ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708037 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◣ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ RBM39: STRING

H4C9
H2BC12
H2AC12
B4GALNT3
SNRPB2
H2BC11
H2AC11
PMF1-BGLAP
PMF1
H4C2
H3C2
H2AC4
H4C12
H4C11
H2BC14
H2AC14
SPATC1L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H2BC21
H2AC21
H2AC20
H2BC15
H2AC15
FRG2
FRG2C
H3C12
H2BC17
H2AC17
ARL4D
NSFL1C
EAPP
IQSEC3
EXOC2
PEX3
ADAT2
NOMO3
ABCC6
EIF1
UNK
H3-3B
SRSF6
H2BC5
H1-4
PRDX1
NOMO2
STX16
RPS12
CNOT3
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3
NOMO1
MRPL44
WDR74
STX5
MED23
TMEM242
POLR3E
PSMD3
UBC
PSMF1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
FAM53C
CDC25C
FUS
SRSF2
MFSD11
METTL23
NOTCH2
RPS20
GTF2H2C
GTF2H2C_2
ZC3H6
METTL9
TBC1D3J
KANSL3
FER1L5
PDE6D
COPS7B
HERPUD1
MAT2A
PALB2
DCTN5
TM9SF1
IPO4
NACC2
CPPED1
GTF2H2
EEF1A1
SNX16
NPIPA3
NPIPA2
DHRS2
ENOSF1
CTNNB1
NXF1
MTRNR2L8
TGM1
RABGGTA
CBWD5
CBWD3
SRSF7
MTERF4
UNC45B
NLE1
DDX1
HSPA5
NPAS4
PLA2G10
KIF5C
PCK2
NRL
RPSA
CCDC200
MARCHF7
SCFD1
PET117
KAT14
SLC9A1
CCDC88A
H1-2
H3C10
H2BC13
H2AC13
MTIF2
HMBS
H2AX
DPAGT1
ZSCAN12
RPS15A
RPL5
AAR2
NGB
PRMT5
TRIP4
PCLAF
H4C5
H3C4
H2BC7
H2AC7
H4C4
ACTB
CBWD6
SLC39A3
BRD2
SCAND1
CLTC
CALM2
ATF4
P4HA1
STX18
RBM39
TMEM230
PCNA
GTF3C3
C2orf66
DCAF10
ZNF76
NME1
TBL3
RPS2
RPL3L
RNF151
NDUFB10
EIF2D
SLC35C2
RBSN
DPY19L4
KIF16B
HNRNPA2B1
CBX3
ATF7IP2
MRPL39
JPT1
RPLP1
NUBP1
WTAP
SOD2
MTHFD2
HSPA1B
TRIM25
RPLP0
GCN1
TMEM41A
HSPE1-MOB4
HSPE1
HSPD1
MTF2
PLEKHM3
METTL25
CCDC59
GTF2A1
POLG2
DDX5
CEP95
MAPK11
IL17D
MTRNR2L9
SLC39A10
RWDD1
SNRPB
TTPAL
NABP1
SUPT5H
RPS16
E2F6
OXA1L
EIF4A3
SCGB1C2
SCGB1C1
ODF3
DTD2
ARL6IP1
ANKRD36C
TMEM167B
FRA10AC1
RPS23
ATP6AP1L
TIGD1
EIF4E2
ZCCHC4
HEATR5A
AHSG
DUX4
POLR2J3
UBE2S
TSSK4
TSGA10
MDP1
CHMP4A
MTRNR2L1
CDK5RAP1
RPS3
MANBAL
ACYP2
SMARCD2
ITGB2
ATF3
TTI1
RPRD1B
RPL37A
TOB1
FAM118A
H3C13
H2BC18
TRPC4AP
SRCAP
LOC730183
FAM227B
DTWD1
OR2T1
C1orf198
RGPD8
RGPD6
RGPD5
MCL1
DMAP1
MRPL3
ARHGEF12
SLC24A1
HNRNPAB
NDUFAF8
NANP
RAF1
CCNL1
SLC25A21
ZCCHC3
C20orf96
KDM8
YARS1
S100PBP
MRPS23
ZKSCAN2
ADAMTS9
PPP4R3B
ACSL3
RPL3
GOSR2
IER5
CCNI
NUF2
C14orf93
LDHA
PTCD1
CPSF4
UBE2F
RUSF1
RMDN2
GABPB1
MTRNR2L2
MSH3
DHFR
STAT1
SLC16A1
LRRC59
