ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018228 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◣ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

H3C15
H3C14
COX20
VPS28
VEZF1
DNAJB14
B3GALT4
ZC3H10
RRP36
IDI1
SYNRG
FAM174C
NECAB3
POLR2J3
H4C14
SCRIB
ZNF276
VPS9D1
EDC4
ZNF34
KMT2A
POLG2
ZNF580
DONSON
SEC31A
TLCD1
DVL2
INPP5E
JMJD8
EPN1
SNAP47
H3-3A
MAZ
DPH7
CHMP2A
C17orf49
CUL7
H4C15
MUC1
TARS3
SNAPC5
ENAH
PCDH9
OTUD7B
PRRT2
PIP4K2B
TMEM132A
HYI
NUMBL
ZNF862
MMP24OS
MMP24-AS1-EDEM2
NANOS1
NUDT4B
NUDT4
NRAS
GPAA1
DNAJC9
ZNF513
ADNP
RIT1
AKAP8
GGA2
ANKRD54
H1-4
H2BC5
ADARB1
ULK3
DYRK1B
TMEM230
AMDHD2
ABTB1
ZNF653
CABYR
HNRNPU
BCAP29
ORAI3
SUMF2
C18orf32
MEMO1
GCN1
NAXE
PCNX2
MTHFS
RAB4A
MTRF1L
H2BC21
H2AC21
H2AC20
MAN2C1
HIPK1
CTNNAL1
CHAF1B
SECISBP2
DLG4
ACADVL
FNBP1
TAF10
RRM2
RCOR3
SDCCAG8
CEP170
PYGO2
LOC101928120
ZNF865
CXorf38
ST3GAL3
CD68
SH3BGRL3
PRR7
FOXP1
MAML1
BMI1
SLC25A10
CCDC138
STIMATE-MUSTN1
STIMATE
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H3C13
H2BC18
TOM1
FAM199X
AKAP5
POGZ
WDR48
SCN11A
DENND4B
MORF4L1
CASP6
AKT3
LMBR1
FBXL3
ATP5F1E
PPP3CB
ECI1
PRRC2A
SCO2
DHRS11
MORC3
SYCE2
MRPL40
HIRA
VANGL2
SMIM19
SLC20A2
KIF27
RUFY2
NCOA7
LAMTOR3
SEC61A2
H2AC19
H2AC18
PABPN1
SRSF11
PPFIA4
ZFAND6
GPR180
KLF12
KRBA2
ZNF398
GPS2
C7orf26
GTF2IRD2B
GTF2IRD2
PCBP4
AGK
EXOSC6
MAPK8IP3
C6orf226
DPY19L4
ADCK2
RABGGTA
SIMC1
NCAM2
CACFD1
FAM76A
SPATA1
GNG5
IL10RB
SLC25A42
LATS1
C17orf75
PHIP
PEX7
STC2
RNF139
PANK3
LRRC37A3
ATXN7L2
HOXA4
RABGAP1
HMGN2
RBM26
FAM219B
ZNF326
SCAI
NBPF1
KDM3B
AGO3
PRRC2B
EDEM1
PHF1
KAT6A
FLOT2
ACBD6
FAM131A
POMZP3
SMYD2
TBK1
REV3L
TIMM13
SLC25A22
FSTL3
STRIP1
KANSL1
LSS
ARHGAP35
EPB41
GPX1
B3GALNT2
OPN3
CHML
SLC44A5
H3C2
TM2D3
DERA
ATXN7
KANSL3
H2BC11
H2AC11
ACBD3
SOD2
H1-2
CELF1
DESI2
UBXN2A
ZNF197
TADA1
POMT1
USP21
EGLN1
CLK3
NME3
CIRBP
POLR2C
PDCD2
CNIH4
NDUFB2
ZNF445
PACS1
DAPK3
BOLA3
ATPAF1
AKT2
ADIPOR1
HFM1
H4C5
ZNF581
SLAIN1
TMEM179B
PHACTR2
ADAM17
SCAMP3
ATAT1
SKIDA1
MSI2
STMP1
CD320
ARHGEF11
YBEY
MCM3AP
BACH1
PPP4R2
EPM2A
NOXA1
TRIM65
PLPP5
NEIL1
HDAC10
KIAA1522
KMT5B
CCZ1B
ZNF148
NDST2
NUB1
ABL2
BRAF
TRIM3
C8orf82
TMEM35B
RHOU
PXK
EFCAB2
MLLT6
FUT11
TP53BP2
WIZ
FBXO28
FARP2
C8orf76
PRKAG1
DDX59
WDR37
PEX6
SEC22C
NKTR
