ChIP-Atlas: Target genes

Potential target genes for Rfx3

Query protein: Rfx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671906 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx3's Target genes

◢ Rfx3: Average

◣ SRX7671906: Embryonic brains

◢ SRX7671907: Embryonic brains

◢ SRX1161945: MIN6B1

◢ Rfx3: STRING

Sema4b
Sik3
Pafah1b2
Ssbp2
Zdhhc1
Rfx1
Tmx4
Wdr90
Hydin
Srsf7
Ncoa5
Chd4
Ccdc30
Sdcbp
Anks3
4930451G09Rik
Sik1
Map9
Mks1
Mapre3
Pold3
Spef2
Fam227b
Dtwd1
Bbs5
Gar1
Ccdc57
Lrriq1
Dync2h1
Dcun1d5
Pnma1
Dnttip1
Fbxw7
Ufsp2
1700029J07Rik
Pigx
Cep19
Eaf2
9530077C05Rik
Xrcc1
Pinlyp
Map1a
Nudt2
Kif24
Wdr34
Eif2b2
Samd4b
Gmfg
Cfap44
Srek1
Kifbp
Poll
Dpcd
Cfap20
Dnajc16
B9d1
Cfap298
Pin1
Rundc1
Ptges3l
Dync2li1
Dyrk1a
Cfap65
3110082I17Rik
Wdr31
Ropn1l
Tctn2
Syt5
Rfx3
Pofut2
Map6
Ccdc181
Dusp18
4921536K21Rik
Fam214a
Dyrk1b
Mink1
Arl6
Cdk4
Tctex1d2
Morn2
Dhx57
Akap11
Tecpr2
Cinp
Ccdc39
Nr2f2
Sipa1l1
Mlec
Csnk1g2
Lrrc49
Saxo2
Efl1
Agtrap
Prr7
Tctn1
Dyrk3
Josd2
Rer1
Morn1
Ppm1e
Prdm4
Orai3
Lmbrd1
Lztfl1
Brms1
Ccdc13
Ankrd13d
Dad1
Abhd4
Nucb2
Txndc17
4933427D14Rik
Wdr27
1600012H06Rik
1700030J22Rik
Ptpn13
Prr3
Gnl1
Foxj1
Eif4a3
Meig1
Prkcsh
Ccdc151
Fanci
Tsnaxip1
Ranbp10
Etfbkmt
E4f1
Ube2o
Usp30
H1f10
Tmem138
Cyb561a3
Myg1
Fez1
Hspbp1
Nup50
Lmtk3
Ttll10
Morn4
Gcc2
Nek2
Hspa12a
Eno4
Rtca
Fam131a
Wdr60
Ccdc158
Mindy4
Phc2
Fam204a
Rpl30
Stk32c
Lrrc27
Ccdc113
Tasp1
Ywhaz
Pltp
Lrrc73
Prepl
Camkmt
Ccdc34
Elmod2
Tmem9
Iqsec1
Cfap54
Gtf2f1
Jam3
2410004P03Rik
Cherp
Irak1bp1
Cplane2
Chchd6
Cfap36
Ubn2
Cetn4
Bbs12
Sde2
Rnf141
B9d2
Klhl18
Kif9
Cep112
D3Ertd751e
Mafg
Crnkl1
Cfap61
Zfp24
Stoml2
Pcgf1
Cep162
Pak1ip1
Marchf8
Wdfy1
Itsn1
Cryzl1
Mbd4
Ift122
Cbx5
Katnal2
Jund
Nap1l1
Oscp1
Lrrc56
Hras
Ccdc184
Rsph1
Wdr35