COMMD1
CCT4
ZNF337
TOB2
LOC102724770
DGCR6
ZNF609
TMEM18
TAF15
KIAA1586
C19orf48
RPL10A
ASXL1
C6orf226
H2BC4
H2AC6
UBOX5
GOLGA6L10
FASTKD5
ANKRD36B
ZBTB4
SLC35G6
POLR2A
OAZ1
ZNF384
DNAJA1
APTX
GTF2B
CHGB
C6orf62
TOP3B
SRSF3
EDC4
RPL23
ATR
EIF2S2
SKP1
GCLC
RAB37
FAM174C
CIRBP
ZNF219
TMEM253
TLCD1
RPL23A
RAB34
PROCA1
NEK8
HNRNPH1
PIP4K2B
MOB4
INO80D
DARS1
PABPC1
ZSCAN9
DHRS4L2
CCDC97
ARL14EP
TTC4
CBWD1
TATDN3
NSL1
THUMPD1
SMARCE1
BMS1
SURF6
SPHK2
SNX5
RPL18
NDE1
MGME1
MARF1
FAM83E
MRPS31
ALKBH3
METTL8
DCAF17
FAM234B
EGR1
UQCC3
LBHD1
CSKMT
C11orf98
ANKRD46
PDE11A
UGP2
SEC13
ACIN1
HECTD1
C2orf88
CCNC
TNFRSF21
PLK1
MRPL58
PSMC5
FTSJ3
CCN2
PRORP
PPP2R3C
C16orf89
ATXN2L
AP1G2
ALG1
CYCS
RPL37
CARD6
DCAF11
ALG10
TACO1
SCML1
RPL27A
TAF1D
C11orf54
CTR9
WDR11
SRSF11
ACVR1
PBLD
HNRNPH3
RBBP6
PSMA6
MAGEF1
NDUFS7
MAN2C1
TUBGCP3
SLX4IP
PPP1R3E
MKKS
DCP1A
BCL2L2-PABPN1
BCL2L2
TRDMT1
PDRG1
MIA2
FOS
DGUOK
XRN2
ANKRD36
SEC14L1
WDR31
REPS1
CRBN
BSPRY
ARL15
SMIM12
OR13H1
CLK1
VPS16
PCED1A
RPN2
MROH8
TEFM
IRF9
COQ7
AGK
STAT3
RHEBL1
KMT2D
NBN
UBFD1
EARS2
CZIB
AJUBA
MTMR2
SLC38A2
GORASP2
ZWILCH
SNAPC5
RPL4
PARPBP
NUP37
HAUS4
RANBP9
PTP4A1
CSNK2A1
TUBA1B
NDUFC2-KCTD14
NDUFC2
SENP1
RDH14
PFKM
GSTA4
POMZP3
PCIF1
NAGK
NUP214
TDG
C12orf73
MTX2
FAM83D
DHRS4L1
MYL12A
RPS3A
IQUB
WASHC1
TMEM94
SLC3A2
SDCBP
MRTO4
HSP90AA1
EMC1
LRRC37A3
VAMP4
NCOA3
JRKL
HUS1
CFL2
CCDC82
PSMD14
NOP14
GRK4
EXOSC6
FAM98B
TBC1D19
KPNB1
DIDO1
SEC23A
MFF
KANSL1
INO80C
TINF2
SUPT3H
STAMBP
PTPN2
NEDD8-MDP1
NEDD8
MRPL35
IMMT
GMPR2
STAM2
NT5DC1
ISOC1
RIF1
RPL19
CACNB1
MRPL16
PYROXD1
OTUD7B
VWA8
RBM34
PGBD1
PBK
NXT1
CSTF1
AURKA
NCOA7
GDAP1
SECISBP2L
SLC20A1
NUDCD3
ZNF391
ZNF451
ZNF248
PCTP
OR9A4
NDUFAF3
MAIP1
KPNA2
IMPDH2
HSPA9
DALRD3
CHRFAM7A
TEDDM1
GLUL
STMN3
RTEL1
CASC3
LMNB2
KAT7
CHMP3
TRA2B
SRSF1
RPL31
TRMT11
DEFB132
ADI1
TBC1D5
C2CD5
SLC44A1
VRK2
SULT1A4
SULT1A3
SLX1B
SLX1A
RRN3
RBL1
PHIP
LMLN2
C14orf119
BOLA2-SMG1P6
BOLA2B
BOLA2
PPIA
FN1
EIF3C
CCDC116
YDJC
AARS2
TOMM6
PRICKLE4
FRS3
RNF103-CHMP3
RMND5A
MYLIP
GFOD2
HSP90AB1
NEU1
XPOT
TPK1
SLC35B2
NCL
CEBPE
PTPN4
POLR2C
MAML3
LINC02210-CRHR1
TEX14
TBP
RAD51C
PSMB1
POLR2J2
PKP4
PELO
NUDT4B
NUDT4
ITGA1
CCDC148
APBB2
AGL
STX6
ZFHX2
TOX4
THTPA
TAF3
SYS1
RAB2B
COG2
CMTR2
PCBP2
PIGBOS1
PIGB
DHRS4
MRPS11
