ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1916935 | Epidermal stem cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◣ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

MTRNR2L2
MTRNR2L8
RGPD2
RGPD1
MTRNR2L9
NEMF
PGK1
B4GAT1
POLR3E
RPS29
NCOA7
WDR74
FBXO31
PRMT5
GSTA4
BCAR3
H4C8
SACM1L
NDUFS7
LUC7L2
FMC1-LUC7L2
FMC1
DPP9
POLG
HSPA6
SHF
TIA1
LTA4H
METTL26
PDE4A
ZNF839
PPP6R3
PSMB3
RAB11A
CYP4F11
C8orf37
ILF2
HMGN4
KNL1
SLC35E2A
SNX16
DCT
SLC35E2B
TRIM41
CCDC107
MVK
EEF1A1
APOA1
TMEM259
HES4
ATP1B3
CCDC200
BRAF
RNASE4
ANG
SMARCC2
HECA
WBP4
ELF1
PPEF1
FAM71E1
EMC10
RBKS
BABAM2
ZBTB21
VPS37B
OR1F1
MTRNR2L10
ELL2
HOMER1
RFX1
RPL9
LIAS
SLC27A4
RBM23
PAXBP1
NPAS4
GBA
UFSP2
OPA3
PAK1
LASP1
PARP2
RANBP2
FOXJ3
JOSD2
JUNB
EIF3B
USP17L8
OXR1
PSIP1
SRI
ALOXE3
TSPAN31
KRT6B
ELOVL5
RALGAPA1
HROB
KRT6C
STK38L
SIRT2
NFKBIB
H2BC10
CD24
MAPKAPK5
FBXO34
SETD5
NSUN4
SUGCT
MPLKIP
GARS1
GOSR2
DYNC1LI2
HDAC2
EGR1
USP36
JOSD1
ANKRD13A
LOXL3
DOK1
UROS
BCCIP
NOL8
CENPP
TARDBP
C12orf66
UBC
SLBP
POLR1H
KRT6A
ZBTB4
POLR2A
PDXDC1
CDC14B
LYRM4
FARS2
CSNK1G2
LRP2BP
ANKRD37
PRKCI
YTHDC2
HADHB
HADHA
STK35
TIGD5
EEF1D
H2BC11
H2AC11
RHBDD3
EWSR1
ATG101
NOTCH2NLC
ZNF300
NOTCH2
NOTCH2NLB
NOTCH2NLA
SS18
PIK3R3
FLCN
BCAS2
ANKLE2
UBE2I
SLPI
RBM42
JARID2
TMEM260
XPNPEP3
ST13
TMUB2
KRT17
ATP9B
TEAD1
SUDS3
PHRF1
XRCC6
DESI1
UBE3C
CD164
TIMM22
MAP1LC3A
DUSP1
BTBD9
OXSR1
NDUFB1
CPSF2
FABP5
COMMD1
CCT4
HSP90AA1
PSMG2
CEP76
KRT5
EED
CACTIN
FRAT1
LANCL2
SELENOK
ZNF35
WARS2
RPL21
NDRG1
LGALSL
EIF4ENIF1
ZNF547
TRAPPC2B
RAD23A
PDE4DIP
HGC6.3
ADCK5
BRD3OS
WFIKKN1
SSBP2
ZHX3
GLIPR1L2
ZBTB37
OSGIN1
BAIAP2L1
GFI1B
HEXIM1
SPATC1L
BTBD2
ANO7
FBRS
GCNT3
BSPH1
CXXC5
PBX2
SBNO1
STXBP1
HDDC2
CUL3
PBX1
SPOP
ULK1
SP4
TRAPPC9
ETS2
PXDN
CAPN12
IFI27L2
IQUB
C4orf19
USF3
CIB3
USP22
SPRING1
RNFT2
UBE2L5
PRELP
KASH5
ESRP1
ATXN2L
SCYL3
KCTD9
CDCA2
COTL1
JRK
SETDB1
UPF2
SMARCD3
H3-3B
CDK18
SLC29A4
LARP1
CACNG6
TRIB1
SYNGAP1
MRC2
APOBR
NPRL3
ATXN7
ZNF512B
ARF3
MTRF1
SMG7
VLDLR
SIGIRR
MSRB2
C10orf67
SUZ12
SPIRE2
C17orf58
DSTN
BFSP1
PI16
PRR12
USP34
TLCD1
UBE2B
CDKL3
SLC8A2
PHF21A
BIRC7
MTMR4
LRRN3
TMEM65
ARFGEF2
CATSPERG
RASSF2
PPP1R21
ZNF524
FIZ1
SP3
CBLC
USP38
BCAS3
JPH4
INTS9
HMBOX1
TUBA1C
C17orf64
TLK1
