ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3075718 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◣ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

HGC6.3
ADCK5
BRD3OS
WFIKKN1
SSBP2
ZHX3
GLIPR1L2
ZBTB37
OSGIN1
BAIAP2L1
GFI1B
HEXIM1
BTBD2
ANO7
GCNT3
BSPH1
CXXC5
PBX2
SBNO1
STXBP1
HDDC2
FBRS
CUL3
PBX1
ULK1
SP4
TRAPPC9
ETS2
PXDN
CAPN12
IFI27L2
IQUB
C4orf19
USF3
CIB3
USP22
SPRING1
RNFT2
UBE2L5
PRELP
SPATC1L
KASH5
ESRP1
SPOP
SCYL3
KCTD9
CDCA2
COTL1
JRK
SETDB1
SMARCD3
H3-3B
CDK18
SLC29A4
LARP1
CACNG6
TRIB1
SYNGAP1
MRC2
APOBR
NPRL3
ATXN7
ZNF512B
ARF3
MTRF1
SMG7
VLDLR
SIGIRR
MSRB2
C10orf67
SUZ12
SPIRE2
C17orf58
DSTN
BFSP1
PI16
PRR12
USP34
TLCD1
SLC8A2
PHF21A
MTRNR2L8
BIRC7
MTMR4
LRRN3
TMEM65
ARFGEF2
CATSPERG
RASSF2
ZNF524
FIZ1
SP3
CBLC
USP38
BCAS3
JPH4
INTS9
HMBOX1
TUBA1C
C17orf64
TLK1
SP1
RNF43
USP32
UPF2
KCTD13
POLK
CERT1
MSI2
MEAK7
FOXJ2
LARGE1
APPBP2
ACTR3
CLTC
ALKAL2
TFEB
MECOM
NAV1
CMBL
CAP2
CACNA1S
RSF1
AAMDC
FOXA2
C16orf72
ITPR1
MYADM
NIM1K
NAP1L5
RPH3A
EFCAB2
CDC42EP5
CTCFL
CST3
KCNQ2
ZNF148
SNX16
AP1S3
OCLN
FBXL19
LHFPL2
IGLON5
GREB1
DDI2
MED6
SATB2
NPEPPS
PHF23
RCAN3
FOXK1
PCBP2
CCDC200
ADNP
RASSF5
NKX2-1
CREM
DYNLL2
OR10H5
POU2F1
MYL12B
IL26
PRDM11
TXNIP
MDM4
ZNF205
CNPY1
ARID2
KLK7
KCNK15
GTF2H4
TAF6L
FBXO11
SERPINA3
PI4KB
MTRNR2L2
LHX6
VNN2
BRD2
PPM1D
DHX34
BBX
ATXN1
CREBRF
SIGLEC15
ZFR
AHCYL2
SKA2
PRR11
HSD17B14
PLXDC2
LMNB1
PTPRH
ADAMTS9
VILL
PLCB1
LAMC1
TMEM170A
HERC4
CA11
BRIP1
AMZ2
SMG1
PABPC1
HMGB4
RALY
BCL2L2-PABPN1
BCL2L2
KCNN4
HMGN1
KMT2E
LRATD2
CROCC
STX16
WDR26
MEF2C
TSC22D1
AAAS
ARC
GNG8
WBP1L
STAT6
LMBRD1
ERICH6
GTF2IRD1
DCUN1D2
SBK2
BMI1
PPP1R21
PPP2R5C
MRGPRE
CPLX2
RUNX1T1
BCAP31
ABCD1
PRPF40B
ORC4
MBD5
UBE2B
CDKL3
KLK6
SLC25A19
NCOA3
CCK
HOXC11
GZMM
ZNF131
GRP
APCDD1
SEC13
ERF
NTNG1
SOCS2
PHF2
ATP4A
MSRB3
MRPL38
LDB2
S100A16
MADD
PTGIS
DDX59
SCYL2
DEPDC4
PRAC2
PRAC1
DOK5
RIPOR3
RNF19A
RARG
TRA2A
KLHDC10
ATXN7L1
ZEB1
SHOX2
KIF6
TMC4
ROCK2
TMEM126A
GATAD2B
ZNF574
TMEM271
SLC6A1
NFAM1
KCNIP2
GNAS
TAF7L
PPP1R16A
COL20A1
PHF7
BAP1
PRRC2B
ID2
PPP1R13L
POLR1G
RIMS2
NPC2
ISCA2
SP2
CAMK2D
RNASEH2C
IRX6
TM4SF1
TMEM30A
RBM27
GDF6
ARRDC4
BRPF1
CAPN1
GABBR1
E2F3
ATF7-NPFF
ATF7
SEZ6L2
ASPHD1
UNC80
EFS
TLCD3B
LIN7A
UBTD2
