ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

PRICKLE1
RAE1
MTRNR2L3
PYURF
PIGY
HERC3
GHRHR
PMF1-BGLAP
PMF1
ARHGEF7
MEIOSIN
FBXO46
NBPF6
ARID3B
SCGB3A1
APP
KDR
DUX4
TACC2
SLC45A4
ZBTB7B
LENEP
SLC2A10
PMM1
ATAD2
DNPEP
KANK1
SLA
ETV4
RTF1
TM2D2
ADAM9
ASIC2
CALML5
PIK3AP1
TENT2
OTULINL
PROP1
LECT2
PEX10
MTFP1
SGK1
LGALS8
NUDT3
NBPF4
TMEM216
NOS2
FRMPD1
SLC38A1
LAMA3
PTTG2
APBB2
CDH4
SLC22A10
ACMSD
GALNT18
NGB
GRM3
APOLD1
CXCL8
MCF2L
SBSPON
CDK14
TMEM40
JPH4
NPR2
RUVBL1
EEFSEC
TIPARP
C6orf58
TRIM52
C1QTNF3
PPARGC1A
ANGPT1
SLC1A2
IL24
C19orf12
MESP1
STEAP4
SGK3
HIGD1C
HERPUD2
ARSG
ACSL3
SLC16A6
BCL2L13
ATP6V1E1
LDB3
ELMO2
MRGPRD
ARNTL
IFRD1
LOC102724770
DGCR6
BEST3
SMYD1
KRCC1
MRPL24
HDGF
NWD1
IRX4
HIF3A
ZFAT
UGT2B10
KLF9
VEGFB
DNAJC4
SAXO2
EFL1
MAX
TRPT1
NUDT22
ULK4
TCAF2
MAMDC2
ERN1
SLC35F6
PARK7
CDCA7L
OXGR1
DAAM1
SCUBE3
KRT4
PCDH7
RFPL3
PDE9A
SKIDA1
ETV5
UNC45B
NLE1
ATOH8
ADAMTSL3
SRSF10
SASH1
AKR1B1
HAPLN2
TMEM14A
PROCR
NLRP5
GLYATL1
ZNF610
ANP32E
SUPT7L
SLC4A1AP
MX1
RTL1
RHOT2
JPH3
STC1
MDGA2
EPHA5
TMEM63A
LEFTY1
RAB37
SC5D
DHRS3
TNK2
PPP1R15B
EYA3
EXPH5
NFIC
AFTPH
RIMBP2
SCIMP
CDKN2AIP
MTRNR2L1
CREB3L2
ERCC1
MTCL1
RRBP1
AKAP12
BANF2
IER5
SMIM34A
ADRA2C
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
ATP6V1G1
FNIP2
ITGB5
SLC16A8
TUBA3D
DHX36
DUSP6
VSTM5
UNC13A
MKLN1
ZBTB18
CCDC9
PPDPFL
PRRT1
PPT2
COLCA2
ISX
IRS2
TMEM204
OR4F15
ANKRD40CL
DDX19B
AARS1
EAPP
ATXN2L
NBPF1
KMT5A
DIDO1
TMEM268
WDPCP
FHL2
IFT43
TGFB3
LGALS7B
FAM25A
SPIDR
SULT1C3
TIMP2
FAM234B
TMEM100
PXDN
CLDN8
FKBPL
ATF6B
MSX1
IL10RB
RBX1
CAPN5
STXBP6
ZNF511
TUBGCP2
CCKBR
CBX4
POLR2J3
WDR74
STX5
KCNQ3
NOVA2
ARHGAP22
PIGZ
NPTX2
FAF1
MAPK15
IQANK1
FAM83H
KLK3
KIF5C
DPP9
UGT2B28
ARHGEF38
DNAH12
BHLHE40
GABRA2
MBOAT2
LOC388282
TLK1
KRT3
ZNF771
LRRC69
RFNG
GPS1
DUS1L
TMCC2
COL28A1
TMEM62
MUSK
MAT2A
PTPRR
CYP3A43
TRMT12
RGL3
IRGM
TEPSIN
NDUFAF8
BDNF
SRP9
MMP28
ADAMTS8
FAM3C
FMN2
TMEM237
SLC29A2
PDXK
EIF4EBP1
RPH3AL
IGFBP1
SOX8
HDGFL2
MMP17
ZCCHC14
ST6GAL1
ANK3
MTRNR2L2
MSH3
DHFR
PALLD
PHLDB2
MAPKAPK3
CISH
OR13G1
RPS27A
CLHC1
TUBA3E
TRIM49D2
TRIM49D1
MKS1
FAM25G
FAM25C
BIRC5
TES
SH2D6
CAPG
SEC13
SAMD3
ETF1
TBC1D30
GNS
ZNF559-ZNF177
ZNF559
PDGFA
NUDT16
CHCHD5
TMEM262
DAB1
