ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930121 | Acute myeloid leukemia
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◣ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

WASHC2C
HEXA
WASHC2A
AP5Z1
LAMP1
PRR5L
COMMD9
DUX4
GET4
SYT15
DMPK
DMWD
ASAP1
HIP1
SPDYE9
SPDYE8
SPDYE15
SPDYE13
SPDYE11
FIGNL2
LMO2
NCF1
CYTH3
RNASEH2C
KAT5
RAD9A
PPP1CA
STX1A
MMP9
ITGB2
EXT1
UBE2Q1
CHRNB2
ATP6V0D1
AGRP
DGKZ
ARHGEF12
RAMP2
EZH1
SUN1
KLF2
PDXK
CYB561
PRAM1
NLRP12
CD82
CCL4L2
RNF149
MTHFR
CLCN6
ZNF358
MCOLN1
LUZP1
CLCN7
METTL9
ARHGAP31
TPM4
BPI
BAX
PHACTR3
SLC37A3
ZNF595
TMEM104
NAT9
CD300A
RAPGEF1
KIAA0513
AOAH
HNRNPF
EGFLAM
MAMDC2
NFX1
LMBR1
TEAD3
RALGDS
RPS6KA1
STAB1
MXRA7
METTL23
NCR3
LTB
LST1
ARID3B
MTRNR2L1
MTRNR2L2
MSH3
DHFR
BHLHE40
PNMT
EN2
MTRNR2L8
ERCC1
PDGFB
PRICKLE1
ENTPD4
BRF1
PURB
SHLD2
GLUD1
RAE1
MTRNR2L3
MYCL
UBE3C
SLC4A2
CDK5
MYLK2
STAU2
FRG2C
MEF2C
TM2D2
ADAM9
SUSD4
ANKS6
SPTAN1
DENND2B
SH3GL1
CHAF1A
SUMO3
SPATA25
NEURL2
CTSA
DERL3
ADGRB3
FRG2
MIER1
DNAI4
TGFB2
GAMT
DAZAP1
ZSWIM1
TNC
PTBP1
SLK
PCIF1
KCNMA1
FGGY
SUMO2
SKIDA1
ALG6
PARD6B
HM13
SCAMP5
OTUD7A
VASH2
MRFAP1L1
BLOC1S4
ADAM23
PYURF
PIGY
HERC3
SMARCA4
ST7
ARHGAP32
PGAP3
FLYWCH1
MEOX1
TNNC2
SNX21
NEK6
COL23A1
PMF1-BGLAP
PMF1
HEYL
ACVR1B
SBK1
NSD1
CORO7-PAM16
CORO7
BTBD6
NPEPPS
ARID5B
FRMPD1
AP2A2
PTPN6
C12orf57
ATN1
CLSTN1
TFDP1
RABGAP1L
GRHL1
MACC1
TMCC3
SKIL
SLC45A4
STRA6
CBX7
SAP30
ZHX2
ARHGEF7
EFNA3
PRKCA
UBE2E2
SFXN1
PPCDC
KDELR1
GRIN2D
FASN
PPP5D1
NR5A2
CALM3
KDM7A
IGLL5
IRF2BP2
AFAP1
CHD7
PLEKHF2
MINDY2
FBXL3
PTP4A3
C17orf58
CHIC2
MEIOSIN
FBXO46
SYNGR3
NOXO1
GFER
CACNA2D2
CELA3B
PTCH1
PHF21A
ACTN4
ATF3
MRPL45
ZNF668
ZNF646
IFIT1
PATZ1
DYNLRB1
CFAP206
ANGPTL4
PPARGC1A
DIP2A
NGB
NDUFA4
IKZF2
SEPTIN9
DTNB
SLC2A10
ZBTB7B
SMYD1
LENEP
IGF1R
ARID3A
USF2
MKLN1
DNPEP
SLC1A7
KDR
CUTC
COX15
NFASC
DHRS3
SUMF1
PHIP
PRKCE
WBP1L
XRN1
ATXN7L3
CROCC
PEAK1
HMG20A
ARHGAP28
ADCY9
UBXN2A
TCAF2
MRFAP1
LASP1
AMOTL1
MSS51
SSUH2
FCHSD2
BMERB1
TGIF1
ADAMTS14
CABIN1
AUTS2
CDRT4
C1QTNF1
BCL2L13
RBPJ
ITM2C
LYPLA1
OAZ1
PTPRN2
TMEM266
TEX46
KDM1A
SLC25A11
RNF167
PFN1
GP1BA
UPF1
PEDS1-UBE2V1
PEDS1
SCGB3A1
TMEM40
MYEOV
PTPRG
ZBTB14
APP
SYNPO
CRIP2
RBM20
BSG
CTBP1
SCYL3
LCOR
AVEN
SSU72
PIPOX
