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Data name Database name DOI Description of data contents Data acquisition method Data analysis method Data detail
BlastX Result : TrEMBL AcEST 10.18908/lsdba.nbdc00839-003

Results of the blastx search of Adiantum capillus-veneris EST (AcEST) sequences against the UniProtKB/TrEMBL (release 39.9) database. The alignment information of each hit in the Blastx hit list is provided on a single line. CSV format text file.

blastx search

The blastx search was performed between Adiantum capillus-veneris EST sequences and the UniProtKB/TrEMBL database.

Data detail open_in_full
Gene expression data list AOE 10.18908/lsdba.nbdc00467-001

An index of public gene expression database.

ArrayExpress, Gene Expression Omnibus(GEO), Genomic Expression Archive

-

Data detail open_in_full
Experimental Condition Arabidopsis Phenome Database 10.18908/lsdba.nbdc01509-006

Environmental factor necessary to express phenotypes
- Light condition etc.
Plant Environment Ontology (EO) is used for standardization.
- Existence or absence of specified substances
The focused factors are standardized with ChEBI for substance names, and some properties.

Plant Environment Ontology, ChEBI

Data detail open_in_full
Image of Arabidopsis phenotype Arabidopsis Phenome Database 10.18908/lsdba.nbdc01509-002

Mutant images in "Observation of Arabidopsis phenotype"

Ds tagging line, Ac activation tagging line, Fox-hunting line

Data detail open_in_full
Observation of Arabidopsis phenotype Arabidopsis Phenome Database 10.18908/lsdba.nbdc01509-001

Observation data are distinguished by phenotype, method of mutation, mutant ID etc., and standardized with appropriate ontology terms. The listed observation data are correspond to original observation data one-to-one,which are presented in databases including Ds tagging line, activation tagging line, and Fox-hunting line.

Ds tagging line, Ac activation tagging line, Fox-hunting line

Data detail open_in_full
Data name Database name DOI Description of data contents Data acquisition method Data analysis method Data detail