Kif18a
Tbc1d32
Klhdc10
Sun3
Gm11992
Lca5l
Tada2b
Ccdc96
Cnpy3
Sirt3
Psmd13
Sf3a1
Ccdc157
Wdr78
Mier1
Ankef1
Zc3h3
Ccdc65
Rnf32
Rhbdd2
Brd3os
Lrrc6
Spats1
Bbs1
Ankfy1
Cfap43
Mok
Tsga10
Ubxn6
Smg7
Maats1
Dmwd
Smpd2
Ppil6
Ddx24
Trim2
Naa40
Nat14
Oxnad1
Dph3
Cfap97d2
Timm10
Ndufs5
Mtf1
1700037H04Rik
Iqch
Aagab
Braf
Ap1m1
Armc3
Traf3ip1
Zfp523
Prkar1b
Dnaaf5
Spata7
Eri3
Agbl3
Ap1s1
Tubgcp3
Tube1
Fam229b
Camk2a
Mycbp
Acap2
Rgl1
Arpc5
Ift57
Ralgapa1
Tomm7
Gemin8
Cep41
Ing1
Cabin1
Lsm10
Cfl1
Mrpl10
Lrrc46
Trub2
Ppp1r7
Pask
Efcab1
Gpn3
Fam216a
Hat1
Mapre2
Cfap221
Spef1l
Trip4
Csnk1g1
Mib2
Ppp2r1a
Tmem216
Gtf3c4
Ddx31
Dynll1
Cfap161
Dffb
Cep104
Prkar1a
Ctxn1
Rhpn1
Ebna1bp2
Cfap57
Mpc2
Dcaf6
Pifo
Ptdss2
Chchd3
1110051M20Rik
Uvrag
Ipo4
Dnajc1
Armc9
Neurl4
2810408A11Rik
Lrrc23
Fndc11
Dlec1
Gde1
AI429214
Nme7
Blzf1
Kcnip3
Gm12500
Ampd2
Rnf182
Mark3
Pgap3
Trit1
Ddx41
Pick1
Ttll9
1700010I14Rik
Cdkl4
Tnpo1
Plch1
Ttc41
Hsp90b1
Cdk2ap2
Ak1
Cenpj
Fam151b
Zmynd10
Msmo1
Dagla
Peli1
Katnal1
Parp8
Tbc1d19
Dlg4
Hsdl1
Dnaaf1
Dnajc15
Cdk9
Klhdc9
Dnajc27
Ehd1
Celf3
Asb7
Sertad3
Odf2
Dpy19l2
Nsmce1
Mrps9
Trim39
Ywhaq
Ccpg1os
Ccpg1
Nsdhl
Cetn2
Cfap74
Zfyve28
Cfap99
Actr6
Ttll3
Arid4a
Lrguk
Drc1
Slf1
2210408I21Rik
Tmem167b
Prmt5
Adgra1
Spice1
Lmna
Efhc1
Gtf2e2
Ap3d1
Ift22
Rlf
Sec61a2
Ift52
A930007A09Rik
Dnajc7
1700094D03Rik
Slc4a8
Pak4
Phf20
Abhd2
Tekt4
Nek11
Aste1
Mthfr
Clcn6
Alms1
Tctn3
Entpd1
Rap2a
Sec16a
Tbcel
Skiv2l
Nelfe
Kmt5c
Galk2
Cops2
Fank1
Dhx32
Ppp1r16a
Cenph
Epb41l4a
Leng8
Cfap69
Tfip11
Ttc26
Dcp1b
Stx18
P4htm
Iqca
Ubxn11
Orai2
Micos10
D230025D16Rik
Dnajc10
Rfc5
Tmem107
Glipr1l3
Taok2
4930505A04Rik
Mfsd4b4
Fam90a1b
Apoo
Ccdc126
Map3k12
Mlf1
Ptges2
Ywhae
Hsp90aa1
Uhrf1
Slc25a3
Stpg1
Nipal3
Tmem209
Ssmem1
Timm13
Kiz
Sf3b5