MRPL46
KAT6A
RPS8
HEXIM2
ATP5MC2
TUBB4B
STPG3
FAM166A
MRPS33
STXBP4
RTN4RL1
RNF146
MRPL2
KLC4
DPH1
CUL7
COX11
RBM28
CDH24
TTC21B
RNPS1
DDIT4
ADRA1D
INTS12
GSTCD
TMEM267
SDR39U1
RNF39
RALGAPA1
RAD54L2
PTRHD1
PPP1R11
POLR1H
MTHFD2L
HDAC4
GOLGA6L3
CENPO
THOC1
PRADC1
CCT7
ZFP1
MICU2
IST1
DENR
USPL1
HMGB1
AURKAIP1
TUFT1
TP53I3
TBPL1
SF3B6
PRKAG1
LIMS1
FAM228B
ID1
SYT7
GTPBP10
WDR43
SRP54
NOP56
ITGAV
TMEM254
KDM3B
HDDC2
ANKRD17
UTP4
DERPC
CLCN5
CHTF8
DDX19B
AARS1
SREK1
RBMXL1
RASEF
KYAT3
CCNG1
H3C6
H2BC8
H2AC8
ZSCAN30
HINT3
U2SURP
LMAN1
FERMT1
AGFG1
RBM45
ERCC6L2
SCARB1
IRF2BP2
FAM86B1
ADPGK
MAMDC2
HNRNPC
PHF3
NOL10
MIPOL1
PPP2CB
RTF2
RPL17-C18orf32
RPL17
HOMEZ
GBE1
C5orf24
C18orf32
DR1
SESN2
GGA2
AFF1
WIPF2
TMEM186
TMEM177
TEX10
PMM2
PFDN4
MRPL52
MMP14
DDX59
CHD8
CDC7
ATP5F1E
ASNS
NBPF1
DUSP1
ZNF513
SNX17
NPIPB9
EIF2B4
ANKRD40
TDP2
SLC9A8
KMT2A
DYNLRB1
ACOT13
MRPL40
HIRA
RNF6
NPM1
LANCL1
CPS1
SLC30A6
LZTR1
ZC3H15
ZNF282
OMA1
GPN1
DAB1
CCDC121
ZNF207
C17orf75
REXO5
ERI2
E2F3
CYLD
COQ8A
FAM133B
NFE2L2
TFRC
SLC35B1
PARP2
CCNB1IP1
SRF
RSPH3
RBBP9
RAB5IF
GCFC2
G2E3
ETV4
CUL9
BRWD1
UNC50
TMEM14A
TGOLN2
SRSF10
RETSAT
NDUFB2
GOLGA6L4
ELMOD3
COA5
STX10
IER2
MRPS7
MRPS35
MIF4GD
GGA3
EDEM2
ACTR3
SPAG11B
VPS26C
USP40
TIMMDC1
SNX11
RMI1
PIGU
MRPL45
HNRNPK
ERGIC3
CDK1
CBX1
CITED2
THUMPD2
PRKRA
PJVK
JPH4
GLS
MRPS16
DNAJC9
RPS6
NPHP1
NARF
MTLN
FTH1
EEF2
CYBC1
CSRNP2
GDF15
ERMARD
RTN4
VTA1
NMBR
VSNL1
TBC1D14
RNF138
RAD51AP2
PSMD7
PNPO
MCM7
LRRC25
HMGCS1
DNAJC16
CSE1L
CASP9
AP4M1
PARK7
C10orf88
SMIM8
RIPK1
GJB7
GZF1
FGGY
BCKDHB
TRIP12
SLC39A7
SLC32A1
RXRB
RING1
NAA20
HSD17B8
FBXO36
COL11A2
ZNF24
RBM12
NFAT5
MRPL27
EME1
CPNE1
ATP5MC3
IARS1
TANK
CHD2
TMEM14B
SRP9
SEC62
NUP62
MSANTD2
LSM8
IL4I1
FAM86B2
EPM2A
ATF5
UBE2D3
EIF4G2
SLC12A5
TMBIM4
MEMO1
TOP1
TEP1
TCAF1
SDC4
OR5F1
MAT2B
FTCDNL1
AP5S1
SLC1A5
ZCCHC9
TRMT61B
TMEM170A
RFX3
PCF11
IER3
GADD45A
FLOT1
CHD9
CFAP20
ZNF468
VCPKMT
LATS1
FBXO34
CYP20A1
AMACR
KMT2E
MTERF1
NFYC
TGM2
SAYSD1
RPL29
POFUT1
PLAGL2
NEMP2
NCOA5
MAPK1IP1L
GOPC
BZW2
APOB
ANKMY2
PPP1R10
MRPS18B
ATAT1
THAP9
SEC31A
ZCCHC7
TMEM217
TBC1D22B
SRRM2
NFATC3
NDUFV2
KAT8
ID2
ERLEC1
CRLS1
BCKDK
ASB3
VARS2
GTF2H4
MMADHC
TJAP1
SMC3
SLC26A8
SERINC3
RPIA
PKIG
MAPK14
KRT8
KRT18
FUCA2
CALU
AGPS
ADARB1
FAN1
SAR1B