IL20RA
ITPRID1
TFCP2L1
SLC30A4
LSM11
DLX1
CCDC9B
DISP2
UGT2B11
PHGR1
SEPTIN9
IFNLR1
LINC01638
PPP1R14B
LOC114841035
FKBP2
ALDH3B2
HES6
PLPBP
ZNF331
SLC19A1
KCTD7
CBY3
TSPAN9
EFCAB12
MTMR9
TSPAN3
TPT1
CENPS-CORT
CENPS
PRDM1
LBHD2
HMGN4
SYK
ASPHD2
SBSN
GPX3
GAPDHS
CLIC6
TAOK3
CDC7
ZNF385B
DECR1
CLIP1
PFKFB3
SMIM13
MACROD1
EDEM1
DMRTA1
PHF19
MTRNR2L8
PRRC2B
FAM222B
LAPTM4B
UQCC2
SLC2A5
FBXL20
AFAP1
STK32A
FNDC10
TASOR
TTC3
PIGP
SIN3B
PTPRN2
NEBL
SCGN
TM7SF2
KSR1
ATXN7L2
NFIX
VAT1
RND2
ANPEP
MILR1
TPD52
SLAIN1
CMTR2
CDRT4
ST3GAL4
SENP1
PFKM
NFIB
NR2F6
OCEL1
STAU2
EHMT1
SEC14L1
ARRDC1
PARP11
CCM2L
ATF5
CREB3L1
SCAMP2
WIZ
DLG2
ACADL
LIX1L
CYB5B
MTFMT
POLR3GL
ANKRD34A
NUDT9
ZNF341
LOC100130520
CD300H
ZNF516
SNX16
RGS12
CDKN1A
TRMT11
CD93
ABCB5
TUT1
WASHC3
EDN3
KLF13
C3orf14
TTLL12
CPLX1
NSMAF
HES2
C4orf51
KCNJ15
CCDC34
HIVEP1
TTC7A
PRR15L
PHACTR4
MCFD2
CYB5A
ATP5MC1
UBE2Z
SMYD3
PYCR2
PAX6
C1orf116
PRKCD
SYBU
SCIN
INPP5K
GNAL
TRAF3IP2
CCN5
USP44
NME4
IMPG2
DECR2
HMOX1
PRKAG2
MUC3A
WRNIP1
MYLK4
USP30
DPRX
PARP1
ADAMTS5
ZNF287
TSPYL4
PDK4
LMOD3
KRTAP19-7
DSE
AGPS
CACNA1D
LDLRAD4
TMPRSS11F
SLC27A5
KIAA1522
SAMD12
SHF
PRELID2
C3orf20
HUS1
TRIQK
SPDEF
ESRP2
NIBAN2
HGD
HEG1
FAM25E
RNF186
UNC80
SHLD2
GLUD1
TMEM266
BRD2
ART1
MYH10
TFEB
SRRM4
DCAF6
HSPA4
ZNF813
PEBP1
MOCS1
PLIN1
PEX11A
ZNF589
CAMP
C1orf198
GSTP1
TLE1
RNF103
RGS7BP
MRPL44
SPHK2
DBP
WDFY1
MOGAT2
FECH
BCAT2
SOCS2
CYRIB
REG1A
ZNF547
TRAPPC2B
TBC1D14
MTNR1A
PRMT8
NEK10
KRTAP19-6
INIP
IL19
SLC26A3
VAMP2
PER1
UTRN
PRIM1
HSD17B6
RAB4A
NLRP8
ITGA8
DUOXA1
DUOX1
DESI2
COPRS
RGPD2
RGPD1
SLC50A1
EFNA1
HSPA12A
ENO4
DPM3
LAMP3
MNS1
HOXC6
HOXC5
FXYD2
FKBP5
DSCAML1
RSPH14
RAB36
LRRC30
CDK3
MRFAP1
LRIG1
PRDM14
GSPT1
THRSP
PSMB4
TAS2R42
NR2F2
CAP1
ANXA1
ADGRG7
EDARADD
PSCA
JRK
BLNK
AUTS2
SLC22A4
MTUS2
SNAI1
TMEM61
GPR153
ADRA1B
ZNF614
B4GALNT3
ABHD2
POLR2J2
CITED4
USP48
DAPL1
HPX
FCAR
VPS37C
DNAH5
G3BP2
CYP4F8
BCL6
RNF148
RNF133
BBS1
RERE
ANKRD28
SPATA6L
PLPP6
TBC1D3L
TBC1D3H
TBC1D3G
RUNDC1
PTGES3L-AARSD1
PTGES3L
RGMB
GDF15
PIH1D2
NKAPD1
RTN3
ATL3
CYREN
WTIP
RYR3
ECE1
TMEM42
TGM4
PPP2R2B
LEKR1
GPT2
THAP4
PAH
SPRY1
RPL22L1
RTN1
KATNBL1
SHH
PITPNA
EMC4
LRRC32
CD177
SOD3
TRIM68
SDHAF2
CPSF7
STX16
FAM107A
TNS3
FZD1