Ppp5c
Thbs3
Mtx1
Tmem218
Ppil4
Ccno
Spata2
Rnf114
Dnaaf2
Ift81
Stk11ip
Pbx4
H13
Tmem231
Kif6
Myo1e
Cenpf
Nbr1
Brca1
Afg1l
Spata6
Knop1
Iqck
Dhx16
Mapk15
Trip12
Fbxo36
Fbf1
Rpn1
Dnah10
Abi2
Tex9
Ccar2
Capn10
Intu
Acox3
Msi1
Rrp12
Hspa2
Cyth2
Zfp287
Odc1
Derl1
Marchf10
Glipr1l1
Gtf3c1
D430042O09Rik
Srfbp1
Ift88
Bub1
Pomt2
Gstz1
Cdca4
Ahi1
Spcs1
Glt8d1
Fam227a
Cby1
Eif2s1
Atp6v1d
Copz1
Wdpcp
Mdh1
Lyrm4
Fars2
Qtrt2
Ccdc191
Ubxn2b
Slc25a14
Tnks
Med9
Ccnc
Thnsl1
Enkur
Pitpnm1
Stxbp4
Cox11
Dnajc24
Rtl6
Rasal2
Cacfd1
Wars2
Pkig
Snrpd2
Qpctl
Dennd2a
Igsf11
Timm21
Fbxo15
Phc1
Klhl7
Naa20
Aopep
Pspc1
Med31
4930563E22Rik
D5Ertd579e
Zswim2
Dnah11
Cep128
Crocc2
Kif3b
Stk33
Mrpl39
Dym
Mast3
Hmgcr
Dnaaf3
Zfp36l2
Fam98b
Cplane1
Rab11fip2
Wdr13
Hmgn2
Wwox
Mafa
Mocs3
Dpm1
Zc2hc1c
Acyp1
Rpl35
Tsen2
Stx8
Cfap52
Ruvbl1
Spg21
Sdccag8
Cep170
Bbs9
Ulk4
Dixdc1
Mapk10
Rabl2
Cfap410
Repin1
U2af2
Ankrd54
Dusp6
Sgta
Calm2
Coq3
Rsph4a
Lpin2
Ttc34
Cmtr2
Coa8
Bag5
Deup1
Hsph1
Dnal1
Rfx2
Smc6
Gen1
Nsun7
Glb1l2
Cdkl1
Fgr
Cnnm2
Ppp4r3b
Pik3cd
Arf2
Spag1
Nme5
Fam110a
Psmc3ip
Gnaz
Rnf5
Ccdc180
Bdh1
Ecrg4
Adgb
Pcsk1n
Tufm
Cystm1
Zswim1
Get1
Zeb1
Cdc37
Cpd
Ano3
Ttc21a
Gorasp1
Smpd3
Sap18b
Sap18
Cluap1
1700037C18Rik
Zfp407
Ap3m2
Nsmf
Ankrd42
Usp29
Peg3
Fam81a
Pik3r2
Wdr7
Smc1b
Dner
Togaram1
Klhl28
Wdtc1
Bloc1s1
Shq1
Dnaja1
Zdhhc23
Erf
Nbas
Odf2l
Rrp7a
Wdr17
Safb2
Safb
Trim9
Wdr73
Tpgs1
Tedc1
Coq8b
Qsox2
Btbd9
Mthfd2l
Mypop
Zfp688
Spout1
Sorbs2
Tmem89
Ift172
Lekr1
Mrpl22
Ptpn4
Cog7
Ttc13
Arv1
Fzr1
Tcp11
Jun
Rpl24
Cdc14a
Ubxn10
Pla2g2c
Cwf19l2
Cep164
Aspm
Enkd1
4933405L10Rik
Bdp1
Rbks
Babam2
Zc3h10
Rsph3b
Dnaaf4
Wdr54
1700003E16Rik
Agbl4
Map3k14
Tent5c
Ppm1g
Nek4
Tmem108
Mzf1
Tmem260
Denn2b
Slc25a46
Dcaf12
Polk
Cert1
Itgb3bp
Efcab7
Cipc
Otub1
Gtf2ird2
