ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026263 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◣ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
ZNF76
RBBP8NL
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
CHI3L1
C20orf204
KCNE3
NEK2
CYP2R1
HK1
COL23A1
HES1
CTSK
SALL4
RARB
TOMM40L
APOA2
KRT8
GFOD2
CD300LF
HOXB4
HOXB3
AKAP9
WDR74
NFAT5
HOXA3
SLCO2B1
RGPD2
ZNF341
SERINC3
MRPL44
CYTH3
MACC1
KRTAP3-1
STX16
ZNF503
ALG10B
ZNRF3
TSPAN3
RGPD1
CD244
CREB3L1
AP1M1
AJUBA
USH1C
MRPL21
IGHMBP2
SULT2B1
PMEPA1
ARHGEF12
MARCHF8
ZBTB45
CDK5RAP3
SLC12A3
CA4
ISX
LECT2
CDX1
STAT3
KMT2D
STAT1
ADARB1
OPRL1
LKAAEAR1
MEP1A
ID1
HKDC1
LRP2
LRIG3
TATDN3
NSL1
C1orf100
ANKRD40CL
S100A2
MALRD1
ALG10
PDZRN3
KDM2B
HOXC5
ATF3
CDR2
NAALAD2
STX18
MKRN2OS
MKRN2
CASC3
NDUFS7
WWC2
FRG2
ETFB
NUF2
B3GNT6
MOB4
TSPAN32
C11orf21
SPATS2L
LDHAL6A
NCOA5
C2orf88
ZFP62
DDX23
LGALS3
H4C12
HOXB5
ADNP
EPCAM
WWC1
UBB
NTF3
CDK5RAP1
OSBPL1A
H4C15
H4C14
DPP4
TUT1
PTPN6
C12orf57
BCL2L1
OR10AD1
TOP3B
LIFR
TFPT
PRPF31
INTS5
COL5A2
DDX59
ADAP1
SKIL
AMACR
GSTP1
CTSB
EIF3D
WASHC2A
MRPS31
KAT6A
CCDC90B
RNPEP
TOB1
VILL
TMEM230
ANKRD1
RAB3C
GSG1
MRPS23
SPATA2
OR9Q2
BCAS4
PRSS23
LAMB3
POLDIP3
USP54
SLC33A1
AP3S2
PERCC1
PRSS41
TACO1
CAPN2
USP30
SLC7A5
HSPB3
CFLAR
QSOX1
TMC7
NOTCH2
GSTO1
RHOH
LAPTM4B
YAP1
MTRNR2L1
GTPBP4
CALM2
TRIP4
ALKBH3
C4BPB
ATP5F1E
NXPH2
OSGIN1
GIP
SMG7
SNTB1
PHLDB2
SBK3
GTPBP6
FEM1A
ADAT1
GBA
PHF12
GARS1
BTNL8
ZNF226
SLC7A6
ZC3H6
VPS9D1
ENTPD4
SIX1
TBL1X
TYMSOS
TYMS
VTN
SARM1
GPBP1
NAGLU
INTS9
HMBOX1
NFE2L2
MTRNR2L8
ZC3H10
RPL41
CLTB
EPRS1
DCP1A
KPNB1
IKZF3
REG3A
OGT
ZBTB7B
TOB2
GTF2H2C
GTF2H2
CLDN9
INAVA
STK32C
LRRC27
P4HA1
LRP6
NDUFAF5
ESF1
SP2
SYNRG
DUX4
USPL1
HMGB1
INTS12
GSTCD
KANSL3
FER1L5
DPY19L4
CRBN
PHIP
TTI2
NNMT
ZC3H15
PDZK1
OTUD7B
ZKSCAN2
TMPRSS4
BBS1
TSSC4
GTF2H2C_2
ADPGK
FCRLA
MAZ
TSFM
ARHGAP45
DOCK6
SNX5
MGME1
NR0B2
FBXL17
TBX4
SELENOH
ASXL1
AFG1L
H4C11
UBE2Z
XPA
TM9SF4
MARCHF7
PCID2
CUL4A
CLNS1A
MIA3
NDUFV1
SLC19A3
CCDC88A
ANKFN1
IRF2BP1
MCM7
AP4M1
EIF4H
CIAO3
SP5
BANP
MPZL3
LRMDA
CCAR2
SMIM19
SLC20A2
CCNDBP1
HNF4A
PEX3
ADAT2
RAD51AP1
GZF1
C12orf4
PTEN
KLLN
JAML
GPATCH1
PDE6A
CKAP5
CYCS
GTF2IRD2
ZNF335
PLCB1
ACOX2
INTS4
