ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX873813 | Keratinocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◣ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

RGPD2
RGPD1
MTRNR2L2
WDR74
MTRNR2L8
MTRNR2L9
MTRNR2L10
SLC35E2B
MVK
SLC35E2A
MTRNR2L6
PDE4A
SUDS3
ZNF300
MTRNR2L1
SNX16
CDON
HDAC2
USP17L8
RPL9
LIAS
RANBP2
BZW2
ANKMY2
TARDBP
ATXN2L
FAM71E1
EMC10
SP2
EFTUD2
CCDC103
RBM23
VPS37B
EED
FOXJ3
HOMER1
UQCRC2
PSMD1
FUS
FAM53C
CDC25C
COMMD1
CCT4
OPA3
HES4
STK19
DXO
WRAP53
UFSP2
YY1AP1
DAP3
PPP5D1
CALM3
RALGAPA1
OSGEP
APEX1
PAK1
TMEM259
TMEM260
RFX1
RBKS
BABAM2
DCTN1
ATP1B3
ZNF547
TRAPPC2B
OXSR1
PDXDC1
NUP205
RPL35A
IQCG
POLR3F
DZANK1
GNB2
FRAT1
C19orf48
PNO1
USP17L1
OGA
ANKRD13A
CENPN
GOSR2
TSPAN31
FLCN
NPAS4
PIK3R3
PSIP1
SMC2
EIF3B
STK38L
JOSD2
HADHB
HADHA
ZNF576
IRGQ
RHBDD3
EWSR1
ATP5MG
ZBTB21
HECA
ELL2
NVL
NOL8
CENPP
UROS
BCCIP
TCP11L2
TRMO
HINT3
PHRF1
TBCK
AIMP1
STX4
FEM1A
FAM227A
CBY1
TMUB2
IQCH
AAGAB
RPS23
ATP6AP1L
UPF2
CSNK2A1
ACBD4
UBB
TIMM22
TAF15
EIF4A3
NUP85
CACTIN
PAXBP1
PTDSS1
MTERF3
PFDN4
RPL21
STK35
SELENOW
CENPE
STAM
DHX8
GBA
GRIPAP1
C21orf91
PMVK
FOS
RPL19
PRMT1
DNMT1
TPBG
USP36
ING3
AKT1S1
TBC1D17
SUPV3L1
GARS1
UBE2B
CDKL3
NR6A1
IPO13
SLC35B1
RAB11B
BRAF
SRI
CDIPT
MTMR14
BCL6
TSNAX
PDAP1
BUD31
MRFAP1
NDUFA4
BCAS2
HGC6.3
ADCK5
BRD3OS
WFIKKN1
NCOA7
POLR3E
SSBP2
PGK1
ZHX3
GLIPR1L2
ZBTB37
OSGIN1
BAIAP2L1
GFI1B
HEXIM1
SACM1L
SPATC1L
BTBD2
ANO7
FBRS
GCNT3
BSPH1
PRMT5
H4C8
CXXC5
CCDC200
PBX2
SBNO1
STXBP1
HDDC2
CUL3
PBX1
SPOP
ULK1
SP4
TRAPPC9
LTA4H
ETS2
GSTA4
PXDN
B4GAT1
CAPN12
TIA1
IFI27L2
TRIM41
IQUB
C4orf19
USF3
CIB3
USP22
SPRING1
RNFT2
ZNF839
UBE2L5
PRELP
RNASE4
KASH5
ANG
ESRP1
POLG
LUC7L2
BCAR3
SCYL3
KCTD9
CDCA2
COTL1
JRK
DPP9
SETDB1
PSMB3
SMARCD3
EEF1A1
H3-3B
CDK18
METTL26
SLC29A4
LARP1
PPP6R3
CACNG6
TRIB1
SHF
SYNGAP1
MRC2
HSPA6
APOBR
NPRL3
ATXN7
ZNF512B
FBXO31
ARF3
MTRF1
SMG7
VLDLR
SIGIRR
MSRB2
C10orf67
FMC1-LUC7L2
FMC1
SUZ12
SPIRE2
RAB11A
APOA1
C17orf58
DSTN
BFSP1
PI16
PRR12
USP34
JARID2
TLCD1
SLC8A2
PHF21A
NDUFS7
BIRC7
MTMR4
LRRN3
TMEM65
ARFGEF2
CATSPERG
RASSF2
PPP1R21
ZNF524
FIZ1
SP3
