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Life Science Database Archive
KOME

RMOS blastn result

Data detail

info Data name RMOS blastn result
info DOI 
info Description of data contents 

Results of blastn searches against the Rice EST Microarray (G-Array)

info Data file 
File name:
kome_rmos_blastn_result.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/kome/LATEST/kome_rmos_blastn_result.zip
File size:
74 KB
info Simple search URL 
info Data acquisition method 

Rice genome sequences used for the searches were obtained from the Rice Microarray Opening Site (RMOS).

info Data analysis method 

Performed blastn (blast 2.2.12) searches against the probe sequences on the Rice EST Microarray (G-Array).
The results are filtered with Expect values lower than 1e-10.

info Number of data entries 

5,024 entries

Data itemDescription
ACCESSION_NO Accession number of the full-length cDNA clone
CLONE_NAME Name of the full-length cDNA clone
ARRAY_ELEMENT Element number of the G-Array probe
PROBE_ACCESSION Accession number of the G-Array probe
PROBE_CLONE_NAME Clone name of the G-Array probe
EXPECT Expect value in the blastn search result
SCORE Score in the blastn search result