ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708037 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◣ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ RBM39: STRING

H2BC12
H2AC12
SNRPB2
H2BC11
H2AC11
H3C2
H4C11
SPATC1L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H2BC21
H2AC21
H2AC20
H4C12
H2BC17
H2AC17
NSFL1C
IQSEC3
EXOC2
PEX3
ADAT2
ABCC6
EIF1
H3-3B
SRSF6
H1-4
H2BC5
PRDX1
STX16
RPS12
MRPL44
WDR74
MED23
TMEM242
POLR3E
PSMD3
UBC
PSMF1
H4C15
H4C14
FAM53C
CDC25C
FUS
SRSF2
MFSD11
H2AC19
H2AC18
NOTCH2
RPS20
GTF2H2C
GTF2H2C_2
ZC3H6
METTL9
KANSL3
COPS7B
HERPUD1
MAT2A
PALB2
DCTN5
IPO4
CPPED1
GTF2H2
EEF1A1
SNX16
ENOSF1
CTNNB1
NXF1
MTRNR2L8
RABGGTA
CBWD5
CBWD3
SRSF7
MTERF4
DDX1
HSPA5
NPAS4
PCK2
NRL
RPSA
CCDC200
MARCHF7
SCFD1
PET117
KAT14
SLC9A1
CCDC88A
H1-2
H2BC14
H2AC14
MTIF2
H2AX
ZSCAN12
RPS15A
RPL5
AAR2
PRMT5
TRIP4
H3C4
H2BC7
H2AC7
ACTB
CBWD6
SLC39A3
BRD2
SCAND1
CLTC
CALM2
P4HA1
ATF4
STX18
RBM39
H2BC13
H2AC13
TMEM230
GTF3C3
DCAF10
ZNF76
NME1
RPS2
EIF2D
SLC35C2
RBSN
DPY19L4
KIF16B
HNRNPA2B1
CBX3
ATF7IP2
MRPL39
JPT1
RPLP1
NUBP1
WTAP
SOD2
MTHFD2
HSPA1B
TRIM25
RPLP0
TMEM41A
HSPE1-MOB4
HSPE1
HSPD1
MTF2
PLEKHM3
METTL25
CCDC59
GTF2A1
DDX5
CEP95
MTRNR2L9
SLC39A10
RWDD1
SNRPB
TTPAL
NABP1
RPS16
E2F6
OXA1L
EIF4A3
DTD2
ARL6IP1
ANKRD36C
FRA10AC1
RPS23
ATP6AP1L
TIGD1
EIF4E2
ZCCHC4
HEATR5A
POLR2J3
UBE2S
TSGA10
CHMP4A
CDK5RAP1
RPS3
MANBAL
ACYP2
SMARCD2
ATF3
TTI1
RPRD1B
RPL37A
TOB1
H3C13
H2BC18
TRPC4AP
SRCAP
LOC730183
FAM227B
DTWD1
RGPD8
RGPD6
RGPD5
MCL1
DMAP1
MRPL3
ARHGEF12
SLC24A1
HNRNPAB
NANP
RAF1
CCNL1
SLC25A21
ZCCHC3
KDM8
YARS1
S100PBP
MRPS23
ZKSCAN2
PPP4R3B
RPL3
GOSR2
H2BC15
H2AC15
IER5
CCNI
NUF2
LDHA
PTCD1
CPSF4
UBE2F
RUSF1
RMDN2
GABPB1
MTRNR2L2
SLC16A1
NOMO2
LRRC59
COMMD1
CCT4
ZNF337
TOB2
ZNF609
TMEM18
TAF15
KIAA1586
C19orf48
RPL10A
ASXL1
C6orf226
H2BC4
H2AC6
UBOX5
FASTKD5
ANKRD36B
ZBTB4
POLR2A
OAZ1
ZNF384
DNAJA1
APTX
GTF2B
CHGB
TOP3B
SRSF3
EDC4
RPL23
ATR
EIF2S2
SKP1
RAB37
CIRBP
RPL23A
HNRNPH1
PIP4K2B
MOB4
INO80D
DARS1
PABPC1
DHRS4L2
CCDC97
ARL14EP
TTC4
CBWD1
TATDN3
NSL1
H3C15
H3C14
THUMPD1
SMARCE1
BMS1
SURF6
SPHK2
SNX5
RPL18
NDE1
MGME1
MARF1
MRPS31
ALKBH3
METTL8
DCAF17
CSKMT
C11orf98
EGR1
ANKRD46
UGP2
SEC13
PDE11A
ACIN1
HECTD1
C2orf88
CCNC
TNFRSF21
PLK1
MRPL58
