ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX096354 | LS-180
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◣ SRX096354: LS-180

◢ CDX2: STRING

CCDC200
HOXB4
HOXB3
DUT
C20orf204
CXCL9
ART3
LRRC19
TFAP2A
NFKBIZ
HOXB8
WDR74
SLC30A10
HOXA3
HOXA5
CERK
AP1M1
C1orf100
FCAMR
CDK5RAP3
DESI2
HOXC5
INTS9
HMBOX1
KIAA1217
FHL2
TMEM107
FLNB
USH1C
OR9Q2
REG4
HNF4G
HOXA4
HOXC6
QSOX1
WDR77
ATP5PB
QSER1
IQGAP2
RHOH
FGFBP1
HOXC4
UGT1A1
AP2S1
PDE6A
VSX1
CDC14A
TBPL1
LGALS3
ZZEF1
CYB5D2
TSPAN3
HESX1
APPL1
LOC102723996
ICOSLG
CREB3L1
UGT2B10
SLC17A4
GUCY2C
MAVS
WASHC1
SPAM1
KIAA2012
SLC25A27
CYP39A1
SGCB
TRIM2
PRKCZ
SPRED2
NWD1
RPUSD4
FAM118B
WBP4
ELF1
MATR3
MGAM2
CDK11A
TMEM87B
KLHL30
CLRN3
SPATA46
C1orf226
RNASE6
ROCK2
CDK11B
NPIPB5
NPIPB4
NPIPB3
CDH17
ACAN
RAB6D
CELA3A
SEMA3C
PDE4D
LRRC66
MEP1A
C3orf85
ZBTB45
C3orf52
ZNF608
ZNRF3
KRT8
USP7
CYP3A4
TSPAN8
GEM
RAD54B
FSBP
CASP5
REG1B
TARDBP
GOLIM4
PIGR
MYO18B
SLC4A9
SLC6A7
ADGRF4
RGMB
ARHGAP17
TBL1X
ZNF563
TMEM54
NXPE2
RNF186
JAML
ABLIM1
MINDY3
NEBL
CEACAM16
CMTM1
DUS4L-BCAP29
DUS4L
COG5
TAPT1
YAP1
AKR1C3
IGFL4
UTS2R
NPIPB13
NPIPB12
NOS2
JMY
PRSS3
PLAAT2
RNF114
HHLA2
ARHGAP45
LRRC31
IL33
MBNL2
ZSWIM5
ANO4
GBF1
MCTS1
TMEM45B
HOXA9
HOXA7
FBXO31
LDLRAD4
MAP3K14
RNF145
CALB1
RAMP1
PHF19
CDX1
DNAJC25-GNG10
DNAJC25
SGK3
LENG9
PRSS41
GNA14
MADD
DSC2
HEPH
RGS2
HSP90B1
ADGB
ERLIN2
MAMDC2
ADD3
TPD52
RABEPK
TJP2
MAB21L4
BCL10
TES
KIF16B
ZCCHC14
UTP3
MLF1
GJB4
TMCO3
DCUN1D2
ACVR1B
TNFSF11
EIF4G3
TM4SF4
NSRP1
PRR5L
GALK1
CELA3B
SH3D19
NAPEPLD
EPRS1
SMG7
NPL
ENGASE
BTNL3
PIK3CA
NNAT
BLCAP
ZKSCAN1
PRDX6
MALRD1
SLC3A1
INAVA
PRDM4
CALML4
MS4A18
SIRT4
MIA3
SERPIND1
MUC20
PTPRF
LAMA3
PTPRR
ACOX2
PES1
TCN2
MED13
TAOK3
MTRNR2L2
MSH3
DHFR
KRT20
COX16
RTN4
GPRIN3
RP1L1
VOPP1
PDCD6IP
RBM25
GALNT1
LOC388282
KIFC3
CRYM
COX20
CYTIP
HPGD
LIMA1
DCP1A
C2orf88
SEC23A
VANGL1
PRR15L
SLC26A2
TBC1D30
PTPRB
SLC11A2
MEIS1
WASHC3
SLC25A45
FRMD8
HKDC1
GSN
RAB14
UCK1
CASP4
TDRD1
CCDC186
SLC12A7
CDCA7
CIDEC
MTCL1
H3C15
H3C14
H2AC19
H2AC18
KIF26B
CORO1A
GSDMB
USP54
C1QTNF1
RGPD6
RGPD8
RGPD5
SLC20A1
CGGBP1
C3orf38
CBLB
HNMT
LGALS4
GCNT4
MAPRE3
STARD3
PPP1R1B
TSHZ1
KLC1
FBXO32
RNF24
STYXL2
GPA33
TSPAN12
ZBTB7C
NGB
LRRC10B
GSG1
FNBP4
SYTL2
ZNF3
MMP10
EIF2AK2
SCAF11
KIAA1549L
ADGRE5
