ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX499117 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◣ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Ccdc110
Cdk12
Ercc6l2
Wdr77
Atp5pb
Styxl1
Mdh2
Dhx8
Faap20
Mrpl28
Lrrn2
Psmd5
Mtf2
Rbm39
Supt5
Tmem270
Denr
Ankrd39
Pcdhga12
Zfp317
Qrich1
Porcn
Nop14
Grk4
Eif4e1b
Rraga
Stk38
Trappc3
Mib2
Snrpe
Phc2
Dhx32
Micos10
Lima1
A2m
Ahcyl1
Ccdc88c
Rc3h2
Tnfrsf21
Prdm14
Lif
Mapk14
Slc26a8
Lrpap1
Gjc1
Mterf1b
Tmem14a
Scamp5
Gprc5b
Cst3
Zfp42
Eif1ad
Banf1
Vps18
Gdf5
Mterf1a
Timm22
Polr3k
Slc7a3
Vav2
Ireb2
Mettl16
Cstdc2
Abcf2
Rac3
Abca14
Slc25a1
Fbxo27
Armcx1
Ephb3
Usp48
Fntb
Pdzd9
Surf6
Hlf
Scnn1g
Pik3r4
Zfp638
Basp1
Trp53bp1
Pou2f2
Snai1
Arf3
Sec23ip
Kif18a
Mrps14
Npr1
Ccdc126
Zfp623
Enpp3
Col1a1
2410137M14Rik
Rae1
Stxbp4
Cox11
Pafah1b3
Scaf4
Ell2
Eif5a2
Stk35
Naa38
Cyb5d1
Spp1
B9d1
Zfp658
Rnf10
Ankfy1
Bod1l
Rab27a
Sfi1
Stk11ip
Slc36a1
Polr2e
Ube2d3
Btbd10
Bcl2l1
Pafah2
Snx18
Huwe1
Dpy30
Drosha
6030458C11Rik
Gm5544
Aadat
Trpm3
Stag3
Gpc2
Slc12a9
Elf3
Smarca5
Ephb1
Arl15
Lix1
Rps19
Ccdc194
Dnajb4
Fubp1
Kcnh1
Rab37
Pdzd2
Tmcc2
Cirbp
Wrap53
Trp53
Tmem95
Rspry1
Psme3ip1
Apmap
Mlf2
Crk
Selenom
Myo10
Rpl7a
Med22
Rif1
Nudt1
Pkd2
Adprhl1
Adnp
Dusp13
Piezo1
Eif4a3
Vegfa
Rbm4b
Tinf2
Mymx
Nsun3
Cdc5l
Csrp1
Mrps28
Gse1
Catip
Cilk1
Zyg11a
Acaa1a
Myd88
Cpeb3
Josd2
Ifrd2
Zbtb40
Ccin
Prrt3
Cdk5rap3
Ppdpf
Gm14393
Phc1
Dffa
Amt
Rnd3
Nat8f4
Adra2b
Atp5j2
Hspa4
Nudt13
Gstm1
Slc39a14
Ppp4r3b
Trappc2
Ofd1
Ddx20
Gadd45b
Psmb2
N4bp2l2
Calr3
1700030K09Rik
Edrf1
Arih2
Med23
Usp44
Mgat5b
Cnpy1
Phf12
Tsc22d1
Mcts2
Rps3a1
Cep112
Trim36
Mtnr1a
Ncoa4
Dusp23
Mms22l
Nme8
Grik4
H2bc22
H2ac22
Tcf7l1
Nanog
Khsrp
Vegfc
Phf23
Wdr27
1600012H06Rik
Wnk1
Ifitm1
Bdh2
Rfx1
Med1
Zfp819
Rbm14
Gm21992
Adgrb2
Racgap1
Creld2
Alg12
Rapgef1
Zcrb1
Pphln1
Fam161a
Irak2
Gm10634
Slc15a1
Gm5155
Cnnm2
Zfp148
Tsen54
Caskin2
Ist1
Tomm20
Efnb1
Ogt
Slc2a1
Rab38
Upf3a
Cep85
0610040J01Rik
Tmem143
Syngr4
Gm11100
Prickle1
Gm3696
Megf8
Arnt
Anp32e
Vta1
Mllt1
Tns1
Rufy4
Ntn5
Tubgcp5
Sik2
Srsf10
Zscan22
Micalcl
Rnpc3
Pibf1
Dis3
Riok2
Puf60
Ergic2
Sugp1
Mau2
Fam118a
Rabl3
Gtf2e1
Rfx4
Epb41l4a
Ddx58
Asph
Dnah8
Hmces
Gadd45g
Mrpl39
Pelp1
Fubp3
Bcat1
Cd164
Endov
Flvcr2
Asmt
Poc5
Slc2a4
Lpar1
Slc25a45
Gba
Pnpla6