C1orf21
PYCR2
LRRC61
ACTR3C
IKZF4
GOLGA1
CLN5
OCRL
FOSL2
UNC119
DENND2B
TBC1D5
TTC21A
GORASP1
KCNJ4
VARS1
ACADM
SSRP1
TOMM20L
C5orf24
NFAT5
SUPT4H1
LIN9
TBC1D10B
MYLPF
PWP2
LOC102724159
TPTEP2-CSNK1E
E2F3
CCDC200
WDR27
C6orf120
MIER1
LIX1L
GDI1
SRSF4
PRKAG2
GGPS1
ARID4B
TPK1
ARFGAP2
B4GALT7
DISC1
ARL5A
TSPAN10
NPLOC4
RNF220
TMEM184B
LRRFIP2
RAD23A
BAG2
KHDRBS1
CISD3
ZNF786
CAMTA1
GAGE2A
FAM20B
SATB1
E4F1
TPGS2
DNAH14
TIRAP
TRAPPC8
MAN1A2
MARCHF7
PATJ
COX5A
WDTC1
MOV10
PARP1
THAP9
H4C3
FAM118A
KMT2C
CZIB
AP1S2
RAP2C
ZNF621
IMPDH2
JAK1
VPS36
C19orf53
SLC35E3
LMO7
MYBL2
KCTD3
ICA1L
ZNF341
GTPBP3
ANO8
GATAD2B
COPS7B
NADSYN1
EXOG
CMTM6
TICRR
GPR137
ZNF35
TRAF4
ROM1
EML3
MKRN1
SMARCD2
MPC2
DCAF6
BTBD1
HNRNPF
MAP3K2
MPP5
REEP2
URB2
TAF5L
LRRC24
GET4
ZNF76
SRCAP
LOC730183
FASTK
GAB2
SIRT7
RAD54L2
ERLIN1
SP1
TASOR2
ZNF771
PHC2
EYA4
CDC42BPA
NF2
SLC37A3
RILP
ARID3B
THRB
ATRIP
HEBP2
SNX5
MGME1
AMMECR1L
PRKRIP1
SP3
TBXAS1
HIPK2
CAPZA2
TM7SF2
TXLNA
PURA
NUDT16L1
POM121C
ZNF77
YWHAZ
LRRC37B
ACAT2
TIGD3
PAM16
PITPNM2
PSMA4
GTF2I
CAPN7
CCSER2
CCSAP
MRPL28
MAT2B
DNAJC11
HGSNAT
CCDC130
SQSTM1
MGAT4B
FOCAD
PPP1CC
TAOK2
RABIF
EZH2
ARHGEF12
SETD6
UBA2
CUL1
GANAB
DOCK7
NID1
BRWD1
MTARC1
PIP5KL1
DSG2
CD276
SETMAR
CSTB
TLL2
NAT10
NCKIPSD
NOTCH2
TBC1D4
LLGL2
STAU1
ZBTB37
GPC4
PUM2
PCBD2
KANSL1L
CSKMT
C11orf98
SAMD1
THAP3
DBN1
STK40
SPECC1L
KIAA2026
URGCP
CHUK
URGCP-MRPS24
GCLC
XYLB
UBA3
LRRC73
IQGAP1
ZNF706
OVCA2
TTC13
ARV1
KIF23
MRPL38
GMPPB
FBXW2
HOXA3
KLHL25
IAH1
SEMA4B
DENND11
IBA57
TFAP4
RC3H2
FYN
ATXN10
CD2AP
MSRB2
CACNA2D3
MAD1L1
GPN2
GFER
STX6
UNC119B
SPSB3
NUBP2
CIZ1
ANKRD36B
DHX9
PHGDH
DNM1
ELOA
MAPK8IP2
FAM207A
LPGAT1
SUMO2
FAM149B1
ECD
PBRM1
GNL3
PTCH1
FPGS
RPL6
PTPN11
RIPK1
CCDC107
GALNT2
PDE8A
NUAK1
AQP11
USP6NL
EIF3CL
EIF3C
SCFD1
FBXO10
NMD3
VWA7
PAFAH1B1
PHF19
TMPPE
GLB1
RUVBL1
EEFSEC
MFSD14A
ACTR8
YBX1
UTP4
DERPC
CHTF8
MIB1
HDLBP
SEPTIN2
STX7
RALGDS
YWHAB
THSD1
SETD5
FANK1
FAM135A
H4C2
CELSR3
ZNF644
PRC1
ATXN2
SSX2IP
TRIM52
ACTN2
GINM1
SELENOH
MARCHF6
JPT2
MYCBP2
BCL7C
ATXN7L3
TAOK1
SNX7
RTN4
PCSK6
ZNF282
VPS26A
KCTD18
TAB2
ZNF860
OSBPL10
SBNO1
OSBPL1A
PDE4DIP
H3C4
H2BC7
H2AC7
RFX1
LMNB1
NCOA2
TWF1
UNC5A
NOMO1
MBOAT2
GAGE7
GAGE5
GAGE4
GAGE2B
GAGE12I
POGLUT3
STON2
CAPRIN2
DCUN1D4
SH3D19
