ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX096353 | LS-180
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◣ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

CXCL9
ART3
CCDC200
HOXA3
HOXA5
FHL2
TMEM107
C1orf100
DUT
HOXB8
TFAP2A
CDK5RAP3
TSPAN3
LRRC19
C20orf204
DESI2
AP1M1
USH1C
HOXB4
HOXB3
MAP3K14
LGALS3
LOC102723996
ICOSLG
FCAMR
QSOX1
TBPL1
AP2S1
CLRN3
NFKBIZ
LAMA3
UGT1A1
CELA3A
FLNB
RGMB
UGT2B10
TM4SF4
DEPP1
HNF4G
RAB6D
HOXA4
WDR74
NAPEPLD
OR9Q2
FAM53B
HOXC5
TRIM2
SLC25A27
CYP39A1
RNASE6
FBXO31
ME3
TSPAN8
GBF1
ZNF563
QSER1
RAMP1
MYO18B
CDH17
EPRS1
ZNF608
CERK
KIF16B
ZZEF1
CYB5D2
SPATA46
C1orf226
SLC7A6
WBP4
ELF1
SLC6A7
NXPE2
DNAJC25-GNG10
DNAJC25
PDE4D
USP7
SH3D19
GEM
GUCY2C
VSX1
MLPH
MALRD1
KIAA1217
DUS4L-BCAP29
DUS4L
COG5
SPAM1
TXNRD1
CRYM
TMEM54
ACVR1B
RNF114
IL33
FGFBP1
IQGAP2
MAVS
USP54
CACHD1
SERPINB1
ERLIN2
TNFSF11
SLC17A4
GGH
C3orf85
AKR1C3
WWC1
REG1B
CLGN
FBN2
PMEPA1
CLOCK
SLC30A10
CDC14A
MLF1
KIAA2012
TES
IGFL4
CASP4
ZNRF3
PHF19
NGB
RNF186
KRT8
GOLPH3
RGS2
ARHGAP17
NAA60
NOS2
PDE6A
ADGRE5
HOXA9
HOXA7
HOXC6
SLC12A7
PPARG
SEC23A
CYTIP
ZCCHC14
RNF24
ABLIM1
CDK11B
RBM25
RHOH
ADD3
ANO4
TPD52
SLC3A1
SPRED2
LDLRAD4
NWD1
CRYBG1
PIGR
RPUSD4
FAM118B
ACCS
HESX1
APPL1
INAVA
WASHC1
PRDM4
MEIS1
INTS9
HMBOX1
HNMT
JAML
NOX1
WDR77
ATP5PB
TBC1D30
ROCK2
DEPDC7
ZNF3
HKDC1
SIRT4
ZBTB45
SEMA3C
ST6GALNAC4
PKP2
CELA3B
CRLF3
C1orf105
SF3B4
MTMR11
CREB3L1
TMCO3
DCUN1D2
B4GALT6
AMHR2
BTNL3
CTTNBP2NL
DNPEP
RIN2
CEACAM16
MBNL2
HPGD
KLHL30
FARSB
SYNE3
MEP1A
MAMDC2
UCK1
FAM135A
CIDEC
BATF
TMEM87B
GOLIM4
EIF4G3
DUSP18
SGK3
SYBU
KRT19
LRRC31
ZCCHC8
NPSR1
ADGRF4
BARX2
NOSTRIN
PTPRF
H3C15
H3C14
H2AC19
H2AC18
MS4A18
EBAG9
SMC2
TUBG2
CLDN4
C19orf33
ARHGEF18
OR9Q1
TFIP11
CDCA8
C1orf109
HEPH
GSG1
LRRC66
MCTS1
RASSF10
AMACR
MELTF
TGIF1
HSP90B1
LGALS4
TMEM205
RAB3D
MYH4
CCDC159
RAD54B
FSBP
RABEPK
GALNT1
FABP2
SLC20A1
GNA14
RNF31
PSME2
EMC9
NPIPB13
NPIPB12
MED13
PTPRB
IBTK
SLC14A2
PRSS3
NSFL1C
CYP2R1
E4F1
NRAS
ETHE1
NNAT
BLCAP
SRI
ELAPOR2
TM7SF3
ACAN
SFR1
STARD3
PPP1R1B
ARL14
MIDEAS
DUX4
TMEM69
GPBP1L1
WEE2
DENND11
MGAM2
CPA6
PTPN6
C12orf57
TSHZ1
PHACTR4
ENGASE
FAM193B
SMIM31
NPIPB5
SERPIND1
CDC14B
VPS37D
FAM107A
ZNF91
ABCB11
ANXA11
GALK1
CLIC5
CAAP1
SLC44A3
CDK11A
NR6A1
NXPE1
TM9SF3
SMG7