SP1
RNF43
USP32
KCTD13
POLK
CERT1
MSI2
MEAK7
FOXJ2
LARGE1
APPBP2
ACTR3
CLTC
CREM
ALKAL2
TFEB
MECOM
SP2
MYL12B
NAV1
CMBL
CAP2
CACNA1S
RSF1
AAMDC
FOXA2
C16orf72
ITPR1
MYADM
NIM1K
NAP1L5
RPH3A
EFCAB2
CDC42EP5
CTCFL
CST3
KCNQ2
SMURF1
ZNF148
ARID2
AP1S3
OCLN
FBXL19
LHFPL2
IGLON5
GREB1
DDI2
MED6
SATB2
NPEPPS
PHF23
CPLX2
RCAN3
FOXK1
PCBP2
ADNP
RASSF5
NKX2-1
DYNLL2
OR10H5
POU2F1
PPP1R13L
POLR1G
IL26
PRDM11
TXNIP
MDM4
ZNF205
CNPY1
STX16
BRPF1
KLK7
KCNK15
GTF2H4
TAF6L
FBXO11
SERPINA3
PI4KB
LHX6
VNN2
BRD2
PPM1D
DHX34
BBX
ATXN1
CREBRF
SIGLEC15
ZFR
AHCYL2
SKA2
PRR11
HSD17B14
PLXDC2
LMNB1
PTPRH
MLLT10
ADAMTS9
VILL
PLCB1
LAMC1
TMEM170A
HERC4
CA11
BRIP1
RNF19A
AMZ2
SMG1
PABPC1
HMGB4
RALY
BCL2L2-PABPN1
BCL2L2
RNF139
KCNN4
HMGN1
KMT2E
LRATD2
CROCC
WDR26
MEF2C
TSC22D1
AAAS
ARC
GNG8
WBP1L
STAT6
LMBRD1
ERICH6
GTF2IRD1
DCUN1D2
SBK2
BMI1
PPP2R5C
MRGPRE
RUNX1T1
BCAP31
ABCD1
PRPF40B
ORC4
MBD5
KLK6
SLC25A19
NCOA3
PKNOX1
CCK
FOS
HOXC11
GZMM
ZNF131
GRP
APCDD1
SEC13
ERF
ING3
NTNG1
IQSEC3
SOCS2
PHF2
ATP4A
MSRB3
MRPL38
LDB2
S100A16
MADD
PTGIS
DDX59
SCYL2
DEPDC4
PRAC2
PRAC1
DOK5
RIPOR3
RARG
TRA2A
KLHDC10
ATXN7L1
ZEB1
SELENOW
SHOX2
KIF6
TMC4
ROCK2
TMEM126A
GATAD2B
ZNF574
TMEM271
SLC6A1
NFAM1
KCNIP2
GNAS
TAF7L
SYNCRIP
PPP1R16A
COL20A1
PHF7
FKBP1A
BAP1
PRRC2B
ID2
RIMS2
NPC2
ISCA2
CAMK2D
RNASEH2C
IRX6
TM4SF1
TMEM30A
RBM27
GDF6
ARRDC4
TPBG
CAPN1
GABBR1
E2F3
ATF7-NPFF
ATF7
SEZ6L2
ASPHD1
UNC80
EFS
TLCD3B
LIN7A
UBTD2
SERPINI1
PDCD10
KSR2
CDKN3
TFAP2A
CWC25
TRAPPC2L
KCNB1
GALNS
DNAJC27
MTOR
KRT8
DPEP1
TCL1B
SDC2
LHX4
TASP1
GJA1
PRPF40A
ARL6IP6
GSC
ANP32B
CIART
AJM1
PTK6
NPIPB15
TNPO3
GET4
CFAP410
WNK1
SIPA1L1
IREB2
COLEC11
C1orf21
AURKC
TMEM26
METTL25
CCDC59
NUDT16L1
DUSP4
ZNF384
HSPA1L
HSPA1A
CPNE6
RGS9
FADS2
FADS1
CXXC4
MARCHF6
PDE1B
PRAME
PAN3
DICER1
RAB6A
ADRM1
RNF41
CTDSP1
PRSS22
MYOZ3
NUCKS1
GABPB2
EIF4B
RAP2C
HIF1A
RORC
RIN2
LRRC4B
DCAF5
ZNF462
STMN3
DGKH
ALMS1
BPTF
FIGNL2
FAM214A
DRAP1
C11orf68
ZNF768
TECPR1
JDP2
HINT3
INPP5F
PPFIBP1
SH3KBP1
CDC25B
RSPH6A
PTGIR
IKZF2
CTBP2
PODNL1
DCAF15
KCNK3
TRIM56
POLR2H
CLCN2
SV2C
MAD1L1
TTC6
SRSF9
FOXA1
DYNLL1
ACAP2
THRAP3
SKAP2
PCF11
BACE2
SCN1A
CACNB4
RC3H2
IPO13
TPT1
EBNA1BP2
CFAP57
TMEM119
NRL
DCAF11
ARHGAP22
TNS1
FAM117A
NRCAM
UBR3
SEMA3F
RICTOR