PSMC5
FTSJ3
CCN2
PRORP
PPP2R3C
ATXN2L
AP1G2
ALG1
CYCS
RPL37
DCAF11
ALG10
TACO1
SCML1
TAF1D
C11orf54
NOMO3
CTR9
WDR11
SRSF11
ACVR1
PBLD
HNRNPH3
RBBP6
PSMA6
MAGEF1
NDUFS7
MAN2C1
TUBGCP3
SLX4IP
DCP1A
BCL2L2-PABPN1
BCL2L2
TRDMT1
PDRG1
MIA2
FOS
DGUOK
XRN2
ANKRD36
SEC14L1
WDR31
REPS1
CRBN
ARL15
SMIM12
H2AC4
CLK1
VPS16
PCED1A
RPN2
MROH8
TEFM
IRF9
COQ7
AGK
STAT3
KMT2D
NBN
UBFD1
EARS2
CZIB
AJUBA
MTMR2
SLC38A2
GORASP2
SNAPC5
PARPBP
NUP37
HAUS4
RANBP9
PTP4A1
CSNK2A1
TUBA1B
NDUFC2-KCTD14
NDUFC2
SENP1
RDH14
PFKM
GSTA4
POMZP3
PCIF1
NAGK
NUP214
C12orf73
MTX2
FAM83D
DHRS4L1
ZNF219
RPS3A
MYL12A
WASHC1
TMEM94
SLC3A2
SDCBP
MRTO4
HSP90AA1
EMC1
LRRC37A3
VAMP4
NCOA3
JRKL
HUS1
CFL2
CCDC82
PSMD14
EXOSC6
FAM98B
TBC1D19
KPNB1
DIDO1
STAT1
SEC23A
MDP1
KANSL1
INO80C
TINF2
SUPT3H
STAMBP
PTPN2
IMMT
STAM2
NT5DC1
ISOC1
RIF1
RPL19
MRPL16
ZSCAN9
PYROXD1
OTUD7B
VWA8
RBM34
PGBD1
PBK
NXT1
CSTF1
AURKA
NCOA7
GDAP1
SECISBP2L
SLC20A1
NUDCD3
ZNF391
ZNF451
ZNF248
PCTP
MAIP1
KPNA2
IMPDH2
HSPA9
GLUL
RTEL1
CASC3
KAT7
CHMP3
TRA2B
SRSF1
RPL31
TRMT11
ADI1
C2CD5
SLC44A1
VRK2
TBC1D5
SLX1B
SLX1A
RRN3
RBL1
PHIP
C14orf119
BOLA2-SMG1P6
BOLA2B
BOLA2
PPIA
FN1
EIF3C
YDJC
AARS2
RMND5A
PRICKLE4
MYLIP
GFOD2
FRS3
HSP90AB1
NEU1
XPOT
TPK1
NCL
PTPN4
POLR2C
MAML3
LINC02210-CRHR1
TEX14
TBP
RAD51C
PSMB1
POLR2J2
PKP4
PELO
NUDT4B
NUDT4
ITGA1
CCDC148
AGL
STX6
ZFHX2
TOX4
TAF3
SYS1
RPL27A
RAB2B
COG2
CMTR2
PCBP2
PIGBOS1
PIGB
DHRS4
MRPS11
MRPL46
KAT6A
RPS8
HEXIM2
ATP5MC2
TUBB4B
MRPS33
STXBP4
RNF146
DPH1
CUL7
COX11
RBM28
CDH24
TTC21B
RNPS1
DDIT4
ADRA1D
INTS12
GSTCD
TMEM267
SDR39U1
RALGAPA1
RAD54L2
PTRHD1
PPP1R11
MTHFD2L
HDAC4
CENPO
H4C5
THOC1
CCT7
ZFP1
PRADC1
MICU2
IST1
DENR
USPL1
HMGB1
AURKAIP1
TUFT1
TBPL1
SF3B6
PRKAG1
LIMS1
FAM228B
SYT7
GTPBP10
WDR43
SRP54
NOP56
ID1
ITGAV
TMEM254
KDM3B
HDDC2
ANKRD17
UTP4
DERPC
CHTF8
DDX19B
AARS1
SREK1
RBMXL1
KYAT3
CCNG1
H2BC8
H2AC8
ZSCAN30
HINT3
U2SURP
NOMO1
LMAN1
FERMT1
AGFG1
RBM45
ERCC6L2
SCARB1
ADPGK
HNRNPC
THTPA
PHF3
NOL10
MIPOL1
PPP2CB
RTF2
RPL17-C18orf32
RPL17
HOMEZ
GBE1
C5orf24
DR1
SESN2
GGA2
AFF1
WIPF2
TMEM186
TMEM177
TEX10
PMM2
PFDN4
MRPL52
DDX59
CHD8
CDC7
ATP5F1E
ASNS
NBPF1
DUSP1
SNX17
EIF2B4
ANKRD40
TDP2
SLC9A8
KMT2A
DYNLRB1
ACOT13
MRPL40
HIRA
RNF6
NPM1
LANCL1
CPS1
SLC30A6
LZTR1
ZC3H15
ZNF282
OMA1
