
POP5
JUND
SUPT16H
HELLS
MTA2
H3C7
MLX
NELFB
RRAS2
JPT2
KIF21A
SNAP29
PI4KA
MRPL12
TSKU
TTC17
JRK
PPP6R1
ZBTB7A
NEK2
PMM1
C10orf143
TAF10
PDF
CNOT6
MED23
BANP
TBL3
MROH6
SEC31A
FDX2
IPO9
CBX2
ADAT1
NANOS1
DENND4B
DNLZ
COX5A
ZNF131
UHRF2
TMEM132A
MTARC1
ZFX
GGA1
BPTF
ZYG11A
LRRC8D
ARFGAP3
ZFP36L1
H3-2
TAF13
SLC24A1
COG2
UBE2J2
VCP
PSMG4
SPIRE2
AKIRIN1
ZBED3
ADGRL1
NAPA
IDI1
WDR37
TBL1X
HDHD2
CYBC1
KCNK1
TJP1
LUC7L2
FAM207A
SRSF4
GTF2A2
TM7SF3
BICD1
MRM1
PARVA
ZBED5
SNX29
L3HYPDH
JKAMP
C16orf70
ADAMTS10
MKRN2
RFX1
ZFAT
NFYC
PGAP6
CDK5RAP1
ARHGEF5
OTULIN
TJP3
TRA2B
MRPL45
MRPL3
TOR1AIP1
CELSR3
GALE
HNRNPUL1
ZNF346
ZNF865
GXYLT1
MDP1
NADSYN1
DYRK3
ADAMTSL4
DNTTIP2
DUS3L
PDE4DIP
TOB2
PTPN4
BUD13
RGP1
GBA2
ZFP1
B9D1
ATR
MAPK7
MIS18A
CCNT1
SSH1
ZNF317
ADARB1
FAM228B
SF3B6
IMPA1
PSMA1
KPNB1
ARL6IP1
FADS2
MED16
FAM118A
GOLGA1
ATAD3A
ZNF623
CSKMT
C11orf98
AXL
TBCB
POLR2I
NTAQ1
EFHC1
CIRBP
WDR24
LMNB1
TULP3
NAA35
SLC39A3
TUBGCP3
ZCCHC14
ATF7-NPFF
ATF7
TEFM
TRIM65
COX19
BOLA3
DIAPH1
ZFYVE9
ZZZ3
MTG1
TSR3
GNPTG
MIEN1
ERLIN2
ZNF497
USP36
ST6GALNAC2
PPM1H
ZNF720
TTI2
SRP19
PNPLA6
KHSRP
DONSON
SRCAP
LOC730183
NUTF2
CENPT
SLC44A1
CZIB
CNP
RC3H2
SIPA1
ZNF594
TEDC2
MAK16
DHX8
NUP155
GTF2H3
EIF2B1
ACAD9
KIF27
FBXO4
MARCHF7
KAT8
RCCD1
DUS1L
SPSB2
SMIM10L1
PRH1-TAS2R14
PRH1
PKN2
NSMCE4A
CANX
ACSF3
ZFP64
CDC16
FAM53B
ZSCAN12
SNX24
PLD6
GMPPB
POLE4
DIP2B
HSD3B7
NDUFS6
AGBL2
SNRPE
EXOSC10
SLC25A45
PPP2R1A
TBK1
RABGAP1
IBA57
BAG2
SLC25A42
TNKS1BP1
H2BC17
H2AC17
MRTFB
PPP5D1
CALM3
AKAP10
EHBP1L1
TRMT61B
TIMELESS
SNRPC
ACADM
ANKRD40
ERLIN1
CPLANE1
APTX
KLC2
MRI1
IPO4
NIPBL
MICALL1
ZFAND1
VKORC1
PMS2
AIMP2
CCDC134
ZNF546
VCPKMT
IMPDH2
SELENOO
MCUR1
PSEN2
SLC35C2
DR1