SIRT1
OGA
RAB18
TMEM248
RPS16
FGD3
TSN
PMS1
ORMDL1
UBR2
TMEM60
PHTF2
IST1
MRPS33
BCAS1
PTPN4
CALM1
COX16
ZW10
KMT5B
ERMN
SELENOW
KRT18
C6orf226
BCAP29
SRSF6
GTF2IRD2B
CCDC200
CXCL9
ART3
DUT
CERK
HOXA5
TMEM107
HOXC6
HOXB8
TFAP2A
LRRC19
DESI2
NFKBIZ
SLC30A10
GUCY2C
FCAMR
FHL2
SLC6A7
MAMDC2
LOC102723996
ICOSLG
TRIM2
SPATA46
C1orf226
HNF4G
HOXC4
UGT1A1
TBPL1
WBP4
ELF1
PIGR
FBXO31
AP2S1
SPAM1
RAB6D
RNASE6
HOXA4
SPRED2
DEPP1
CDC14A
RGS2
SLC25A27
CYP39A1
FGFBP1
FLNB
KIAA2012
RGMB
MAP3K14
ZNF608
CEACAM16
RNF114
QSER1
CDH17
NOS2
KIAA1217
TSPAN8
GBF1
C3orf52
CLRN3
UGT2B10
SH3D19
RPUSD4
FAM118B
FGB
RAMP1
ZZEF1
CYB5D2
IQGAP2
VSX1
CELA3A
EIF4G3
DUS4L-BCAP29
DUS4L
COG5
GEM
HEPH
ARHGAP17
CASP4
WDR77
ATP5PB
ZNF3
RIN2
DUSP18
PTPRF
ABLIM1
SYBU
MEIS1
TES
SIRT4
TMCO3
DCUN1D2
SERPINB1
KIF16B
SLC17A4
MAVS
SLC20A1
SEMA3C
DNAJC25-GNG10
DNAJC25
ERLIN2
ROCK2
RBM25
GSN
ADGRE5
MYRF
PDE4D
ZNF563
MYO18B
ADD3
SCT
CDHR5
SEC23A
USP7
GCNT4
HESX1
APPL1
LAMA3
ST6GALNAC4
LRRC66
GSDMB
CDK11A
MCTS1
WASHC1
GGH
NXPE2
TM4SF4
REG4
PIK3C2A
MATR3
C3orf85
NWD1
MBNL2
RBM47
ADGRF4
CDK11B
KRTAP4-2
KRTAP4-1
HNMT
PRR15L
E4F1
NAPEPLD
CIDEC
TMEM54
REG1B
ABR
TMEM45B
SERPIND1
MIDEAS
ANKRD27
CASP5
SOX30
C5orf52
KLHL30
PPARG
TPD52
NNAT
BLCAP
TMEM87B
TMEM69
GPBP1L1
MAP1LC3B
RNF186
RNF145
AKR1C3
IL33
PAK1
LIMA1
IGFL4
SLC12A2
ENGASE
RGPD6
IGSF23
TDRD1
CCDC186
FABP1
SGK3
PRSS3
CALML4
MGAM2
ATP2B4
TARDBP
PRKCZ
TNFSF15
CXCL2
PRICKLE1
ACVR1B
RAB14
C19orf33
HACD2
ACAN
RFLNA
PHF19
NPIPB5
PLAAT2
HOXA9
HOXA7
ARHGDIB
TNFSF11
ARHGAP27
GOLIM4
NPIPB4
NPIPB3
ANO4
LOC388282
SGCB
KIFC3
MLF1
FAM107B
SF3B4
RNF43
MTMR11
CRYM
ARHGEF18
NXPE1
FOXN3
PPIL3
NIF3L1
LDLRAD4
RAD54B
LRRC59
KRT20
FSBP
COX20
PKP2
GRAMD2B
MICAL2
ME3
KRT19
CLIC5
ZCCHC14
PLEKHG1
JMY
IFRD1
FAM53B
SLC45A4
H3C15
H3C14
H2AC19
H2AC18
NSFL1C
IL34
SLC4A9
NT5DC4
LRRC31
CNNM3
NOSTRIN
PPP1R3D
FAM217B
ZMPSTE24
SLC3A1
PRAG1
MGAT4A
MTCL1
STX1A
CYTIP
SFR1
NPIPB13
NPIPB12
ZNF721
TCF20
PRDM4
PIGG
NGB
CPLX2
SLC12A7
LASP1
CLDN4
METTL15
KIF18A
TGIF1
PES1
TXNRD1
RGPD8
RGPD5
CLOCK
CELA3B
ZNF91
SCAF11
MMACHC
CCDC163
GGT1
PCK1
MLPH
CEP126
BTNL3
ANGPTL5
UTS2R
RNF24
TRIM15
TRIM10
TMEM141
IRF2BP2
CMTM1
CACNB2
CACHD1
ZNF248
TBC1D30
GNA14
FUT2
MINDY3
ZNF552