ZNF217
TRIOBP
MELK
LYPLAL1
GAB2
CCDC88A
BMP7
CBX6
FBXL5
FHL2
PTBP3
MLLT10
PRRT2
MAZ
KSR1
CLN3
APOBR
RBFOX2
SRP9
ETV4
USP28
TRIL
EIF4H
NUDT3
IFT140
CRAMP1
PKNOX1
BCAR3
LCA5
PALLD
CLIP1
LIFR
AMMECR1
GNB1
FBXL22
PYCR1
MYADML2
SPRTN
EXOC8
PAPSS1
ARHGAP25
PVALEF
AATK
MAST2
RMI1
HNRNPK
SACS
SLC35A5
ATG3
STAT5B
RYK
TBL1X
KIF5C
TRMO
HMOX1
B3GALT5
SMURF1
ARPC2
GADD45A
ATOH7
LOC388282
FEZ1
NOS2
TMCC2
GHRHR
SLA
THEMIS2
LIMA1
RABEP1
P4HB
ATG9A
ANKZF1
APBB2
RALGPS2
NF2
HHAT
TMEM91
B9D2
ZBTB18
PRMT3
PRR7
C3orf70
PHC2
SNX19
ARRDC3
MDM2
BTBD3
LOC102724770
KRT86
DGCR6
ASIC2
OGFR
FHL1
DAG1
COL1A1
NTRK1
INSRR
GBA
ZNF205
SLC6A6
PAGR1
FRG2B
TCTA
RHOA
EAPP
BCL3
RINL
UBAP2L
C1orf43
EXOC6
SNX12
LAMA3
THAP1
NFIC
NAV1
KANK1
SIAH1
POLR2J3
KANK3
ARSG
RTF1
TMEM239
RBKS
C20orf141
BABAM2
DLGAP4
NAGPA
TSPAN7
SMARCB1
THAP12
NFIB
GVQW3
SLC8A3
RGS19
OPRL1
LKAAEAR1
LFNG
SRSF6
ZC3H7A
RGPD2
RGPD1
PPP2R3B
FZR1
DOHH
RIPOR3
E2F2
ZNF787
UBE2E3
HP1BP3
BCL2L1
TMEM39B
RMND1
PTPRF
ARMT1
YEATS2
KLHL41
UBXN4
RGMB
NSD2
PMM1
ACACA
APBB1
MAPK8IP1
LNX1
NCOA5
CDCA7L
SLC27A1
SGPL1
WWP1
VGLL4
TP53AIP1
ASF1B
RRAGC
MFSD2A
PXN
CPEB2
SUPT7L
SLC4A1AP
CELF2
MYOG
HIF3A
TAOK1
VOPP1
TMEM120B
CALML5
PSMA1
LGALS8
ABCA5
LARP1
TENT2
LGALSL
DUSP6
SYCP2
FAM217B
TMEM216
RBM14-RBM4
RBM14
MAP3K2
FREM1
SINHCAF
RIOK2
SRCIN1
SULF1
ROCK2
DOK7
CHMP1B
HERPUD2
GPAT4
DPH2
B4GALT2
ATP6V0B
CYP27C1
CHST12
B3GLCT
VAMP2
PER1
FZD3
FBXO16
PWP2
LOC102724159
GPSM1
GNA13
LRRC20
NEURL1
PPM1A
ATP6V0C
AMDHD2
BRD3
UBTF
FSCN2
HAGH
FAHD1
ZNF507
UXS1
PRRC2B
KLF16
MPP6
C1orf198
TBC1D5
HSP90AA1
SOX8
C15orf61
TP53BP2
PCBP4
GPR62
PTK2
MCM9
ATRN
RIPOR2
SPEN
VPS33A
DLL3
DENND1A
NUDT4B
C12orf66
C10orf95
SYNCRIP
MTMR3
LUC7L2
FMC1-LUC7L2
FMC1
CTNNA2
TCF7L2
PKMYT1
BTBD1
RNF152
IFNLR1
UPP1
OSTF1
NMRK1
NBPF6
TNK2
LIMK1
IQSEC1
HIF1A
SPCS3
PDIK1L
THUMPD2
THOP1
SSBP4
SGTA
RUFY1
PRKAG2
PPP1R14B
LOC114841035
GNB4
FKBP2
FAXDC2
SEMA3D
ACSS1
ASPH
MAP4K3
SEC22B
TADA2A
RXRA
CDON
DHX15
BMF
ZZZ3
FOXN3
TCHH
MB
IFI44L
GRAMD4
HES1
TRMT2A
RANBP1
ACSL3
TMCC1
RHEBL1
VSTM2L
ATXN7L2
USP2
STUM
LTBP4
ECE1
TNNT1
TNNI3
MYL5
LARP4B
ATP5ME
TNFSF15
FAM81A
APOE
APOC1
SCHIP1
CCIN
CPA5
PDS5B
PDE3B
ZAR1L
PPP4R2
BRCA2
NELFCD
BRD4
OR4D6
EPC1
DCK
SPNS1
LAT
TNRC6B
MAPT
SLC16A6
RGS3
ATAD2