Cdc42ep4
Ptgr2
Slc12a6
Tfap2c
Spns1
Cwc25
Ahctf1
Prmt8
Flrt3
Taf1c
Pcdhgc4
Oasl1
Adap1
Uqcrc1
Zfp960
Serinc5
Hsbp1
Mfsd8
Spdl1
Tmem242
Rbpj
Med11
Fitm2
Mc3r
Atg16l1
Zcwpw2
Azi2
Rhpn2
Rnf125
D1Pas1
Sap30bp
Recql5
Ttc41
Hsp90b1
Ndufaf3
Smim10l1
Pkia
Nyx
Scgb1c1
Fmr1nb
Stat6
Pccb
Mafb
Npm1
Banp
Arhgef17
Mpc1
Gm5165
Zfp286
Tbc1d9b
Pipox
Smg5
Vmn2r12
Meltf
Ninj2
H4f16
Akap11
Hesx1
Abhd18
Zfp566
Micu2
Rrp9
Parp3
Cdh23
Mob1b
Sms
Cep70
Yod1
Fem1b
Islr2
Ripply1
2410141K09Rik
Gpr1
Sh3rf3
Entpd6
Ntrk2
Dpep2
Lactbl1
Lsr
Fam187b
Serpina3i
Mllt6
Prcc
Gcc1
Tonsl
Snx10
Rpl7l1
Haspin
Ddhd2
Cdc20b
Slc6a19
Deptor
Clu
Cenpt
Col23a1
Adgrv1
Slc35b1
Rgs9
Dbr1
Samd9l
Tpm1
Sema5b
Gm3558
Tmem211
Top1mt
Inppl1
Traf5
Herc1
Mtss1
Ube2q1
Adam19
Clec12a
D830030K20Rik
Ndufv1
Plin3
Epc1
Radil
Nupl1
Golm2
Cox7a2l
Agbl3
Trpm5
Npepps
Spr
Ndufaf6
Zfp386
Slc38a9
Ino80
Cnot10
Lsm11
Fancg
Cped1
Scn3a
Sh3glb1
Ttll1
Tmem47
Zmat5
Uqcr10
Tfap2a
Cct8
Snx15
Gm38396
Mcf2
Wnt7a
Med16
Cdk20
Rerg
Phf5a
Aco2
Pcmtd1
Dnajc6
Zfp428
Tmem218
Polr1b
Nog
Sun1
4833439L19Rik
Polr3b
Upp1
Tlr2
Nkain4
Thada
Polr2b
Noa1
Insyn2b
Ttc14
Calhm5
Zfp180
Mmut
Cenpq
Pou5f1
Snapc5
Rnf4
Nceh1
Otos
Nsun6
Arl5b
Dgkh
Dctn2
Ube2j2
Srrt
Lrrtm3
Lrrc71
Adra2a
Rpl26
Rpl12
Lrsam1
Gins4
Tmem220
Terf1
Slc25a11
Rnf167
Ncapg
Galp
Zfp574
Dock5
2010003K11Rik
Psma1
Lrif1
Gabrp
Scn1a
Tedc1
Adamts17
Rnf150
Gm20594
Kazald1
Steap1
Pdxdc1
Mpv17l
Gpatch3
Kdm3a
Naa50
Atp6v1a
Snrpc
Arhgap28
Rnf43
Rbm17
BC004004
Klhdc9
Hscb
Chek2
Zfp97
Ess2
Mrm2
Npff
Mob1a
Abr
Spata20
Ciao3
Apbb2
Gtsf1l
Dhcr7
Idnk
Defb1
Gstm6
Atp8b5
Pex10
Parp11
Cemip
Wnt5b
Fgf18
BC107364
1700008O03Rik
Pafah1b2
Otx2
Sik3
Add1
Pds5b
Mycl
Gata3
Plekhb1
Alg8
Dnajc12
Gm2237
Nfkbiz
Dmtn
Rrs1
Alkbh7
Hoxa5
Cryba4
Tmem154
Arfip1
Mbtps1
Ltbp1
Brwd1
Tle3
Srek1
Ptpru
Etv1
Itgb6
Ccnd3
Ddx47
Rad51d
Slfn10-ps
Nudt17
Fam220a
Filip1
Tmem18
Trim71
Plekhg2
Ago2
Atp2c1
Tbrg1
Tmem209
Ssmem1
Cast
Stmn1
Psmd8
Vps35l
Rtca
Homer3
Zzz3
Ankrd13c
Mycn
Bmp4
Dhrs7b
Chaf1a
Ltbp2
Fam76a
Zfp871
Gjb3
Tcf3
Wdr18
Rbm26
Gm3752
Zfp345
Sypl2
Tmprss9
Slc6a8
Lman2
Gm33933
Zfp408
Tmem191c
Sdha
Ccdc127
Rpl10a
Ocm
Pde7b
Slc35b4
Rcbtb1
Synm
Drg1
Gm3739
Glipr1l3
Lgi4
Apob
Gm51425
Alad
H2bc4
H2ac6
Nid2
Nol11
Amz2
Qtrt2
Ccdc191
Ror2
Rprm
Stk38l
Tmem101
Gm1070
Tspyl1
Fcor
Gpx1
