ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017705 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◣ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

SOX2
RAB5C
VWA1
ATAD3C
SCGN
PROK1
MBNL3
OTX1
TMSB4Y
C16orf46
PRRG3
ARHGAP6
GDF5
CORO2B
WWTR1
MTRNR2L1
MCC
BTBD1
TRIM16L
FOXO3B
TPM3
SH3KBP1
CNOT6
PRPF4
CDC26
CCNL1
PLA2G4A
TMEM216
CRYZL2P-SEC16B
ZNF692
SLC25A23
CRB3
RAPGEF4
TAX1BP1
SPATA3
NPAS1
ABRAXAS1
R3HDM4
KISS1R
RBM38
CLDN3
ATG5
ROBO2
HEXB
FAM178B
CELA2A
HIPK3
SLBP
CDC42
SLC22A16
PSMB2
NAB1
MEIS2
MIB1
C1orf127
PPFIBP2
ZNF302
C1orf198
KLF2
PIK3R4
GPD1L
PPP1R2B
MED13L
ERCC6L
CYP27A1
AMBRA1
FAM189A1
RALA
LDB1
KYNU
BMPR1B
IFNA1
DLX4
CYP27C1
SMTNL2
PPM1A
LOC102724770
DGCR6
SEC24B
REG3A
NLRP2B
LRRC7
NSFL1C
CDC42EP1
KRTAP29-1
KRTAP17-1
KRTAP16-1
MYO9B
HAUS8
DIAPH1
NAAA
KLK5
PHF20
EIF3D
NPIPB5
NPIPB4
NPIPB3
LIPN
SKIDA1
VGLL3
MRPS23
GGA1
DHX8
SLC6A16
LRRIQ4
COL26A1
TBL1X
NGF
EMP3
CCDC114
CALM1
BCL3
GMFB
ARHGAP39
HMGCS2
SPATA31D3
NLRP2
TECR
DNAJB1
SYTL2
DNAJC22
C1QL4
ARID1A
PRRT2
MAZ
USPL1
HMGB1
KMT2E
AFAP1
SYTL3
DYNLT1
DUX4
POR
SLC6A11
GBA
SSNA1
ANAPC2
SDCCAG8
CEP170
TCTE3
ERMARD
SEPTIN9
CD69
GET4
TRIP4
PCLAF
SCML1
MORC3
LY9
CCAR2
C8orf58
GET3
SRRM1
RIC8A
BET1L
BNIP1
VTA1
NMBR
MAD1L1
MTRNR2L8
BAZ2A
EMC8
COX4I1
CHIC2
ARL4A
RPS11
PTDSS2
ANO9
PMF1-BGLAP
PMF1
UNC45B
NLE1
PHF2
ATP6V0D1
AGRP
TPK1
C16orf54
CCNT1
POLRMT
FGF22
STAT3
SURF6
DPP9
SNUPN
PA2G4
SPHK2
RPL18
FAM83E
TMEM238
TMEM190
RPL28
NUF2
ARF4
SIGIRR
USP36
TMEM250
COPS4
ANGEL1
GOLGA7
ADCK5
GTF2B
SARAF
RPL10A
CAB39
JUNB
GABPA
ATP5PF
HOOK2
SLC35E1
KIFC1
CLN5
TSN
ATXN1L
YPEL5
SNAP29
PI4KA
SCAF11
TMEM262
ARID3B
HEXA
WASHC2A
MTRNR2L2
MSH3
DHFR
BHLHE40
PNMT
EN2
ERCC1
LAMP1
WASHC2C
AP5Z1
PDGFB
PRICKLE1
ENTPD4
BRF1
PURB
SHLD2
GLUD1
RAE1
MTRNR2L3
RALGDS
MYCL
UBE3C
SLC4A2
CDK5
MYLK2
STAU2
FRG2C
MEF2C
TM2D2
ADAM9
SUSD4
ANKS6
SPTAN1
DENND2B
SH3GL1
CHAF1A
SUMO3
SPATA25
NEURL2
CTSA
DERL3
ADGRB3
FRG2
MIER1
DNAI4
TGFB2
GAMT
DAZAP1
ZSWIM1
TNC
PTBP1
SLK
PCIF1
KCNMA1
FGGY
SUMO2
ALG6
PARD6B
HM13
SCAMP5
OTUD7A
VASH2
MRFAP1L1
BLOC1S4
ADAM23
PYURF
PIGY
HERC3
SMARCA4
ST7
CLCN7
ARHGAP32
PGAP3
FLYWCH1
MEOX1
TNNC2
SNX21
NEK6
COL23A1
HEYL
ACVR1B
SBK1
NSD1
RNASEH2C
KAT5
CORO7-PAM16
CORO7
BTBD6
NPEPPS
PRR5L
