ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
MSH3
DHFR
DUX4
ARID3B
EN2
HEXA
FRG2C
PNMT
MTRNR2L8
MYLK2
PURB
LAMP1
ENTPD4
WASHC2A
TGFB2
WASHC2C
FRG2
PDGFB
MTRNR2L1
AP5Z1
IFIT1
TMCC3
BRF1
BTBD6
MEOX1
DERL3
HEYL
ERCC1
TRIL
SPATA25
NEURL2
CTSA
ZSWIM1
TNC
ZHX2
ADAMTS14
CORO7-PAM16
CORO7
VASH2
TNNC2
SNX21
DOCK10
MSS51
ZNF668
ZNF646
CLCN7
ANGPTL4
WBP1L
CELA3B
ARID5B
MACC1
PIPOX
BHLHE40
RGMB
C1QTNF1
COL23A1
CRIP2
AFAP1
HMGCS2
CSNK2A3
KCNMA1
KLHL41
OR4D6
XRN1
SUMF1
TMEM91
B9D2
ZAR1L
BRCA2
THEMIS2
GPSM1
BCAR3
DYNLRB1
RBFOX2
PPCDC
STRA6
BMERB1
RNASEH2C
KAT5
TMEM239
C20orf141
RIPOR2
ARHGAP25
SYNPO
TRMO
FADD
STBD1
SLC1A7
RINL
IGLL5
DENND2B
LCA5
ITM2C
B3GLCT
PVALEF
AATK
ADGRF1
PTCH1
GADD45A
OR51T1
TLCD4
GFRA1
PRR5L
COMMD9
ATP6V0D1
AGRP
CLN3
APOBR
SLC35A5
ATG3
ABCC10
IFNLR1
TGIF1
CLDN5
RBPJ
FHL1
PYCR1
MYADML2
NAV2
FRG2B
STUM
LTBP1
SLC27A1
SULF1
FCRLA
BCAT1
NFIB
RHEBL1
PTPRD
SSU72
CDRT4
PALM2AKAP2
BCHE
TRIOBP
GBA
SLC8A3
CD82
TNNT1
TNNI3
PRL
FREM1
NTRK1
INSRR
FOXB2
MYPN
GET4
ATRN
MYEOV
EPHA2
SPG21
PROM1
COL1A1
SMYD1
CLIP1
IQSEC1
SACS
ARHGAP28
MFSD2A
MTUS2
CYB5R1
ADIPOR1
FSCN2
UXS1
FRMPD1
FHL2
SLC19A3
ECT2L
NAV1
MYOG
NOTCH2
EPB41L3
TP53AIP1
TMEM120B
GPR61
DOK7
NNAT
BLCAP
TNNI1
MUSTN1
ITIH4
NOTCH2NLA
PCBP4
GPR62
FLCN
EXOC7
ADAM12
CMTM2
HDAC9
TBL1X
PEDS1-UBE2V1
PEDS1
HAGH
FAHD1
ACSS1
RMI1
HNRNPK
ARHGEF2
SYT8
B3GALT5
SCHIP1
HMOX1
UPP1
PALLD
ZNF92
ARL14EP
LMCD1
RHOQ
ATP6V1E2
TMCC2
MYBPC2
VGLL4
ZNF507
TCAF2
E2F2
ITSN2
PLAGL1
ARHGAP31
ATP6V0C
AMDHD2
PRRC2B
SPAAR
HRCT1
DHRS3
HERPUD2
SLC12A3
TES
WSB2
TCF4
MFSD1
PAFAH2
KRT86
DTNA
TMEM205
RAB3D
CCDC159
HPCAL1
LGI2
PROX1
SH2D7
JUP
PDZRN3
UNKL
ASF1B
ASB2
NAGPA
RDH5
ITGA7
BLOC1S1
SELENOW
RFTN1
LIMK1
TBC1D2
C20orf204
DPYD
CDH7
SLN
RBM20
RRAGC
ANKRD1
SBK3
SBK2
RNF150
ARID3A
BCL3
RIOK2
MAP3K7CL
CHMP1B
SPNS1
LAT
HHIPL2
SMARCD2
SEMA5B
VPS33A
DAB2IP
RPL24
TSPAN12
RIPOR3
MYOD1
CELA2A
HNRNPLL
NDUFA4
CPA5
HNRNPH2
SPON2
TBC1D9
KDSR
KSR1
CCIN
OR6M1
WRNIP1
MYLK4
PTGIS
TMEM242
BAX
GGA2
SYN2
LRRC47
NUTM2F
RPS7
CREB5
IL32
TCF7L2
P2RY1
PHRF1
AKAP11
PRUNE2
BMP7
LRIG1
ITGB3BP
EFCAB7
LURAP1L
MYCN
RASGRP3
MYO18A
TNRC6B
TMEM259
CNN2
NES
ABLIM1
RYR1
RASGRP4
GIT2
ANKRD13A
SEC22B
TNFSF15
ENGASE
PCIF1
TBC1D5