CBLC
USP38
BCAS3
JPH4
INTS9
HMBOX1
TUBA1C
RPS29
C17orf64
KNL1
TLK1
SP1
RNF43
USP32
UBE3C
KCTD13
POLK
CERT1
MSI2
MEAK7
FOXJ2
LARGE1
NEMF
APPBP2
ACTR3
CLTC
CREM
ALKAL2
TFEB
MECOM
MYL12B
NAV1
CMBL
CAP2
OR1F1
ILF2
CACNA1S
RSF1
AAMDC
FOXA2
C16orf72
ITPR1
MYADM
NIM1K
C8orf37
NAP1L5
RPH3A
EFCAB2
CDC42EP5
CTCFL
CST3
KCNQ2
SMURF1
ZNF148
ARID2
AP1S3
OCLN
FBXL19
LHFPL2
IGLON5
GREB1
DDI2
CD164
MED6
SATB2
NPEPPS
PHF23
CPLX2
RCAN3
FOXK1
PCBP2
ADNP
RASSF5
NKX2-1
DYNLL2
OR10H5
POU2F1
PPP1R13L
POLR1G
IL26
PRDM11
TXNIP
MDM4
ZNF205
CNPY1
STX16
BRPF1
KLK7
KCNK15
GTF2H4
TAF6L
FBXO11
SERPINA3
PI4KB
LHX6
VNN2
BRD2
HMGN4
PPM1D
DHX34
BBX
ATXN1
CREBRF
SIGLEC15
CCDC107
ZFR
AHCYL2
SKA2
PRR11
HSD17B14
PLXDC2
LMNB1
PTPRH
MLLT10
ADAMTS9
VILL
PLCB1
LAMC1
TMEM170A
HERC4
DCT
CA11
BRIP1
RNF19A
AMZ2
SMG1
PABPC1
HMGB4
RALY
BCL2L2-PABPN1
BCL2L2
RNF139
KCNN4
HMGN1
KMT2E
LRATD2
CROCC
WDR26
MEF2C
TSC22D1
AAAS
ARC
GNG8
WBP1L
STAT6
LMBRD1
ERICH6
GTF2IRD1
DCUN1D2
SBK2
BMI1
LOXL3
DOK1
PPP2R5C
MRGPRE
RUNX1T1
BCAP31
ABCD1
PRPF40B
ORC4
MBD5
KLK6
SLC25A19
NCOA3
PKNOX1
CCK
HOXC11
GZMM
ZNF131
GRP
APCDD1
SEC13
ERF
NTNG1
IQSEC3
SOCS2
PHF2
ATP4A
MSRB3
MRPL38
LDB2
WBP4
S100A16
ELF1
MADD
PTGIS
DDX59
SCYL2
DEPDC4
PRAC2
PRAC1
DOK5
RIPOR3
RARG
TRA2A
KLHDC10
ATXN7L1
ZEB1
SHOX2
KIF6
TMC4
ROCK2
TMEM126A
GATAD2B
ZNF574
TMEM271
SLC6A1
NFAM1
KCNIP2
GNAS
TAF7L
SYNCRIP
PPP1R16A
COL20A1
PHF7
FKBP1A
BAP1
PRRC2B
ID2
RIMS2
OXR1
NPC2
ISCA2
CAMK2D
RNASEH2C
IRX6
TM4SF1
TMEM30A
RBM27
GDF6
ARRDC4
CAPN1
GABBR1
E2F3
ATF7-NPFF
ATF7
SEZ6L2
ASPHD1
UNC80
EFS
TLCD3B
LIN7A
UBTD2
SERPINI1
PDCD10
KSR2
CDKN3
TFAP2A
CWC25
TRAPPC2L
KCNB1
GALNS
DNAJC27
MTOR
SS18
KRT8
DPEP1
TCL1B
SDC2
LHX4
TASP1
GJA1
PRPF40A
ARL6IP6
GSC
ANP32B
CIART
AJM1
PTK6
NPIPB15
TNPO3
GET4
CFAP410
WNK1
SIPA1L1
IREB2
CYP4F11
COLEC11
C1orf21
AURKC
TMEM26
METTL25
CCDC59
NUDT16L1
DUSP4
ZNF384
HSPA1L
HSPA1A
EIF4ENIF1
CPNE6
RGS9
FADS2
FADS1
CXXC4
MARCHF6
PDE1B
PRAME
PAN3
DICER1
RAB6A
MAPKAPK5
ADRM1
RNF41
CTDSP1
PRSS22
MYOZ3
NUCKS1
GABPB2
EIF4B
RAP2C
HIF1A
RORC
RIN2
LRRC4B
DCAF5
ZNF462
STMN3
DGKH
ALMS1
BPTF
FIGNL2
FAM214A
DRAP1
C11orf68
ZNF768