COMMD9
ARID5B
FRMPD1
AP2A2
PTPN6
C12orf57
ATN1
CLSTN1
TFDP1
RABGAP1L
GRHL1
MACC1
TMCC3
SKIL
SLC45A4
STRA6
CBX7
SAP30
ZHX2
ARHGEF7
EFNA3
PRKCA
UBE2E2
SFXN1
PPCDC
KDELR1
GRIN2D
FASN
PPP5D1
NR5A2
CALM3
KDM7A
IGLL5
IRF2BP2
CHD7
PLEKHF2
MINDY2
FBXL3
PTP4A3
C17orf58
MEIOSIN
FBXO46
SYNGR3
NOXO1
GFER
CACNA2D2
CELA3B
PTCH1
PHF21A
ACTN4
ATF3
MRPL45
ZNF668
ZNF646
IFIT1
PATZ1
DYNLRB1
CFAP206
ANGPTL4
PPARGC1A
DIP2A
NGB
NDUFA4
IKZF2
DTNB
SLC2A10
ZBTB7B
SMYD1
LENEP
IGF1R
ARID3A
USF2
MKLN1
DNPEP
SLC1A7
KDR
CUTC
COX15
NFASC
DHRS3
SUMF1
PHIP
PRKCE
WBP1L
XRN1
ATXN7L3
CROCC
PEAK1
HMG20A
ARHGAP28
ADCY9
UBXN2A
TCAF2
MRFAP1
LASP1
AMOTL1
MSS51
SSUH2
FCHSD2
BMERB1
TGIF1
ADAMTS14
MAMDC2
CABIN1
AUTS2
CDRT4
C1QTNF1
BCL2L13
RBPJ
ITM2C
LYPLA1
OAZ1
PTPRN2
TMEM266
TEX46
KDM1A
SLC25A11
RNF167
PFN1
GP1BA
UPF1
PEDS1-UBE2V1
PEDS1
SCGB3A1
TMEM40
MYEOV
PTPRG
ZBTB14
APP
SYNPO
CRIP2
RBM20
BSG
CTBP1
SCYL3
LCOR
AVEN
SSU72
PIPOX
ZNF217
TRIOBP
MELK
LYPLAL1
GAB2
CCDC88A
BMP7
CBX6
FBXL5
FHL2
PTBP3
MLLT10
KSR1
CLN3
APOBR
RBFOX2
SRP9
ETV4
USP28
TRIL
EIF4H
NUDT3
IFT140
CRAMP1
PKNOX1
BCAR3
LCA5
PALLD
CLIP1
LIFR
AMMECR1
GNB1
FBXL22
PYCR1
MYADML2
SPRTN
EXOC8
PAPSS1
ARHGAP25
PVALEF
AATK
MAST2
RMI1
HNRNPK
SACS
SLC35A5
ATG3
STAT5B
RYK
KIF5C
TRMO
HMOX1
B3GALT5
SMURF1
ARPC2
GADD45A
ATOH7
LOC388282
FEZ1
NOS2
TMCC2
GHRHR
SLA
THEMIS2
LIMA1
RABEP1
P4HB
ATG9A
ANKZF1
APBB2
RALGPS2
NF2
HHAT
TMEM91
B9D2
ZBTB18
PRMT3
PRR7
C3orf70
CD82
PHC2
SNX19
ARRDC3
MDM2
BTBD3
KRT86
ASIC2
OGFR
FHL1
DAG1
COL1A1
NTRK1
INSRR
ZNF205
SLC6A6
PAGR1
FRG2B
TCTA
RHOA
EAPP
RINL
UBAP2L
C1orf43
EXOC6
SNX12
LAMA3
THAP1
NFIC
NAV1
KANK1
SIAH1
POLR2J3
KANK3
ARSG
RTF1
TMEM239
RBKS
C20orf141
BABAM2
DLGAP4
NAGPA
TSPAN7
SMARCB1
THAP12
NFIB
GVQW3
SLC8A3
RGS19
OPRL1
LKAAEAR1
LFNG
MTHFR
CLCN6
SRSF6
ZC3H7A
RGPD2
RGPD1
PPP2R3B
FZR1
DOHH
RIPOR3
E2F2
ZNF787
UBE2E3
HP1BP3
BCL2L1
TMEM39B
RMND1
PTPRF
ARMT1
YEATS2
KLHL41
UBXN4
RGMB
NSD2
PMM1
ACACA
APBB1
MAPK8IP1
LNX1
NCOA5
CDCA7L
SLC27A1
SGPL1
WWP1
VGLL4
TP53AIP1
ASF1B
RRAGC
ARHGAP31
MFSD2A
PXN
CPEB2
SUPT7L
SLC4A1AP
CELF2
MYOG
HIF3A
TAOK1
VOPP1
TMEM120B
CALML5
PSMA1
LGALS8
ABCA5
LARP1
TENT2
LGALSL
DUSP6
SYCP2
FAM217B
RBM14-RBM4
RBM14
MAP3K2
FREM1
SINHCAF
ZNF358
MCOLN1
RIOK2
SRCIN1
ARHGEF12
METTL9
SULF1
ROCK2