C1QTNF2
ACTC1
ID3
SHB
AGTR2
PHC2
UBE2Q1
CHRNB2
NOTCH2NLB
ZNF285
NEK6
TMEM40
MLH3
SKP2
LMBRD2
CEP41
SYNPO2L
MYOZ1
FLRT3
CYP27C1
SPINT2
CELA3A
SOBP
KLF3
RMND1
ARMT1
MUC3A
APOE
APOC1
TRIM16L
HIF3A
KRTAP2-4
FAM200B
CCN2
TMEM167B
SLC44A1
ALK
HES1
USP2
PHLDB2
MAMDC2
KANK2
CELA2B
SVIL
UCHL5
RO60
EZR
KANSL3
FER1L5
NUP50
AMPD3
TP53INP2
INTS10
IGDCC4
OPRD1
UBL7
ATF3
CELF2
SSBP1
KDM3A
FAM193B
STX11
NUDT4B
IFNAR1
FGF6
LBH
GNAI1
S100A2
SLC38A8
OR14K1
OR14A2
DDX60L
SRP9
BAIAP2
WBP2
HRH1
BAHCC1
DAPK1
PPP6R1
NUTM2G
MYL5
ATP5ME
TSPAN31
MARCHF9
CDK4
ACOT9
RERE
SLC22A4
MYH7
NNMT
EYA1
DMD
MYL12A
DAG1
TMEM82
SLC25A34
NPEPL1
CRACR2A
SORCS1
ANKK1
MYCL
SH3PXD2A
SPATC1L
PTK6
SRP68
MXRA7
CNN3
ARMCX5-GPRASP2
ARMCX5
CRYGN
TNNT2
NAPA
VSTM2L
NAA38
CHD3
G2E3
ZBTB18
RAPGEF1
PLEC
FGF16
MRPL23
ACVR1
SYNJ2
LRFN4
VTA1
NMBR
SREBF1
GDNF
MCU
MAST4
ZNFX1
PKMYT1
CADM2
MYBPHL
RXRG
UBE2V1
CNBD2
SPATS2L
OCLN
MINDY2
JPH2
CKMT1B
NTSR1
WNT1
MSGN1
SEMA3D
PLXNB2
MAPK10
CHST12
INTS12
GSTCD
YARS1
S100PBP
SSUH2
ZNF358
MCOLN1
PRKAG3
SSTR5
ADCY7
KCTD14
RGS12
TP53BP1
PAG1
RALGDS
LNX1
PUSL1
ACAP3
TP53I3
SF3B6
FAM228B
SERINC2
BMP5
SYTL2
CPD
ATOH8
CGGBP1
C3orf38
RCN1
HS1BP3
LRRC17
TLN2
PAQR8
CASP3
NPAS4
USPL1
HMGB1
KANSL1
CHN1
SPRY1
SYNE3
TBX2
ZCCHC24
IRF2BPL
GSN
ERICH1
CDYL
SNRPB2
SLC38A10
COG2
ASB4
ATP6V1C1
IFT52
STYXL2
GPA33
CPA1
PLPPR1
CDH13
PLAU
SLC7A5
ZNF335
LSM12
G6PC3
ERI1
RPA3
LAMB1
TEX46
KDM1A
SUPT7L
SLC4A1AP
ARID5A
IZUMO2
INKA2
COL16A1
CCNG2
CHD2
NUDCD3
SOX8
SPRED2
BTG2
ENTPD2
LMF1
SLC1A5
AMOTL1
SYTL3
PPP1R3A
MCIDAS
CCNO
CT55
PPIP5K2
GIN1
CNTN6
CARD16
FOXN3
ABHD2
AADACL4
EXOC2
STK24
MGP
MTBP
MRPL13
SPATA13
ZBTB21
NFIC
TBC1D19
WSCD1
KLHL12
LIN7C
FSCN1
NOL4L
TRIP4
PCLAF
SERP1
EIF2A
SYCP2
FAM217B
IER5
IFNAR2
CARD10
PPP1R3D
TYMS
MED18
TLR9
DCBLD2
C1QTNF7
AVEN
ZNF280A
FAM184B
PBK
DICER1
AMZ1
RPS15A
ARL6IP1
C1orf226
ANXA6
BMF
COMMD4
RASL11B
ZNF555
GXYLT2
UTP3
MLLT6
MAMSTR
DZIP3
CIP2A
CR1L
SEM1
TMEM131
SOAT2
IGFBP6
ODF2L
RBM43
CA11
HOXC13
TACR3
SSBP2
TDRP
NFKBIZ
FLNC
C10orf67
LPCAT1
GCK
PTP4A1
TNPO3
CASD1
GNA12
EFNA5
ST7
RAD9A
PPP1CA
TANK
RNF183
MTHFD2L
ADGRF3
WRN
PURG
RGS19
OPRL1
LKAAEAR1
CEP162
EHD1
VPS11
AEBP2
SLF2
F7
TMBIM4
TUFT1
TM4SF4
MDM2
SPRY4
SIX1
COL4A2-AS2