GCNT4
SOX30
C5orf52
PPP1R3A
PDXDC1
MYRF
FOXN3
NOS1AP
NPIPB4
NPIPB3
GGT1
UTS2R
KIF26B
ZNF366
TMEM45B
TDGF1
RPS6KA1
HMGN2
USP6NL
TCF12
UGT1A8
SLAMF8
LENG9
CAMK2G
ERGIC1
TRIM15
TRIM10
PLA2G6
CLSTN1
PRKCZ
PTPRR
BAMBI
MATR3
TDRD1
CCDC186
RIPK4
PIK3C2A
HEPHL1
AKTIP
MRO
MGAT5
PRSS41
LRIG3
GSDMB
PDE4A
SCAF11
ZKSCAN1
KLC1
ETFA
PRAG1
PHF8
SDF4
B3GALT6
CMTM1
TAOK3
RP1L1
STYXL2
GPA33
FRMD3
ZFAND6
RNF144A
CASP5
LRRC4
SCEL
TNFSF15
PLEKHG1
KNL1
SGO2
FAM114A1
LEKR1
TINAG
TMEM247
GMDS
HOXC4
TAPT1
NHSL1
CBLIF
ZBTB24
ANKRD40CL
PAK1
RNF43
DNMBP
C1QTNF1
VWA2
KRT6B
UGT2B17
COX20
CTXN3
ZFAND3
MINDY3
TOE1
MUTYH
GHITM
DPYSL2
MACC1
MARCHF8
SLC12A2
TUBAL3
ZNF282
ZBTB38
SH3BP4
TM2D2
ADAM9
ZNF577
GSDMA
G3BP2
ANXA2
TRIM25
C1QTNF6
TOMM40L
APOA2
TUT1
FURIN
KLF5
PYGB
PHKG2
ZNF438
PLAAT2
ERAP1
NEBL
PIWIL1
TMEM171
SELENOW
GSPT1
ATP2B4
LOC388282
KIFC3
AMOTL2
ZSWIM5
MADD
TSPAN12
RAB5B
SERP2
LOC102723360
FBXO32
MAP3K13
TCIM
KDSR
CMBL
C3orf52
IFRD1
MMP10
ESRP2
MBNL1
DPEP1
BCL10
SRP9
KAZN
RASGRF2
FANK1
GRHL3
TARDBP
OSBPL1A
SLC11A2
HINT1
CYP4X1
NT5C3A
CDH11
ERRFI1
TLCD5
SMARCA2
LIMA1
ARHGDIB
SGCB
MAPRE3
LIG4
ABHD13
CDC6
EPHX2
NUAK2
ECT2
ANTXR2
MINPP1
GDPD3
IL20RA
CA9
ARHGEF39
DCP1A
REG4
FUT2
PRR5L
BTBD3
ACVR1
SLC35C1
HACD2
RDH11
IFIT1B
ACOX2
ZMPSTE24
SMCHD1
ALS2
PSMG2
CEP76
GSN
RAB14
SYTL2
IQCF1
MST1L
MME
PTP4A2
SI
JAK1
ABR
PPIL3
NIF3L1
WASHC3
IER3
KIF21B
SSUH2
FABP1
ARHGAP27
SORL1
CSNK1E
AGFG1
EGLN1
ZADH2
TRIB2
STMND1
ALG10
PES1
CEP126
ANGPTL5
TCN2
PDCD6IP
NEURL1B
LIPG
CYP2C18
BACE2
SNTB1
CCNJL
PAM
TTI2
LRRC10B
UBE2J1
PDE5A
TPGS1
LMO7
KLRC2
PADI3
ZSCAN9
EHD4
EPS8L3
BSPRY
CASD1
KRCC1
HRH1
GRK2
PPP3CA
POLR3D
KRTAP4-2
KRTAP4-1
FOXJ3
CDHR1
RNF217
SORBS1
SERPINB8
NR0B2
JUP
PDLIM5
ZFYVE21
XRCC3
C10orf99
GFOD2
FAM107B
ICA1
AATK
TNNI2
SYT8
SLC25A1
FAM3D
HMOX1
RHOBTB2
PRR15L
IL34
MGAT4A
PCK1
MBTPS2
TRIM55
TBL1X
JMJD1C
TFDP2
UCN3
PCNX4
ZNF721
PIGG
VOPP1
KIAA1549L
RETNLB
RBM15
CCDC13
SLC10A5
CD70
KRT18
FGFBP3
RGPD6
RGPD8
RGPD5
RTN4
FNBP4
TPCN1
KHDRBS3
SYMPK
FOXA3
ILVBL
CTSB
IGFL2
MALT1
PDHA1
MBOAT2
CERKL
PRSS23
CDCA7
PTPRO
CD300LF
C2orf88
KRT20
BCAP29
LNX1
KCNQ1
KIAA0319
CXCL11
RARG
NEK10
DSC2
STAMBPL1
RAD18
MTUS1
SSBP3
SLC5A1
LASP1
POLR2J3
TEP1
OR51E1
STK40
NSRP1
MYO7B
DAGLA
RNF39
RASGRP3
SCARB1
SECISBP2
FAM184A
SCT
CDHR5