NMB
NFKBIA
NANS
LONP1
CYREN
CATSPERD
IMPACT
IL13RA1
ZNF629
TPM4
DCT
ZMYM4
RANBP17
SLC44A3
C1orf198
TTLL4
COG2
CEP350
MGRN1
TLCD3A
DGKH
ARSB
DEK
UBE2R2
RNF180
CTNNB1
ROGDI
FDX2
CUL9
ZFYVE9
SMARCB1
FAM53C
CDC25C
DTNBP1
TLE4
UBE2J1
FGF18
NXF1
RPP21
PRKACB
ATP1B1
MRPL41
AKAP13
NFIB
PRKD3
SRF
RNF135
MAP2
KLHL22
RAP1A
VARS2
NPRL3
N4BP3
H4C4
RALB
STUM
MYL6
MOCS2
BMP8B
TMEM121B
DIS3L
LRCH2
SBF2
STYX
HAGHL
SH3GLB1
MNX1
DDX17
CSRNP2
NUCKS1
RNF187
VDAC3
POLR2D
GTDC1
RHOBTB1
RNF217
DRAP1
C11orf68
CDK11B
CDK11A
B3GAT3
ZBTB2
TLK1
RP9
CBX3
NLRX1
NPM3
FOXJ3
MLXIP
DEGS1
SLC22A23
RASL10B
TNFRSF13C
TRIB3
SP2
HIVEP1
NADK
ZMYND11
TUBB2A
KAT2B
DLK2
HSPG2
RNF38
THAP12
GVQW3
MAPKAP1
MRPS24
SOCS1
TET2
PHLDB2
TIGD1
EIF4E2
TDRD7
MTMR3
STOML1
HNRNPAB
EIF4ENIF1
EIF2D
SPATC1L
FAM228B
SF3B6
ING5
NOM1
MTX1
GALNT11
SLC12A5
NGLY1
THBS3
WIPI1
ZER1
RPAP3
ZNF384
PDXDC1
BMP2K
SGPL1
HNRNPA3
CCDC71
RALA
MAPKAPK2
TMEM120A
CEMP1
FEZ2
PIAS1
IGF1R
RTN1
PKNOX1
FAM122C
FAM122B
CNOT11
RAB11FIP2
TMEM129
TACC3
SMARCC2
ZFR
CKAP2
KIFBP
KCTD1
NEXN
PDCD4
C14orf28
SEC16A
C9orf163
UPF3A
C7orf25
BPTF
MTG1
NEK7
B4GALT6
SPTSSA
MRTFA
U2AF1L5
U2AF1
BAZ1B
KIF7
CDH24
SLC12A6
NR1D2
NKIRAS1
NPTN
ZBTB44
SPATA9
RHOBTB3
HUS1
DIPK1A
UBE2A
HSF2
HPCA
ADSS2
SFT2D3
PHC1
ZBTB12
C2
GSN
RAB14
NPHP3
ADAP2
GIGYF2
VTI1B
CALM1
ZNF740
CSAD
SRA1
TATDN2
SORT1
HP1BP3
JUP
TOR1B
VANGL1
STX17
NCKAP1
METRN
CCDC88A
ZNF652
HLCS
PRRG4
FZD2
MPND
CEP120
ZBTB24
ZNF24
ZNF584
TCF7L2
HMGN1
CHD1L
KAT8
INPP5K
SPIN1
PITRM1
SMARCA1
CORO1B
C9orf40
GPAT4
MED14
CFL2
PRKAA2
UBTD2
YTHDF2
PTBP1
HOMER2
H2BC4
H2AC6
DEDD
NBPF15
ATXN2L
ZBTB20
SPOUT1
PRPF40B
SLC26A6
PSMD3
PGBD5
DUSP14
TOP2B
AP1S3
PRSS23
MIA3
SCAPER
PRPSAP2
VRK2
NRIP1
ACOX3
PNMA1
SH3GL3
FAM83E
RCCD1
MIF4GD
DPY19L3
C18orf21
C1orf115
EOMES
TMEM267
COX19
GDPGP1
CIB1
CCDC77
DSE
CLSPN
SPAG9
KDM5A
ANKRD18B
PAFAH1B2
SDC4
LARP4B
FAM117A
AKTIP
SURF6
PSEN2
ARL8B
TARBP1
XPR1
ARFGEF2
MCOLN3
ZNF41
FBXW11
RCE1
LUC7L2
MCL1
ZSWIM8
KIAA0232
FBXW4
SGK3
OMA1
DAB1
TULP3
NEMP2
UBE3C
XPC
LSM3
KIAA0895
EZR
MARK2
GNG4
ZNF879
EDARADD
TSG101
AATF
KBTBD8
DHX30
RPP38
PDE4B
EBPL
NDUFS3
KBTBD4
DIDO1
SLC35A3
OTX1
SMAD5
PFN4
ROBO2
SUFU
PANK1
FA2H
ACLY
HDGF
TBC1D13
SRRT
DIAPH1
UBP1
MGAT1
SOS2
CREBRF
JARID2
NIT2
ELAPOR2
DENND1B
TLE3
UBE2Z
H2BC13
H2AC13
ZKSCAN2