Tsr1
Sgsm2
Znhit1
Plod3
Rps6kc1
Dusp3
Per1
Ap2a1
Shank3
P4ha1
Cfap20dc
1700016K19Rik
Smarcad1
AU041133
Spata24
Bcl2l1
Rab36
Yipf5
Nacad
Spaca9
Ak8
Ubl3
Dnah9
Trim33
Gnl2
Crip2
Mapkbp1
Fam47e
Galnt2
4930453N24Rik
Tcte1
Ankrd45
Polr2f
1700088E04Rik
Zmat2
Axdnd1
Wdr93
Pex11a
Fam120b
Zbed5
Tulp3
Rpf2
Zfp819
Lyrm1
Dcun1d3
Sfxn2
Arl3
Rpp38
Fam161b
Coq6
Xpnpep3
St13
Gpr19
Kifc3
Tmtc3
Cep290
Zbtb40
Etfrf1
Casc1
Dis3l2
Ccdc89
Vwa3b
Eftud2
Ccdc103
Tekt1
Chn1
Rtn1
1500009L16Rik
Pgs1
Arf3
Gatd1
Mcm7
Ap4m1
Dnal4
Tspyl5
Lrriq4
Lrrc34
Ccdc74a
Ssx2ip
Psma5
Bbs4
Tmem29
Akirin1
Spef1
Copb2
Casp6
Sfi1
Apc2
Zfp433
Gm32687
Inpp4a
Nek5
Lrriq3
Fpgt
Mex3c
Tdrp
Stk16
Glb1l
Cwc25
Lcorl
Fkbpl
Mul1
Tuba1a
Rnf139
Celf6
Plec
Spag6l
Ift74
Map7
E2f8
Crem
Srp72
Stk35
Rsph14
Usp20
BC005624
Tgfbrap1
AI597479
Ciao3
Ccdc102a
Zfp719
Cyp46a1
Pnkd
Yeats2
Btrc
Hnrnpf
Pyroxd1
Cxxc1
Ano6
Pibf1
Dis3
Rap1gap
Spata17
Gpatch2
Lexm
Fsip1
Faap24
Cfap45
Fbxl2
Gm1673
Dnajc30
Bud23
Sybu
Nphp1
Alkbh5
Wdr19
Pex11g
Pcnx4
Fam161a
Prkn
Pacrg
Ndufaf4
Trp53bp1
Oxld1
Ccdc137
Amz2
1700113H08Rik
Dnah7a
Mfsd4b1
Slc27a1
Zfp184
Dstn
Cep135
Katnb1
Chchd5
Ctnna2
Ndufaf7
Cebpz
Rtl5
Arhgap19
Kif23
Ttll4
Pakap
Fam183b
Pkd1
Pacrgl
Dhx40
Radil
Rd3
Tmem237
Zscan18
Glrx5
Kctd17
Fbxl14
Mgat1
Mpc1
Bphl
Pih1d2
Nkapd1
Pds5b
Pold2
Dhx30
Ogfod2
Elp1
Abitram
Sec23b
Mrpl44
Mlc1
Psmd8
Ndufaf3
Ptpn21
Arl8a
Eif5
Cldn9
Gas7
Qars
Hspa1l
Hspa1a
Sspn
Azin2
Rfc1
Gbf1
Sys1
Actr1a
Ttll13
Rpl22l1
Meak7
Ddx20
Plin5
Snx24
Ndc1
Klf2
Myo10
Rpgrip1l
Fto
Fbxw9
Hgs
Arl16
Whrn
Tbc1d22a
Rab28
E2f5
Ttc30b
Cibar2
Pfn2
Rspry1
Psme3ip1
Tbc1d16
Ccdc40
Fig4
Ak9
Fam219a
Dnaic1
Tpm3
Clba1
Magi2
Dclk1
Spag8
Lca5
Lrrc51
Creld2
Alg12
Tmem53
Armh1
Ppp1r11
Cep126
Dynlrb2
Ttc12
Dmtn
Arl4a
Elmod1
Gdpgp1
Cib1
Prkaa1
Edem3