TECPR1
JDP2
INPP5F
PPFIBP1
SH3KBP1
CDC25B
RSPH6A
PTGIR
IKZF2
CTBP2
PODNL1
DCAF15
KCNK3
TRIM56
POLR2H
CLCN2
SV2C
MAD1L1
TTC6
SRSF9
SMARCC2
FOXA1
DYNLL1
ACAP2
THRAP3
SKAP2
PCF11
BACE2
SCN1A
CACNB4
RC3H2
TPT1
EBNA1BP2
CFAP57
TMEM119
NRL
DCAF11
ARHGAP22
TNS1
FAM117A
NRCAM
UBR3
SEMA3F
RICTOR
CSNK1D
BCAS1
ATXN7L3
TPTE
STRN3
AP4S1
ADGRG1
SLC39A7
RXRB
NOTCH2NLC
AMHR2
SCLY
NOTCH2NLB
NOTCH2NLA
UBE2Z
R3HDM2
IQCE
ZMYM2
ZBTB20
NKX3-1
SKIL
PRAMEF8
PRAMEF7
CDV3
OMA1
KLHL22
DAB1
PGAM1
BCL9
MUC1
FAM168A
DUSP16
TMEM94
SNRNP200
ALPK1
TEDC1
MED25
CDC14B
CPLX1
BNIPL
HES3
ZBTB4
SELENBP1
POLR2A
TMEM245
GJA5
UBR5
PTPRCAP
HSP90AA1
FABP6
TRIM9
CREBBP
AADACL4
RAB11FIP2
ZFHX3
SH2D3C
USP35
TOP3A
SOCS5
SMCR8
KCTD21
ELF2
DCDC2C
UBE2D3
SIX4
BASP1
ASPHD2
ZNF71
CD63
NEDD4
LGI4
SCAF8
TSC1
SYTL2
ABI1
YWHAB
SH3PXD2B
ITGB2
PHF1
NOVA1
SPOPL
NACC1
FEZF1
ASTN1
ACOXL
ZNF628
UBE2R2
FBLIM1
RABGAP1L
PNPLA7
MRPL41
ARHGEF5
RAB5B
AMPH
ZSWIM6
TRIM46
SEPTIN2
PRKCI
NUP155
MAPRE3
KCNJ15
HDLBP
TC2N
PGR
ANKLE2
RPS19
KLF4
DNAH2
DENR
RASGRF1
DLX1
PRR5L
PLCXD1
NLGN2
GAB1
CBX8
MFN1
LYPD4
DMRTC2
ARHGEF35
AMOTL2
AP1S2
JPT1
FOSL2
EYA4
ZDHHC17
VIPR2
STAU2
SETD5
MED23
CST4
RIF1
HNRNPF
MBOAT7
XIAP
B3GALNT2
LRCH4
ILF3
FBXO24
CRHR1
MAPK3
CLDN12
SIX3
PLPP2
PIK3C2B
DTX1
C11orf86
PRDM12
USP25
TEX9
RFX7
NDRG2
ARHGEF40
PARD6B
MCTP1
CLIP3
TRIM33
SLC22A23
STX6
HOXA4
NUMB
CREBZF
APTX
PCK2
UTP18
MBTD1
LRP6
CEP170B
MARCHF10
LOC102723623
KCNV1
GOLGA6L22
GOLGA6L1
RUFY4
KAT6B
DYNC1LI2
PAFAH1B1
FNDC11
FAM72D
FAM72C
ACER3
HDGF
CSNK1G1
FBXO34
COBL
BCAM
NYNRIN
ZFHX2
NSUN4
NEGR1
MGAT1
ARID4A
SHISA7
TUT4
SPRY3
STXBP5L
DRP2
DLG4
ACADVL
SUMO1
MYBPH
C1RL
SYPL1
ALX4
WDR45B
RBMS2
RABEP1
MACIR
INTS3
HOXC13
EXOC3L4
BAZ2A
ZNF277
PTPRD
NLK
DOCK4
TRAPPC3
THUMPD2
MAP7D1
FBXL13
ARMC10
SLCO2A1
FAM83A
CDC42
PSMD6
PPFIA3
C19orf73
ADAP1
RNF214
PCSK7
NPTN
FAM110A
TCAIM
PHACTR3
PHACTR2
ITGAV
HBZ
STAU1
NOTCH2
HNRNPH2
GLA
CRYBG2
PLEKHA6
PTPN4
MOCS1
CST5
CAND2
FOXG1
NCCRP1
HOOK1
SKOR1
POLD4
NPAS2
HPSE
ARHGAP5
POTEM
POR
MYC
DEFB4A
NCDN
KIAA0319L
CDH18
UPK3B
UBE2E2
SEMA4D
HNRNPDL
CDK4
SPARC
LRCH1
CTNNA1
LYRM4
LHFPL3
HBA1
FARS2
TLE2