ZHX3
OGFOD2
XDH
STX3
YAE1
ZNF484
YAP1
CALML4
PIH1D1
ALDH16A1
ANKRD17
TMIGD1
PLIN1
LACTBL1
TXNRD2
COMT
KCNE3
ISX
VANGL1
SLC25A45
FRMD8
RUBCNL
HOXA6
MEF2C
UBE3A
CCDC192
MAP2K4
KCTD17
ZNF226
MBIP
ARID5B
ZBTB7C
AGT
ANKRD22
FABP5
CAPN9
ETFB
CHKA
WWC3
OR10H1
MAP1LC3B
CYTH3
TPX2
SEMA4B
PHLPP1
SPATA2
ADGB
TJP2
UGT2B7
CAST
SELENOP
C1orf141
H4C3
H1-6
SLC26A2
CALR3
C19orf44
PKIB
PSMC2
DNAJC2
FLVCR2
PIF1
PGBD4
EMC7
CAPN15
PKM
NCOA7
IL10RB
EPB41L4B
SLC4A9
SPINK1
UEVLD
HAL
GOLGB1
HIKESHI
TMC5
LRRFIP1
PLAGL1
CCDC196
GADD45A
VWA5A
PRDM2
MYCBP2
FMO4
ZNF562
UBE2H
ING1
TRIB1
HHLA2
PPFIBP2
DGKD
TMEM207
SMAD3
GIPC1
ARHGAP45
YWHAZ
BRCA1
TDP2
ACOT13
GSKIP
ATG2B
SDF2L1
MAJIN
SMAGP
RETSAT
PRDM8
BCAR3
COX19
EIF2AK2
PPARGC1A
CYP3A5
CENPBD1
CLDN14
MTRNR2L8
RNF145
JMY
SLC22A2
SLC26A7
S1PR4
RAB37
SLC6A18
SCUBE2
SBSPON
H1-2
SUSD1
UBAP2L
C1orf43
PMVK
ARHGAP32
MTHFD1L
USF1
MYH13
CPA3
MTCL1
GTPBP4
NDE1
MARF1
FOXP1
TAPBPL
RPL38
BCL2L15
CPLX2
MMACHC
CCDC163
SMTN
NOTCH1
PLEKHS1
TMEM182
MFSD9
NRARP
ATP2C2
VPS37C
ESYT1
CGGBP1
C3orf38
GLRA2
MUC20
ATL2
MBD2
P3H4
ATP5MC2
SLC16A14
H2AJ
BFSP1
SAMD9
CORO1C
ARHGEF38
LPIN1
ANXA13
SLC46A3
KLHL29
EEF2K
OR2T11
BTNL8
CRYGS
WBP1
INO80B
TPM1
GPR35
RBM47
FNIP2
PIK3CA
AGR2
MUC13
GGT6
GCNT1
STX19
NOX3
DDAH1
ALDH1B1
PTPRH
TMEM60
PHTF2
OTUB2
EID2B
ZC3H10
RPL41
CDX2
SEPTIN9
TMEM221
EVI2B
ST3GAL4
TMEM177
KLHDC2
TMPRSS4
UTP3
LIPK
NEK7
CYTH1
HOPX
EAPP
ABCC3
CCL28
DAGLB
ZNF789
C4orf36
CLIC4
PEDS1-UBE2V1
PEDS1
NFIB
SPINT1
PIP4P1
NFYC
PRKAB2
CLCN3
POLDIP3
RAI14
CCDC114
SMCO2
PLCXD2
PRMT5
NCEH1
GSTA4
BCL9
CORO1A
TXN2
MSH5
CLIC1
EPB41L2
NOL12
KIAA0232
CBLC
SLC6A20
APP
RND3
OR3A2
BACH1
ARHGEF37
MRPS23
METRNL
CLIP2
SERPINA1
PRR25
IMP4
CCDC115
ATP13A4
GAS2L3
SF3B6
FAM228B
GLB1L2
TPM2
SHC4
RPAP1
RNF223
OSBPL2
N4BP2L2
FDX1
DUSP21
DOCK3
CNFN
ALAS1
GBA
CFL1
EFNA1
ACP3
MLEC
NR2F1
MRPL1
MICAL1
CFAP45
SIT1
LIPH
SPG7
LAMB1
BEST4
STPG1
NIPAL3
AHCYL2
GLI4
ABCC11
FOXN2
TMEM141
CACNB2
CCDC59
KLRC3
RAPGEF6
CCNI
WNK4
TLN2
CCDC183
CDX1
CNNM3
CEP120
SLC35B4
CNBP
MMP1
FBXO48
CLDN12
APLF
KDM6B
AKR1B10
TCTEX1D4
LAX1
BTBD19
PPP1R3D
FAM217B
CALB1
INSIG2
DLL3
EIF3E
ZNF587
ILF2
ANO1
SIDT1
RELL1
NAALADL2
WDR26
PLEKHB2
OR51T1
DDX47
CHST6
COX16
LDHAL6A
ZFP62
SMIM14
AMN1
ARF6
SZRD1
NR1I2
TSPAN14
ZW10
CBLB
NOP16
HIGD2A
GRAMD2A