B4GALT6
CNBP
SH3TC2
ZNF282
ETFBKMT
APBB2
NEURL1B
FABP1
CDCA8
C1orf109
HEXIM2
TGFBR3
ST6GALNAC4
UGT1A8
MAP3K13
CFAP45
ETFB
C4orf36
RABGGTB
EBAG9
SIT1
MBP
SOCS6
PPIL3
NIF3L1
IQCF1
SRI
DEPP1
PIWIL1
ECT2
SERPINB1
CLOCK
LNX1
BARX2
ADGRG1
CTXN3
TM2D2
ADAM9
PPARG
PMEPA1
PTPN6
C12orf57
DLG1
TUBG2
ARHGAP39
WEE2
DENND11
UGT2B17
C19orf33
ATP2B4
SMC2
SLC12A2
UEVLD
NDE1
MARF1
TAF4
NSFL1C
MMP1
ANKRD40CL
ACSF2
TEP1
PPARGC1A
GGH
ABR
CRYBG1
NOS1AP
CBFA2T2
CLIC4
FBXO48
APLF
RASSF8
ZNF91
MYO7B
TDGF1
PYGB
LRRN3
PRKAB2
TM9SF3
PMVK
MUC13
SULT1C2
EIF3E
DIAPH3
ZMPSTE24
RUBCNL
WWC1
CTTNBP2NL
ELAPOR2
FRMD3
ARHGAP32
NOTCH1
RNF103
MTHFD1L
TNIK
TMEM205
RAB3D
MYH4
CCDC159
TRIB1
RAPGEF6
SGO2
CYTH1
NXPE1
CPLX2
PLA2G6
ARHGEF38
YWHAZ
PIF1
VWA2
HINT1
ABAT
ARHGAP27
CPSF4L
FERMT1
DUSP18
CXCL2
HACD2
PKP2
PRAG1
RGS8
HEPHL1
ATL2
CCNJL
CYP3A5
NEURL3
GGT6
LRRC61
MYRF
CACHD1
NCAPD2
MRPL51
TGIF1
SMCHD1
EPHX2
LPIN1
FAM114A1
TNFSF15
FOXN3
TXNRD1
PPP1R3A
KLF5
SUSD1
OR10H1
ANTXR2
ICA1
NUMA1
LRTOMT
AMACR
NR0B2
IRF2BP2
ANXA11
WWC3
RNF31
PSME2
EMC9
ZNF226
MTUS1
AGFG1
VPS52
RPS18
RUNDC1
PTGES3L-AARSD1
PTGES3L
FBN2
PPIL1
C6orf89
HOOK1
RASGRF2
HOXA6
SPO11
H4C12
KCNQ1
LRIG3
LASP1
FARSB
FAM135A
IBTK
CPS1
AHNAK2
USP6NL
TMEM170A
SHH
PLEKHG1
MBIP
SLC14A2
ARL14
UBE2J1
ASAP2
SPATA2
OIP5
NUSAP1
PHF8
ZNF484
BATF
PHKG2
LTB4R
LTB4R2
CIDEB
TTI2
FGF1
BTBD3
CXCL8
SDF4
B3GALT6
TCIM
TPM4
LRP1
FOXP1
GSKIP
ATG2B
PIK3R2
OR9Q1
SMIM14
TRMT112
PRDX5
KRT36
SLC7A6
MLPH
SORL1
EIF3F
MRO
GSDMA
HSD3B1
C6orf132
SOX30
C5orf52
ME3
SLC22A2
SMG1
TIPIN
CLGN
PHACTR4
SYF2
MTFP1
EPHA6
ARHGDIB
GDPD3
MBD2
DUSP6
UHRF1
ANXA10
ZNF552
BCAP29
CAMK2G
KLRC2
IL20RB
VWA3B
MACC1
IL34
FOXJ3
INSIG2
RPS6KA1
SH3BP4
MYADM
FAM13B
DNMBP
BAHCC1
PDE5A
PADI3
RFLNA
SMIM31
GADD45A
TNFRSF10A
FHL1
TMPRSS4
NPSR1
SVIL
NDUFV3
ANKRD27
XDH
YARS2
EBPL
N6AMT1
KPNA6
CRLF3
LOC102723360
SSBP3
VWA5A
RPL23
AGPAT3
E4F1
CCDC114
ZNF587
ME1
ARHGEF28
IFIT1B
FDPS
UBE2E1
SERP2
DEPDC7
HNF1A
SHROOM3
GALNT12
CEP126
ANGPTL5
SPINK1
TOE1
MUTYH
TPCN1
FUT4
SULT1A2
RFX3
RIC8B
TFPT
PRPF31
EHF
MELTF
CLCN3
MME
EGLN1
GNAL
CD44
CADPS
GFOD2
FAM53B
PPFIBP2
ALOXE3
ILF2
ARF6
PER2
HS3ST1
RBM47
IFRD1
TM7SF3
GRK2
TOM1L1
NUDT3
HNF4A
SFR1
NR6A1
NUAK2
RHOBTB2
NCOA4
STPG1
NIPAL3
PLEKHS1
SEPTIN9
REXO4
CALCA
ADAMTS13
ACCS
KRT6B
CDHR1
NFIX