NCAM1
VAMP8
VAMP5
HAAO
LYSMD2
CLMN
FRY
TMOD2
MAB21L3
FBXW4
TRIM62
CCNI
ST3GAL5
VWA3B
ASB18
FIP1L1
LTBP2
OBSL1
PROSER1
NHLRC3
ZNF622
RARA
RGS20
ATP6V1H
BCAM
CCDC174
BGN
COX7A2
PEX19
ARHGEF10L
NBL1
MOCS3
DPM1
RAP1B
ZNF512
PCBP2
JDP2
C2orf16
ZNF205
ARID2
MAP3K7
SYNGR3
NOXO1
GFER
ANKRD12
CAND1
NUP42
SCAF1
RRAS
ERCC2
PSMA5
THAP1
C1orf198
CDC42EP3
PIP4P1
OSGEP
APEX1
PNP
MTF2
PSEN2
RPUSD4
FAM118B
AZIN1
TBC1D13
IGSF10
SLC4A2
CDK5
ASIC3
MARCHF8
IFFO1
RRP15
ARFGAP1
TRMT5
SLC38A6
MME
CDH11
FAM151B
ZNF32
TPP1
TAF10
CHMP2B
BIN1
RBM48
PEX1
PHF23
GABARAP
DVL2
CCDC9B
PCNX1
GAS1
AFF1
MIDEAS
KLHL30
ABCC3
ARID1A
MAD2L2
DRAXIN
WNT10A
MAP1LC3C
TNNI2
WDR11
KREMEN1
HSPB2
CRYAB
C11orf52
EHD2
MB
POLR2E
GPX4
E2F6
GTF2B
CACYBP
GPR146
TEX36
PSME1
FITM1
SIGLEC11
ZADH2
TSHZ1
ITPK1
UVRAG
ZNF385A
MNAT1
SH3BP4
RRN3
EAPP
SMAD3
KIF17
SPATA9
RHOBTB3
RRAD
CIAO2B
CES2
CDH16
LRRC58
PPP4R3B
MATN1
VAMP2
PER1
MUSK
DARS1
AGAP2
PLEKHS1
NLRP6
CD44
NR2E3
GRN
PSAP
CDK5RAP2
DNTTIP2
DBF4B
STAT1
UQCRHL
MSL2
PPP3CA
UBB
SH2B1
CEP68
RBMS3
LIX1L
PIH1D2
NKAPD1
NPPC
ERFE
SF3A3
CHRNG
CTR9
SEPTIN9
SLC2A10
FLYWCH2
STARD3NL
TRMT10B
THAP10
LRRC49
LOC389831
ARMC8
RIMS4
CASQ2
WBP11
SLC17A4
MRAP
C12orf60
LOC102724770
DGCR6
FANCC
VGLL3
RAPGEF4
NFIA
RPL22L1
EGFR
AP3S2
KCTD9
CDCA2
ZNF593
FAM110D
C1orf232
SH2D3C
PEX3
ADAT2
CDK9
NAGLU
SIRT2
NFKBIB
THUMPD3
PPM1D
SPTAN1
LFNG
RGS3
PALD1
POLR2M
FAM120B
DLL1
DENND2A
RTKN
SLC12A7
C22orf31
LOXL1
DNASE1
MAP2K3
TTC30A
TUBA1B
LOC388282
ATP6V1G1
SETD5
GPR153
GGTA1
N4BP2L2
CCDC146
CCDC200
KCNF1
KRTAP5-3
KRTAP5-2
TMEM61
HUNK
PFDN4
MTMR9
PLAAT5
MYL12B
DAPK3
CAVIN4
MBNL2
EXOSC8
ALG5
WASHC5
NSMCE2
ANXA2
INMT
TPM2
WDR5
PNPT1
LOC100421372
HSPA14
ERBB4
CDNF
EVPL
MEF2D
TUBG1
RETREG3
CDC7
LOC112694756
ALDOA
IL26
PGF
KYAT1
POMZP3
ZNF212
TP53RK
SLC13A3
CCDC15
EFHC1
MPRIP
ERCC6L2
ABCA4
MATR3
HNRNPD
MRPL44
ESPNL
PLEKHD1
AP5S1
MYOF
CEP55
BCL2L13
TBC1D30
GNS
JMJD1C
ATP6V1E1
EPS8
TSR3
GNPTG
ST3GAL4
SELENOT
FREM2
KIF16B
RBBP5
ZNF143
THADA
ICA1L
PPL
VPS50
HEPACAM2
SLC22A8
ANKRD40
COX16
SPACA6
METTL15
KIF18A
GBX2
SGIP1
NKAP
NUP205
SLC35E2A
CEP63
ANAPC13
LSMEM1
PRDM12
NOTUM
HOXA3
DCLRE1B
AP4B1
STK36
RNF25
SLC25A26
HOXA4
ZNF644
STXBP5
SLAMF1
HOXA5
TMEM39B
ABAT
MRPS18A