TAPT1
SORL1
HSP90B1
YWHAZ
FARSB
UTP3
TCN2
ACCS
NEBL
RABEPK
CRLF3
RTN4
HPGD
FBN2
LMO7
CDC14B
SMCHD1
CCDC59
AMOTL2
MS4A18
PI3
NSRP1
PPP1R3A
CCNJL
FURIN
ANXA11
UCK1
CLGN
LENG9
DNMBP
NR6A1
EPHX2
PRPF19
POLR2J3
SERP2
FGF1
WASHC3
FOXJ3
ZSWIM5
CRYBG1
B4GALT6
ZHX3
USP6NL
JMJD1C
MED13
GALK1
GALNT1
SPINK1
PLA2G6
CFL1
UEVLD
FNBP4
CAMK2G
ZNF501
RIC8B
TOE1
MUTYH
ETFBKMT
TCF12
PTPRB
PRKAB2
TPCN1
TRIB1
MADD
SLC22A2
LNX1
YAE1
KNL1
ZNF510
ZCCHC8
ZKSCAN1
LRRC4
GPR171
LGALS4
CTTNBP2NL
CHKA
PTPRR
EBAG9
CDCA8
C1orf109
CGGBP1
C3orf38
BARX2
PIK3AP1
LOC102723360
KLF5
NRAS
CDX2
BCL10
STARD3
PPP1R1B
LUC7L3
ETHE1
SMTN
RDH11
EIF3F
THAP1
TUBG2
TSHZ1
TAOK3
NAA60
BCL9
ADGRG1
NDE1
MARF1
SMC2
HMOX1
RP1L1
HHLA2
BAHCC1
NUAK2
KIF26B
PRR5L
FGG
WWC3
SRI
NHSL1
SRP9
PIF1
MARK2
IFIT1B
FAM135A
DSC2
OGFOD2
MYO7B
FOXP1
WEE2
DEPDC7
DENND11
GLRA2
CEP120
BATF
APBB2
NPAS4
TMEM205
RAB3D
MYH4
KLC1
CCDC159
UGT1A8
C1QTNF1
RASSF10
ELAPOR2
ARHGEF38
STYXL2
GPA33
TUBAL3
TPX2
RGS8
GOLPH3
ADGB
CFAP69
BRCA1
UBXN1
TJP2
SLC11A2
FNIP2
PPFIBP2
PPIL1
PDCD6IP
C6orf89
RHOBTB2
CGREF1
RNF31
PSME2
PREPL
KCTD5
EMC9
CAMKMT
CALB1
TM9SF3
TINAG
SH3TC2
PSMD3
OR9Q1
NOS1AP
MBIP
KHSRP
ZNF282
SMIM14
LPIN1
IBTK
TSPAN12
TDGF1
SUSD1
NPSR1
FBXO32
TAPBPL
SLC14A2
DNPEP
VOPP1
STK31
KAZN
CPS1
FRA10AC1
MMP10
MAPRE3
DKK3
ARL14
SYNE3
CTXN3
RAPGEFL1
MAB21L4
VIPAS39
MAP3K13
CBFA2T2
AHSA1
UGT2B17
HAND1
TM2D2
ADAM9
SCNN1A
PIWIL1
LTBR
EHF
ZBTB38
SYTL2
UGT2B7
LIPK
HOOK1
FRMD3
MTUS1
HEXIM2
SDHAF3
PIK3CA
HEPHL1
PRDX6
OIP5
NUSAP1
ARID5B
SHF
LRRC10B
CDCA7
TEFM
PHACTR4
ARHGEF28
TMEM171
SGO2
RAB5B
MUC20
MELTF
AKTIP
VANGL1
ECT2
NEURL1B
ASB2
IGFL2
ELP3
SLC25A45
PYGB
NOX1
IQCF1
FRMD8
VWA2
URGCP
TFDP2
MYL6B
DAGLB
SMIM31
SLC26A2
METRNL
TDP2
FAM114A1
ACOT13
KBTBD8
TM7SF3
PIH1D1
KIAA1549L
CSNK1E
ALDH16A1
INSIG2
ENKUR
XDH
CYP3A4
C1orf105
TTLL6
TMEM170A
COG3
PHF8
OAF
HAL
ELF3
ZNF577
SNX17
RPS6KA1
EIF2B4
DDX41
CALR3
C19orf44
MRO
BCAR3
NCOA4
ZBTB7C
SDF4
PKIB
B3GALT6
ZNF512B
ZGPAT
SLC35B4
KHDRBS3
CLCN3
ARFRP1
STPG1
NIPAL3
HINT1
UBAP2L
MBTPS2
ETFA
COX19
C1orf43
AKR1E2
ZNF384
PLXNC1
AMHR2
ZNF789
SPOP
NR1D1
MRPS16
EMP1
CAST
TMEM89
SMG1
FABP2
CASD1
PHKG2
MST1L
GJB4
RTTN
FAM193B
VPS37D
RASGRF2
EIF2AK2
ARIH1
CORO1A
ANTXR2
ACSF2
HSBP1L1