RRP1
SPRED2
SHFL
PPAN-P2RY11
PPAN
ITPK1
CDH4
ANGPTL6
MESP1
MAP4K1
EIF3K
TBC1D30
IFNAR1
GNS
HNRNPU
GRM3
CYB5R1
CXCL8
ATXN2L
ADIPOR1
REST
CCDC34
EPHA2
MLLT6
CDKL5
FOXB2
FAM168B
FADD
CAPZA2
PPP2R5A
SUZ12
ASB2
CNOT8
MIDEAS
IL24
NAV2
DAB2IP
NEO1
MADD
BAIAP2
RAB6A
HNRNPH2
DBN1
TIMP2
ATP2B1
MYBPC2
LPIN2
ATP6V1G1
YTHDF2
CLDN5
STBD1
PRUNE2
IER5
SYNPO2L
MYOZ1
PAIP2
KRCC1
CHD1
LRIG3
SPAST
MYO1D
ECT2L
PXT1
KCTD20
DTNA
COMMD3-BMI1
COMMD3
BMI1
PRKAG3
BAHCC1
SPAAR
HRCT1
SRSF4
FSCN1
SFR1
CA11
TARBP1
RUVBL1
POLE4
EZR
EEFSEC
CRTC1
SLC22A10
SGK3
PXDN
SCAMP4
ADAT3
C2
TACC1
SLX4
NOTCH2
PTAR1
NFRKB
DISC1
FAM189A1
PACS2
WBP2
TMEM262
IKBIP
APOC3
APOA1
APAF1
XRCC5
C9orf40
ACTC1
JUP
SPATS2
LRRC47
DAAM1
QRICH1
SSH1
RNF170
KIF1C
INCA1
HOOK3
CAMTA2
BCAT1
NNAT
BLCAP
PCID2
GPR61
CUL4A
WDR45B
PPP6R2
GTF2I
TRIM16L
MCF2L
GGA2
JMJD1C
ZDHHC5
SGK1
CLP1
ADGRF1
ZNF236
FGF6
DGLUCY
MPP5
KDM2A
LCORL
ARHGEF2
MUSK
DUSP14
ABHD2
SPON2
PURA
ASXL2
SLC35F6
PTTG2
EBAG9
DAPK1
ADARB1
CHEK1
OPN3
CHML
CBLN1
APOLD1
VEGFB
RPL24
DNAJC4
ANKRD29
INO80C
THEM4
RARG
NPAS4
CRYGN
ANKRD26
PHLDB2
CSNK2A3
DIPK2A
ITSN2
SYNJ2
LRIG1
NAPEPLD
EXOC7
SF3B1
LHFPL1
NDUFV2
MATR3
CNP
TMEM250
RDH5
KLHL32
KANSL3
ITGA7
FER1L5
BLOC1S1
SLC12A3
ETV5
CCN2
TSPAN31
MTCL1
MARCHF9
KLF13
CDK4
ABCC10
MILR1
GFRA1
GPATCH8
LIX1L
ANP32E
TMEM167B
PTPN12
LMNB1
IFT43
EFNA4
KLHL8
IFNAR2
SRSF11
LRRC40
DRAM2
CEPT1
SPDYE16
MFSD1
CD44
RARA
LTBP1
MUC3A
WDR74
STX5
CREB5
SPINT2
MEIS2
EVPL
NES
ARID5A
NKIRAS1
ABLIM1
SRSF10
RNF187
CELA2A
MEF2D
TNNI1
STRN4
HHIPL2
FKRP
SNORC
EPC2
SH3PXD2A
HNRNPD
POLA2
CEP162
CARD10
ATP6V1E1
PPL
HERC5
LSMEM1
GSTP1
SLURP1
WRNIP1
MYLK4
PEX10
MYOD1
HIGD1C
RIN2
NR3C2
CYB561D1
UBE2Q2
LMCD1
HMGCS2
FLOT2
DHRS13
CCDC171
BTBD9
PRKAB2
MXI1
CHD1L
NEDD4
FKBP1A
CDC73
ACOT9
STX16
PTMA
DBNL
BEST3
SREK1
SOBP
CD47
TIPARP
ZNF318
MLH3
CELA3A
RFTN1
MRPL24
HDGF
ZBTB12
EHMT2
DNAJC5
SYT8
RGS20
KIAA1522
ATP6V1H
ZSWIM5
RHOT2
PTPRD
CDC42EP3
KLHL30
HPS6
ARMH3
OPRD1
NBPF1
SLN
SERINC2
RBM38
NNMT
ADAM12
ABCC3
SPG21
RERE
HNRNPA2B1
CBX3
SLC19A3
PPP1R3D
PLXNB2
SBSPON
ST8SIA1
SMARCD2
SAXO2
NAA38
EFL1
CNN3
CHD3
TES
TBC1D14
NBPF4
MX1
LRFN4
COL16A1
RYR1
RNF44
RASGRP4
MRPS7
MIF4GD
KRTAP2-4
GGA3
CDHR2
SSBP1
BRD2
TAF12
PROX1
KRT4
ANKRD1
SBK3
SBK2
PDZRN3
TBC1D2