PBOV1
POLG
OR52K1
TMEM141
KRCC1
KCNK1
EIF4EBP1
DNAJB3
A1CF
FAM107B
ZNF248
OR51E1
STK19
DXO
TMCC3
TEX9
RFX7
GNPDA1
ALDH3A1
ZFAND6
ANKRD28
GGT1
DDX41
CYP4X1
KLHL29
HOPX
AHCYL2
ABCC10
TMEM69
GPBP1L1
ETHE1
LEKR1
MBNL1
KIAA0319
DGKD
SARS1
KLHL41
SLC28A2
BCL2L14
CDC14B
CCDC59
PAM
SLC26A7
NINJ2
DENND1B
FAM214A
SYBU
MTRNR2L8
SYNE3
RAPGEFL1
GSPT1
KIAA1671
RIN2
DNPEP
VPS37D
SH3BGRL2
CSDE1
MED15
ETV6
ATF3
EIF3D
POLR2J3
LRRC4
CDX2
CLIP2
TMEM79
SMG5
ANO1
RASAL2
ADGRF2
ICE1
SP100
RIPPLY1
MAP1LC3B
C1orf141
TMEM87A
GANC
SLC10A7
DENR
ARPIN-AP3S2
ARPIN
ALG10
SCT
CDHR5
ZNF510
NAA60
FRA10AC1
ENKUR
FAM193B
PDXDC1
ERGIC1
KDSR
MAPRE2
KLHDC8A
PNLIPRP1
U2SURP
STX19
GALNT8
RDH11
SLC5A1
ABCB9
SPPL2B
LSM7
KRT39
H3C10
H2BC14
H2AC14
GTF2IRD1
FAR1
MSH5
CLIC1
TMEM94
CDKN2AIP
GDPD4
CEP120
PRELID2
ACY3
HES1
OSBPL1A
NOX3
ARID1A
TNFRSF1A
COX7A2L
CLIC5
TMED7-TICAM2
TMED7
RNF217
CAPN15
DDAH1
ZNF764
EPB41L2
LSAMP
KDM5C
MTIF3
FGD3
TTC5
SPOCK2
CSK
KHSRP
SLC38A1
PEDS1-UBE2V1
PEDS1
ZNF395
RABGEF1
ZNF281
TRIM27
SCRN1
PWP1
POGZ
UBR2
ZNF721
PIGG
DOCK6
MYL6B
DPEP1
CSGALNACT1
SCP2
LRP10
NFE2L2
FABP2
RTTN
TMC5
TMEM139
CASP2
NIBAN2
CEMIP
SF3B4
MTMR11
YAE1
TFDP2
CASD1
CBLIF
SI
RNF39
ATP5F1B
SH2D6
TMEM207
NFIB
ATP13A4
PTCD3
POLR1A
CASP8
AMOTL2
OAF
ZNF789
GALK2
COPS2
SATB2
ZNF761
FEZ2
BRCA1
HSBP1L1
AMN1
UGT1A10
LAMC2
TRIM15
TRIM10
TCF12
ABCB11
FANK1
DKK1
HRH1
CXCL11
TMEM125
KCTD3
RIMBP2
PIK3C2A
INTS4
TAPBPL
METRNL
HEXIM1
MRPL19
TMEM221
IGF2BP3
SZRD1
KDM4B
GRM4
GABARAPL1
SHF
ZSWIM3
ACOT8
ANXA2
ADGRL1
ZNF438
SEMA4B
ALDH1B1
ARID3B
WWP2
ZNF350
MYH14
MFSD12
MDM4
ALG14
SLC33A1
ARID5B
CSNK1E
CLSTN1
PPP1R37
PKM
GAS2L3
HMGCS1
TM4SF1
PTPN2
FAM234B
BCAS1
METTL15
KIF18A
GPATCH1
ZC3H15
ELP3
LIF
MAP3K4
F2RL1
C6orf136
PSMD3
TMEM171
RAB30
CHD2
RNF216
PRDM2
WEE1
SEC61A1
ECHDC1
CLU
CASZ1
KRT19
ZC3H10
RPL41
RETNLB
PHGR1
TMEM144
ZNF326
IP6K3
CRY1
ADM
GLRA2
CCAR2
NEK3
DLL3
RIPK4
ZBTB40
NT5C3A
IER3
PLA2G2A
B3GNT3
ACP3
ZNF106
SNAP23
ATG4C
PELATON
KRT14
GRAMD2B
NEK7
CAAP1
MRPS15
BATF2
KIF21B
STX3
GLI4
H3C8
H2BC10
PLA2R1
PAWR
ART1
ZNF366
ATP5MPL
SSUH2
SIDT1
KDELR2
GIMAP5
TDRD9
CLIP4
NRAS
TINAG
ZBTB38
TMEM247
CWF19L2
PTPRO
MTMR4
SYTL5
CASP7
TMEM259
CNN2
WSB2
TMBIM1
SYT12
PSMB6
PPM1L
PCDH15
JAGN1
GSTK1
APOL2
SULT2B1
ZNF384
CDH11
RELL1
RABGAP1L
KLRC1
KLK10
GLRX