GPN1
DAB1
CCDC121
C17orf75
REXO5
ERI2
E2F3
CYLD
COQ8A
FAM133B
NFE2L2
TFRC
SLC35B1
PARP2
RSPH3
RBBP9
RAB5IF
GCFC2
G2E3
ETV4
CUL9
BRWD1
UNC50
TGOLN2
SRSF10
RETSAT
NDUFB2
ELMOD3
COA5
SULT1A4
SULT1A3
MRPS7
MRPS35
GGA3
EDEM2
ACTR3
ACSL3
VPS26C
USP40
TIMMDC1
SNX11
RMI1
PIGU
MRPL45
HNRNPK
ERGIC3
CDK1
CITED2
THUMPD2
PRKRA
PJVK
GLS
RPS6
NARF
MTLN
FTH1
EEF2
DNAJC9
CSRNP2
ERMARD
RTN4
VTA1
NMBR
VSNL1
TBC1D14
RNF138
PSMD7
PNPO
MCM7
HMGCS1
DNAJC16
CSE1L
AP4M1
PARK7
C10orf88
SMIM8
RIPK1
GZF1
FGGY
EAPP
BCKDHB
TRIP12
TM9SF1
SLC39A7
RXRB
NAA20
FBXO36
ZNF24
RBM12
NFAT5
MRPL27
EME1
CPNE1
ATP5MC3
IARS1
TANK
TMEM14B
SRP9
SEC62
NUP62
MSANTD2
LSM8
IL4I1
EPM2A
ATF5
UBE2D3
EIF4G2
TMBIM4
MEMO1
TOP1
TEP1
TCAF1
SDC4
MAT2B
FTCDNL1
AP5S1
SLC1A5
ZCCHC9
TRMT61B
TMEM170A
RFX3
PCF11
GADD45A
FLOT1
CHD9
CFAP20
ZNF468
VCPKMT
LATS1
FBXO34
CYP20A1
AMACR
KMT2E
MTERF1
NFYC
TGM2
SAYSD1
RPL29
POFUT1
PLAGL2
NEMP2
NCOA5
MAPK1IP1L
GOPC
BZW2
APOB
ANKMY2
THAP9
SEC31A
ZCCHC7
TMEM217
TBC1D22B
SRRM2
NFATC3
NDUFV2
KAT8
ID2
ERLEC1
CRLS1
ATAT1
ASB3
GTF2H4
MMADHC
TMEM14A
TJAP1
SMC3
RPIA
PKIG
MAPK14
KRT8
KRT18
FUCA2
CALU
AGPS
ADARB1
FAN1
SAR1B
RPS10-NUDT3
RPS10
ZSCAN31
WFDC3
SKIV2L
SELENOT
SDHAF2
RRM2
POLE4
NELFE
GLO1
GAPDH
DNTTIP1
CPSF7
CKAP2L
BRMS1L
ABCD3
DCLRE1B
AP4B1
POLR3B
ZFAND3
TPD52L2
RABL2A
PSD
NKIRAS2
NDUFAB1
MATR3
DNAJC7
CALR
BLOC1S6
RAD54L
TANGO6
SUV39H2
SNRNP200
SLC35B2
RSPRY1
PSME3IP1
MLEC
KLLN
FAM177A1
ASCC1
ANAPC16
FBXW2
ZNF524
UBXN2B
PMS1
ORMDL1
FIZ1
CPE
BIRC6
MED4
UBR2
TCTN3
PNN
LOC110384692
CNOT1
C4B_2
C4B
C4A
AMMECR1L
RPL12
LRSAM1
ITGB3BP
EFCAB7
SGF29
YWHAG
SMIM26
RPL13
PPIL1
KCTD5
GINS1
BCLAF1
ALG10B
TMEM167B
THAP5
MRPS14
ICE2
GSPT1
FAM207A
DNAJB9
ZFP64
LSR
ZNF343
ZNF23
STARD7
SCRN3
RGS9
PIP4P2
CIR1
ADAM17
ACTG1
GMNN
ZNF181
ZBTB9
NAE1
FRG1
ERBIN
CYP51A1
BECN1
VAC14
USP42
STEAP2
RPL36
REV1
PCID2
MFAP3
KCTD18
HEXB
FAM114A2
EIF3CL
CUL4A
BTF3
ZNF124
PDCD2
EIF4A1
APPBP2
ANXA4
DDX3X
YWHAB
TMEM106B
PON2
POLR2J
NUDT15
NDUFA12
KLHL8
KDSR
DYNLL1
CCZ1B
C1orf115
ASB1
TJP3
NR1H3
ACP2
NET1
TTLL4
TMEM214
RPL26
GTF2H3
GTF2A2
EIF2B1
CMC1
AHI1
DRG2
SPOCD1
ZSCAN16
ZNF770
SDCBP2
RAD50
RABL2B
PPP1R3C
MPHOSPH10
MCEE
KPNA1
COX18
BAG2
EIF4A2
EEF2K
GID8
TFB1M
SUPT4H1
HEXA
GSTK1
CUL5
POLG
HEXIM1
TM7SF3
PPA2
PLS1
FAHD2A
DCPS
C16orf95