SERPINI1
PDCD10
RNF139
KSR2
CDKN3
TFAP2A
RNASE4
ANG
TRAPPC2L
KCNB1
GALNS
DNAJC27
MTOR
KRT8
DPEP1
TCL1B
SDC2
LHX4
TASP1
GJA1
PRPF40A
ARL6IP6
GSC
ANP32B
CIART
AJM1
PTK6
NPIPB15
TNPO3
CFAP410
WNK1
SIPA1L1
IREB2
COLEC11
C1orf21
AURKC
TMEM26
NUDT16L1
DUSP4
ZNF384
HSPA1L
HSPA1A
CPNE6
RGS9
FADS2
FADS1
CXXC4
MARCHF6
PDE1B
PRAME
PAN3
DICER1
ADRM1
RNF41
CTDSP1
PRSS22
MYOZ3
NUCKS1
GABPB2
EIF4B
RAP2C
HIF1A
RORC
RIN2
LRRC4B
DCAF5
ZNF462
STMN3
DGKH
ALMS1
PAK1
BPTF
FIGNL2
FAM214A
DRAP1
C11orf68
ZNF768
TECPR1
JDP2
INPP5F
PPFIBP1
SH3KBP1
CDC25B
RSPH6A
PTGIR
IKZF2
CTBP2
PODNL1
DCAF15
KCNK3
TRIM56
POLR2H
CLCN2
SV2C
MAD1L1
TTC6
SRSF9
FOXA1
DYNLL1
WDR74
ACAP2
JARID2
SKAP2
PCF11
BACE2
SCN1A
CACNB4
RC3H2
EBNA1BP2
CFAP57
TMEM119
NRL
DCAF11
TNS1
FAM117A
NRCAM
UBR3
SEMA3F
CSNK1D
BCAS1
ATXN7L3
TPTE
STRN3
AP4S1
ADGRG1
SLC39A7
RXRB
AMHR2
SCLY
UBE2Z
IQCE
ZMYM2
ZBTB20
NKX3-1
TRIM41
MLLT10
SKIL
PRAMEF8
PRAMEF7
CDV3
KLHL22
PGAM1
PDXDC1
BCL9
MUC1
FAM168A
DUSP16
TMEM94
SNRNP200
ALPK1
TEDC1
MED25
CPLX1
BNIPL
HES3
SELENBP1
TMEM245
GJA5
SMURF1
UBR5
PTPRCAP
FABP6
TRIM9
AADACL4
RAB11FIP2
ZFHX3
SH2D3C
SYNCRIP
USP35
TOP3A
SOCS5
SMCR8
KCTD21
ELF2
DCDC2C
UBE2D3
SIX4
BASP1
ASPHD2
ZNF71
CD63
NEDD4
LGI4
SCAF8
FOS
TSC1
SYTL2
ABI1
YWHAB
SH3PXD2B
ITGB2
PHF1
NOVA1
SPOPL
NACC1
FEZF1
ASTN1
ACOXL
UBE2R2
FBLIM1
RABGAP1L
PNPLA7
MRPL41
ARHGEF5
RAB5B
AMPH
ZSWIM6
TRIM46
SEPTIN2
NUP155
MAPRE3
KCNJ15
HDLBP
TC2N
PGR
RPS19
KLF4
DNAH2
RASGRF1
DLX1
PRR5L
PLCXD1
NLGN2
GAB1
CBX8
MFN1
LYPD4
DMRTC2
ARHGEF35
AMOTL2
AP1S2
JPT1
FOSL2
EYA4
ZDHHC17
IQSEC3
VIPR2
STAU2
CST4
RIF1
HNRNPF
MBOAT7
XIAP
B3GALNT2
LRCH4
ILF3
FBXO24
CRHR1
MAPK3
CLDN12
GET4
SIX3
PLPP2
PIK3C2B
DTX1
C11orf86
PRDM12
USP25
TEX9
RFX7
NDRG2
ARHGEF40
PARD6B
MCTP1
CLIP3
CD164
FKBP1A
SLC22A23
HOXA4
OR1F1
NR6A1
NUMB
CREBZF
PCK2
RICTOR
UTP18
MBTD1
LRP6
CEP170B
MARCHF10
LOC102723623
KCNV1
GOLGA6L22
GOLGA6L1
RUFY4
KAT6B
PAFAH1B1
FNDC11
FAM72D
FAM72C
ACER3
HDGF
CSNK1G1
COBL
BCAM
NYNRIN
ZFHX2
NEGR1
MGAT1
ARID4A
GARS1
SHISA7
TUT4
SPRY3
STXBP5L
DRP2
DLG4
ACADVL
STK35
SUMO1
MYBPH
C1RL
ALX4
RBMS2
MACIR
INTS3
HOXC13
EXOC3L4
BAZ2A
ZNF277
PTPRD
NLK
DOCK4
THUMPD2
FBXL13
ARMC10
SLCO2A1
FAM83A
PSMD6
PPFIA3
C19orf73
ADAP1
RNF214
PCSK7
NPTN
FAM110A
TCAIM
PHACTR3
PHACTR2
ITGAV