Gmppa
Ccdc83
Psmd3
Sema6c
Bms1
Apol7a
Dguok
Naa35
Prepl
Camkmt
Rpl23a
Nr6a1
Sulf1
Ryr2
Polr3e
Trappc3l
Egr2
Msi1
Mphosph8
Rbm25
Pop7
Gabpb2
Kif2c
Praf2
Fbxo15
Lpar6
Dppa5a
Plekho2
Gramd3
Gm3173
Dars
Polr3f
Dzank1
Cluap1
1700037C18Rik
Tgfb1i1
Cox6b1
Ube2d2a
Sp2
4833420G17Rik
Cgnl1
Tomm40l
Ccdc63
L3mbtl2
Gm6712
Timm21
Thbs2
Pde1b
Phlpp1
Snrpg
Adgrg5
Klhl18
Kif9
Psph
Cct6a
Crybg1
Hcrtr1
Plk2
Gcat
Pglyrp1
Itga9
Sp1
Crebzf
L1td1
Tgfb3
Thap1
Dcbld1
Cbx5
Mad1l1
Zfp493
Bcl3
C2cd4b
Vstm2l
Pcdhgb8
Ly6k
Hvcn1
Gnpnat1
Fbxo11
Rpusd1
Chtf18
Cdipt
Cdiptos
Kctd7
Donson
Prss48
Gid8
Dido1
Abca1
Pigo
Zfp622
Sbno1
Ccdc62
Asb16
Cd276
Zfp689
Pemt
Nectin2
Zfp947
Pde2a
Hsd17b6
Lyzl6
Pbld2
Hnrnph3
Cerkl
Agfg1
Il33
Atg101
Def6
Chd9
Vmac
Ndufa11
Relch
Pign
Kmt5c
Pym1
Strip1
Tent5b
Cryzl2
Trim34a
Rps23rg1
Pts
Coq8a
Mertk
Nanp
Daam1
Kifc3
Wif1
Vkorc1
Cep170
Sdccag8
Abl1
Cfap70
1700125H20Rik
Dcp1a
Afap1l2
Cntnap2
Gm3488
Fam189a1
Abcb8
Abcg2
Krcc1
Ovca2
Saa3
Coq10a
Cpsf6
Ywhag
Prickle2
Gm45871
Rpp38
Ccdc142
Frzb
Etfrf1
Casc1
Ldb1
Gm10406
Gucy1a2
A630001G21Rik
Med12
Poglut3
Wsb2
Eif3f
Upf3b
Barx2
Nktr
Fmnl3
Tex9
Dync1i2
Gsta4
Kcnmb2
Pgap3
Vps4b
Il18
Bco2
Ints9
Hmbox1
Pax2
Mettl3
Ppil2
Troap
C130074G19Rik
Cdx1
Mcmdc2
Tha1
Ndufa12
Cpsf4l
Plekhf2
Zfp54
Cenpu
Comtd1
Itgb3bp
Efcab7
Wdr38
Smc1b
Tph2
Rsad1
Churc1
Cfap100
Atp5mpl
Hip1
Mad2l1bp
Acp2
Slc5a6
Atraid
Timm13
Bambi
Srp19
C1rl
Rpp40
Nfe2l1
Dnajc21
Lrfn2
Scamp3
Zfp13
Ska2
Prr11
Tfe3
Stap2
Mpnd
Zkscan2
Nlrc4
Atf7
Idh1
Virma
Dennd2c
Oas1g
Hck
Gchfr
Sbk2
Tnfrsf19
Slc15a4
Parl
Liph
Dner
Tomm7
Tafa5
Zfp369
Zfp738
Icam4
Gpx8
Kdm4d
Cwc15
Tex19.1
Spock1
Dpp6
Ptpn4
Tnfaip1
Ift20
Xrcc5
Pik3r2
Thap7
Mobp
Ptrhd1
Cenpo
Necab2
Rpl22
Cidea
Upk2
Copb2
Fbxw10
Vps28
Taf5
Mad2l2
Atp6v0d1
Tsnaxip1
Ranbp10
Rad51
Cblc
Ppm1f
Dlgap4
Kcnj6
Trim66
Zfp595
H4c18
Mad2l1
Stat3
Rlim
Cd2bp2
Kif26a
A830018L16Rik
Olfr15
Txnl4b
Dhx38
Ints12
Gstcd
Smim19
Slc20a2
Get4
Mmachc
Msh6
Ccdc163
Cep135
Pdk1
Atp5g1
Slc39a13
Oas1a
Map3k7
Btbd16
Shpk
Ctns
Cstf3
Serpinb9
Slc33a1
Mtus1
Prdx1
Spc25
Thoc6
Hcfc1r1
Men1
Prex1
Sh2d5
Slc12a2
Smc3
Depdc1b
Cep164
Utp3
Stil
Knl1
Nvl
Pacsin2
Ddx24
Slc43a1
Shisa2
Rbm46
Ufl1
Zfp955a
Ssbp1
Chmp2a
Spg11
Ints4
Tmem29
Wipf1
Frg1
Stk40
Megf10
Erap1
Zwilch
Rpl4
Mcidas
Spata33
Chmp1a
Nufip2
Tigd2