NR6A1
CSNK1D
BCAS1
ATXN7L3
TPTE
STRN3
AP4S1
ADGRG1
SLC39A7
RXRB
AMHR2
SCLY
UBE2Z
R3HDM2
IQCE
ZMYM2
ZBTB20
NKX3-1
SKIL
PRAMEF8
PRAMEF7
CDV3
OMA1
KLHL22
DAB1
PGAM1
EFTUD2
CCDC103
BCL9
MUC1
FAM168A
DUSP16
TMEM94
SNRNP200
BZW2
ANKMY2
ALPK1
TEDC1
MED25
CPLX1
BNIPL
HES3
SELENBP1
TMEM245
GJA5
UBR5
PTPRCAP
FABP6
TRIM9
CREBBP
AADACL4
RAB11FIP2
ZFHX3
SH2D3C
USP35
TOP3A
SOCS5
SMCR8
KCTD21
ELF2
DCDC2C
UBE2D3
SIX4
BASP1
ASPHD2
ZNF71
CD63
NEDD4
LGI4
SCAF8
TSC1
SYTL2
ABI1
YWHAB
SH3PXD2B
ITGB2
PHF1
NOVA1
SPOPL
NACC1
FEZF1
ASTN1
ACOXL
ZNF628
UBE2R2
FBLIM1
RABGAP1L
PNPLA7
MRPL41
ARHGEF5
RAB5B
OGA
AMPH
ZSWIM6
TRIM46
SEPTIN2
NUP155
MAPRE3
KCNJ15
HDLBP
TC2N
PGR
RPS19
KLF4
DNAH2
DENR
RASGRF1
DLX1
PRR5L
PLCXD1
NLGN2
GAB1
CBX8
MFN1
LYPD4
DMRTC2
ARHGEF35
AMOTL2
SMC2
AP1S2
JPT1
FOSL2
EYA4
ZDHHC17
VIPR2
STAU2
MED23
CST4
RIF1
HNRNPF
MBOAT7
XIAP
B3GALNT2
LRCH4
ILF3
FBXO24
CRHR1
MAPK3
CLDN12
SIX3
PLPP2
PIK3C2B
DTX1
C11orf86
PRDM12
USP25
TEX9
RFX7
NDRG2
ARHGEF40
PARD6B
MCTP1
CLIP3
TRIM33
SLC22A23
STX6
HOXA4
NUMB
CREBZF
APTX
POLR3F
PCK2
DZANK1
UTP18
MBTD1
LRP6
CEP170B
MARCHF10
LOC102723623
KCNV1
GOLGA6L22
GOLGA6L1
RUFY4
KAT6B
PAFAH1B1
FNDC11
FAM72D
FAM72C
ACER3
HDGF
CSNK1G1
COBL
BCAM
NYNRIN
ZFHX2
NEGR1
MGAT1
FAM53C
CDC25C
ARID4A
SHISA7
TUT4
SPRY3
STXBP5L
DRP2
DLG4
ACADVL
SUMO1
MYBPH
C1RL
SYPL1
ALX4
WDR45B
RBMS2
RABEP1
MACIR
INTS3
HOXC13
EXOC3L4
BAZ2A
ZNF277
PTPRD
NLK
DOCK4
TRAPPC3
THUMPD2
MAP7D1
FBXL13
ARMC10
SLCO2A1
FAM83A
CDC42
PSMD6
PPFIA3
C19orf73
ADAP1
RNF214
PRMT1
PCSK7
NPTN
MTRNR2L6
FAM110A
TCAIM
PHACTR3
PHACTR2
ITGAV
HBZ
STAU1
HNRNPH2
GLA
CRYBG2
PLEKHA6
PTPN4
MOCS1
CST5
CAND2
FOXG1
NCCRP1
HOOK1
SKOR1
POLD4
NPAS2
HPSE
ARHGAP5
POTEM
POR
MYC
DEFB4A
NCDN
KIAA0319L
EIF4A3
CDH18
UPK3B
UBE2E2
SEMA4D
HNRNPDL
CDK4
SPARC
LRCH1
CTNNA1
LHFPL3
HBA1
TLE2
POLR1D
LNX2
TRABD2B
SRGAP1
NR1D2
MFSD3
GNAQ
EIF5AL1
GPR162
CNTNAP1
CCR10
VSTM2L
STAG2
ARHGAP21
ZFAND3
PCDH20
FYN
CYP24A1
CAMK1D
CACNG4
C1orf159
SYNDIG1L
FUT1
FGF21
TXNL4A
CRIP2
AKAP13
SOX13
HEXB
PPP2R2A
RBM39
PDP1
MTRNR2L1
ADIPOR1
ATG9B
ADAM10
STK19
PPIL4
MMD
DXO
BMT2
TLE1
AZU1
ZBTB45
MINDY1
CIC
CARD11
WWP2
UBL4B
SHISA5
FHDC1
THAP12
KPNB1
GVQW3
FLT3LG
FCGRT
CCDC83
PRR7
PPM1H
FOXO3
TET2
PRPF3
MLF1
MAP2K2
C9orf152
ZIC4
RNF225
NME8
MAD2L1BP