DOK7
CHMP1B
HERPUD2
GPAT4
DPH2
B4GALT2
ATP6V0B
CHST12
B3GLCT
VAMP2
PER1
FZD3
FBXO16
PWP2
LOC102724159
GPSM1
GNA13
LRRC20
NEURL1
BAX
ATP6V0C
AMDHD2
BRD3
UBTF
FSCN2
HAGH
FAHD1
ZNF507
UXS1
PRRC2B
KLF16
MPP6
TBC1D5
HSP90AA1
SOX8
C15orf61
TP53BP2
PCBP4
GPR62
PTK2
MCM9
ATRN
RIPOR2
UBE2Q1
CHRNB2
SPEN
VPS33A
DLL3
DENND1A
NUDT4B
C12orf66
C10orf95
SYNCRIP
MTMR3
LUC7L2
FMC1-LUC7L2
FMC1
CTNNA2
TCF7L2
PKMYT1
RNF152
IFNLR1
UPP1
OSTF1
NMRK1
NBPF6
TNK2
LIMK1
IQSEC1
HIF1A
SPCS3
PDIK1L
THUMPD2
THOP1
SSBP4
SGTA
RUFY1
PRKAG2
PPP1R14B
LOC114841035
GNB4
FKBP2
FAXDC2
SEMA3D
ACSS1
ASPH
MAP4K3
SEC22B
TADA2A
RXRA
CDON
DHX15
BMF
ZZZ3
FOXN3
TCHH
MB
IFI44L
GRAMD4
HES1
TRMT2A
RANBP1
ACSL3
TMCC1
DGKZ
RHEBL1
VSTM2L
ATXN7L2
USP2
STUM
LTBP4
ECE1
TNNT1
TNNI3
MYL5
LARP4B
ATP5ME
TNFSF15
FAM81A
APOE
APOC1
SCHIP1
CCIN
CPA5
PDS5B
PDE3B
ZAR1L
PPP4R2
BRCA2
NELFCD
BRD4
OR4D6
EPC1
DCK
SPNS1
LAT
TNRC6B
MAPT
SLC16A6
RGS3
ATAD2
RRP1
SPRED2
SHFL
PPAN-P2RY11
PPAN
ITPK1
CDH4
ANGPTL6
MESP1
MAP4K1
EIF3K
PDXK
TBC1D30
IFNAR1
GNS
HNRNPU
GRM3
CYB5R1
CXCL8
ATXN2L
ADIPOR1
REST
CCDC34
EPHA2
MLLT6
CDKL5
FOXB2
FAM168B
FADD
CAPZA2
PPP2R5A
SUZ12
ASB2
CNOT8
MIDEAS
IL24
NAV2
DAB2IP
NEO1
MADD
BAIAP2
RAB6A
HNRNPH2
DBN1
TIMP2
ATP2B1
MYBPC2
LPIN2
ATP6V1G1
YTHDF2
CLDN5
STBD1
PRUNE2
IER5
SYNPO2L
MYOZ1
PAIP2
KRCC1
CHD1
LRIG3
SPAST
MYO1D
ECT2L
MXRA7
PXT1
KCTD20
DTNA
COMMD3-BMI1
COMMD3
BMI1
PRKAG3
BAHCC1
SPAAR
HRCT1
SRSF4
FSCN1
SFR1
CA11
TARBP1
RUVBL1
POLE4
EZR
EEFSEC
CRTC1
SLC22A10
SGK3
PXDN
SCAMP4
ADAT3
C2
TACC1
SLX4
RAD9A
PPP1CA
NOTCH2
PTAR1
NFRKB
DISC1
PACS2
WBP2
IKBIP
APOC3
APOA1
APAF1
XRCC5
C9orf40
ACTC1
JUP
SPATS2
LRRC47
DAAM1
QRICH1
SSH1
RNF170
KIF1C
INCA1
HOOK3
CAMTA2
BCAT1
NNAT
BLCAP
PCID2
GPR61
CUL4A
WDR45B
PPP6R2
GTF2I
MCF2L
GGA2
JMJD1C
ZDHHC5
SGK1
CLP1
ADGRF1
ZNF236
FGF6
DGLUCY
MPP5
KDM2A
LCORL
ARHGEF2
MUSK
DUSP14
ABHD2
SPON2
PURA
ASXL2
SLC35F6
PTTG2
EBAG9
DAPK1
ADARB1
CHEK1
OPN3
CHML
CBLN1
APOLD1
VEGFB
RPL24
DNAJC4
ANKRD29
INO80C
THEM4
RARG
NPAS4
CRYGN
ANKRD26
PHLDB2
CSNK2A3
DIPK2A
ITSN2
SYNJ2
LRIG1
NAPEPLD
EXOC7
SF3B1
LHFPL1
NDUFV2
MATR3
CNP
RDH5
KLHL32
KANSL3
ITGA7
FER1L5
BLOC1S1
SLC12A3
ETV5
CCN2
TSPAN31
MTCL1
MARCHF9
KLF13
CDK4
ABCC10
MILR1
GFRA1
GPATCH8
LIX1L
ANP32E
TMEM167B
PTPN12
LMNB1
IFT43
EFNA4