HBZ
STAU1
HNRNPH2
GLA
CRYBG2
PLEKHA6
PTPN4
MOCS1
CST5
CAND2
FOXG1
NCCRP1
HOOK1
SKOR1
POLD4
NPAS2
HPSE
ARHGAP5
OMA1
DAB1
POTEM
MYC
DEFB4A
NCDN
KIAA0319L
CDH18
UPK3B
UBE2E2
SEMA4D
HNRNPDL
CDK4
SPARC
LRCH1
CTNNA1
LHFPL3
HBA1
TLE2
POLR1D
LNX2
TRABD2B
SRGAP1
NR1D2
MFSD3
GNAQ
EIF5AL1
METTL25
CCDC59
GPR162
CNTNAP1
CCR10
VSTM2L
STAG2
ARHGAP21
PCDH20
FYN
CYP24A1
CAMK1D
CACNG4
C1orf159
SYNDIG1L
FUT1
FGF21
ZBTB4
POLR2A
CRIP2
AKAP13
SOX13
HEXB
PPP2R2A
RBM39
PDP1
ADIPOR1
HADHB
HADHA
RAB6A
ATG9B
ADAM10
MMD
BMT2
AZU1
ZBTB45
MINDY1
CIC
CARD11
WWP2
UBL4B
SHISA5
FHDC1
THAP12
KPNB1
GVQW3
FLT3LG
FCGRT
PRR7
PPM1H
FOXO3
TET2
PRPF3
MLF1
MAP2K2
C9orf152
ZIC4
RNF225
NME8
MAD2L1BP
HSPA2
HOXB7
GTPBP2
GLI3
STRADA
SMAD2
SAMD1
MINK1
KIAA2026
C6orf136
TPRX1
RNF224
PRKAR1A
PPP4R3B
KLK8
CLDN15
SPATA2L
SLC35C1
BRSK1
PTK7
POTEG
OC90
CHCHD3
TUFT1
SALL4
PRKCB
NTRK3
MRGBP
ZNF444
MARK2
GRB2
CDK17
ADSS1
UPK3BL1
STK38
PRPF38B
NKIRAS1
ARHGAP22
SURF2
SURF1
GLIS2
CALM1
R3HDM2
FBXO41
CRELD1
EPS8L1
ZNF641
DNMT3A
DOCK11
PRTFDC1
DLG3
RGPD2
RGPD1
MX1
SYN3
SCAI
PRKCA
NSD1
SEMA4G
OSBPL7
KCNH4
GAGE12H
GAGE12G
GAGE12F
GAGE12E
GAGE12D
GAGE12C
FAM180B
SYT1
PAPOLA
SLC16A6
RDH8
PRKRIP1
NMRK2
ARSG
AMMECR1L
HDGFL2
PKNOX1
SMIM5
MORF4L1
FLRT1
ZNF628
DNMT3B
ZNF575
B4GALT5
UBAP2L
SCN5A
HNRNPA3
C1orf43
SELENOW
PAPLN
CHST3
AGRN
RAI2
PDCD1
C9orf16
BCL9L
TUBG2
PPP2R5E
NAMPT
TDRD12
POTEF
PDE4A
UNC45A
TPR
SLC12A9
SETBP1
ODR4
NEXMIF
TSPYL2
STPG2
GLRX2
FIS1
CDH24
SLC25A6
RALBP1
ZNF687
TRIO
NRXN1
NOL4L
HIP1
GRAMD1A
ZNF423
TNFRSF1A
PDCL
TOX4
TIPARP
RPS6KA5
RAB2B
METTL27
EBI3
DGLUCY
NRP1
NAT16
FOXP4
SYTL1
RNFT1
RFX3
GFOD1
DDX3X
CPT1C
TPM2
SPATS2
PRKCH
NME1
GGPS1
ARID4B
NTS
KLF16
ARID1A
AKAP4
ZDHHC20
TRIM37
NPIPA1
SHD
ACHE
USP16
TMEM164
SCAF11
DACT1
WDR97
TMEM9
RTN1
RBPJ
NEO1
KIF26A
IGSF9
DNAJC13
CCDC74A
C14orf28
TPBGL
SPPL2A
LTBP1
STYX
RAB1A
PRSS33
PPP1R3B
PCDH7
LMBR1
LEPROT
LEPR
IRF2BPL
BRAF
SEL1L3
MED13L
LYPD5
LHX2
IL9
MB
LSM5
BICDL1
AVL9
SIN3A
PRR14
POC1B-GALNT4
POC1B
GALNT4
FGF17
MAP1S
INAFM1
CPEB2
CDYL2
ZNF827
KLK12
FAM122C
FAM122B
ARFGEF1
ZFP36L1
TTYH2
RHOH
FBXL4
PLCB3
HNRNPLL
GRTP1
SP7
RAB30
MEX3A
LMNA
EZH1
CLEC18C
ZNF503
NEUROD1
GPR107
ZBTB2
YWHAZ
POPDC2
LRRC37A3
DLGAP4
ANTKMT
AMZ1
ZIC2
SLC9A5
GPSM1
DCLK1
VAX2