UBE4A
RASSF8
DCLK1
SORBS2
PSMD14
SYN3
MSMB
GLI2
RASAL2
PDE4D
PGAP6
KCNS3
BCL2L1
SPTBN1
RAB11FIP1
NR1I2
KLF15
TXNRD1
PUS3
HYLS1
CAMK1
KCNH2
GRHL2
XKR9
LACTB2
BAZ1B
FRG2
CLDN5
TAF12
RHOH
THSD4
WFDC12
REP15
NFKBIA
LYPLA2
MAL2
PITHD1
CAPN7
PAPSS1
TRMT61A
MTOR
CKB
CEBPD
AKAP7
TSC2
SLC9A3R2
NTHL1
DRG2
CYTH1
NFKBIL1
DDX39B
ATP6V1G2
HDAC4
TGIF1
FAM214A
PLAAT3
SIRT4
KCNIP1
NME1-NME2
NME1
CFAP74
SBF2
GATM
FAM174B
DNAAF2
BCAR3
FLOT2
DHRS13
ZG16B
TMEM217
TBC1D22B
GYS2
RNF138
FANK1
FAM110B
DNAH8
CRIM1
ADGRG6
ADAM2
COL23A1
PRR7
DBN1
KBTBD2
FURIN
MAD2L1BP
KLHL9
IFNA6
GTPBP2
CST2
TXK
GRAMD1A
TMEM87A
GANC
UTP20
SLC2A9
KNSTRN
CCDC86
ABCB11
CAMKK2
NAPA
GREB1
ST6GALNAC6
ST6GALNAC4
GPRC5A
SYVN1
SLC36A4
FAAH
MAPK10
OR1L1
FAM107B
TJP2
LOC105370980
DPYSL3
LRRC25
NRARP
GTF3C6
OR6V1
KRTAP9-9
KRTAP9-6
INPP5A
EEF2K
CDC42EP3
PMVK
STRN
SHROOM3
MCM7
MAP3K6
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
FCN3
EPB41L4B
CDHR3
AP4M1
MTHFR
CLCN6
BRD3
NAAA
ZNF541
MKRN1
CCL16
CCL14
C9orf152
FBXL5
TRIM33
SUGCT
MPLKIP
ZIC5
PANK1
FYB2
C1orf68
LNX1
EVL
PRKAR1B
HOXA3
GMNN
FOXQ1
HOXA4
SFTPC
PTPN13
KLK13
HOPX
BMP1
HERC5
SELENOS
USP36
JRKL
CCDC82
TSKU
TXNDC16
RHOU
MRPL21
KRT28
IGHMBP2
GPR137C
C2
RAD52
MMAA
EPHB3
SNAP91
SMOX
LY6H
KRT36
KRT35
CHMP4C
AMACR
CBR3
SLC13A1
NMT2
ANKRD35
RGS3
CORO2A
TMEM210
LRRC26
TAFA4
RPTN
PGLYRP1
LXN
RND3
KIF3B
IREB2
HPCAL4
GPR45
AK4
CPT1A
TBC1D9B
SCUBE2
PITPNM1
GSG1
FAAP24
CEP89
LFNG
NBR1
KRTAP22-2
IL15RA
FBRSL1
TNFSF15
SREBF1
LPCAT3
OTOL1
H4C3
H1-6
ODC1
MMP20
HS3ST4
ADAMTS3
TMEM45B
TMEM68
TGS1
ST3GAL6
FOXN4
VPS13A
NR2E1
NAA20
MMP15
DIO1
ACSS1
TBPL1
MTHFS
ITLN1
CPA6
S1PR1
ARHGAP40
MED30
RP1
NAT1
DNASE2B
RIN2
C11orf24
ZNF200
B3GNT6
SLC6A11
RDX
GOLPH3
TET3
CDC14B
PRXL2A
ITPR3
GPRIN2
MS4A7
OSBPL6
MRPL33
MPHOSPH10
MCEE
TAS2R60
GKN2
SLN
VPS13B
VPS26B
NCAPD3
ATL1
VEGFC
MAP4K5
KLHL35
ZNF527
WDR55
SLCO1A2
DND1
CGN
SMAD4
ZCRB1
PPHLN1
RAB11A
UCK2
SLC10A5
IMPA1
CLCA2
ARHGEF3
CPLANE1
AKNA
GPR65
TMCC3
RAPGEF5
ZNF579
SRGAP3
PACSIN1
NF1
AMHR2
ZNF619
OTOR
B3GAT1
SKIL
UBB
PGBD3
BTNL9
TMTC2
HEXIM1
FYN
CAPRIN2
ANO6
MRAP2
DPY19L4
RPS27
RAB13
GPR37
TAF8
RNF115
POLR3C
LRMDA
CCND3
UNC5A
TCHHL1
MLLT11
LOC100131107
CDC42SE1
C1orf56
RRP1
SEMA6D
PDZK1
CD160
ZNF563
MB
MYO7B
IWS1
ACER2