ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1054887 | Embryonic brains
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◣ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Mindy4
Nufip2
Zfp800
Med25
Nhsl1
Dhx32
Mrpl28
Pcyt1b
Eif5a2
Stk11ip
Rspry1
Psme3ip1
Pou2f1
Lrrn2
Tnrc18
Abca4
Rabl3
Gtf2e1
Il18
Bco2
Mlc1
Dhrs3
Msi1
Eif1ad
Banf1
H4f16
Phf23
Surf6
Cpsf6
Prdm12
Zfp623
Slc45a3
Kazald1
Fgd4
Vldlr
Polr3k
Zfp9
Insm1
Ptbp1
Mmut
Cenpq
Zscan22
Sybu
Vax1
Myo10
Tmprss11e
Tbc1d22a
Clasp1
Lingo2
Epc1
Ska2
Prr11
Zmym4
Zfp428
Khsrp
Polr2e
Ttc41
Hsp90b1
A2m
Nfkbiz
Lmo3
Epb41l5
Nudt13
Ptger2
Lix1
Mafb
Sap30bp
Recql5
Pcnx3
Map3k11
Gtf2ird1
Pkdcc
Mettl8
Dcaf17
Tle4
Acaa1a
Myd88
Hsbp1
Tprgl
Lmo1
Adnp
Kdm2b
Hpgd
Psat1
Krr1
Mecp2
Camk2a
Rhobtb2
Clu
Bmpr1b
Ccdc177
Nemf
Xxylt1
Ermn
Poc5
Senp7
Fsbp
Ankrd40
Rnh1
Zfp180
Kmt5c
Med6
Alg8
Ctbp2
Zfp574
Slc1a5
Virma
Sec61b
Alg2
Actr1a
Asf1b
Cwc22
Dipk1c
Drosha
6030458C11Rik
Pigo
Zfp729a
Hscb
Chek2
Mzf1
Naa50
Atp6v1a
Ppia
Mdm1
Calr3
1700030K09Rik
Psmd11
Gm5165
Polg
Clcn3
Cep120
N4bp2l2
Trim35
Pipox
Sorbs2
Ccdc12
Mrpl23
Snrpc
Tet3
Lmln
Rpl13a
Arfip1
Rtn4
Tle3
Btbd17
Arih1
Mtus1
Slc38a9
Myt1
Zfp386
Helt
Dhrs7b
Pdgfra
Rpf1
H2bc4
H2ac6
Cntn6
H4c18
Ifrd2
Sft2d1
Polr3b
Trim11
Riok2
Tysnd1
Klhl18
Kif9
Mphosph8
Rcn3
Slc35b1
Arvcf
Vps28
Zswim1
Stk35
Asmt
Tigd2
Adgrv1
Btbd8
Dcaf11
Sec13
Neurl2
Ctsa
Prrx1
Numa1
Pld1
Psd3
1700113H08Rik
Sv2b
Rgs13
Ndst1
Gng2
Tspan9
Tmx1
Mylpf
Gm973
Tbc1d10b
Oma1
Six3
Hexim1
Ing2
Inip
Rfx4
Lrr1
Arhgef10l
Polr3h
Dusp6
4833420G17Rik
Knl1
Grcc10
Rpusd1
Chtf18
Cox7a2l
Dennd2a
Zfp608
Ankrd29
Imp4
Ccdc115
Clasp2
Mrps28
Tspan17
Camk1g
Nup205
Fam118a
Eef1a1
Sat2
Plpp3
Marcks
Itfg2
Kdm4a
Mtf2
Gba
Pip4p2
Yipf1
Lrp8
Thyn1
Acad8
Ostc
Prmt3
Rbm12b2
Srek1
Znrd1as
Znrd1
Abcf2
Atp5mpl
Thoc3
Prickle2
Hacd3
Usp39
Hnrnph1
Zfp622
Cdk12
Prcc
Txnl4b
Dhx38
Urm1
Luc7l
Zfp960
Maz
Zkscan5
Bcar3
Klhl9
Emc7
Nupl1
Tmem47
Ccpg1os
Ccpg1
6720489N17Rik
Mob3a
Izumo4
Adamtsl1
Igf2bp3
Spop
Rab7
Twistnb
Ascc3
Tmem218
Cntln
Men1
Psma1
Uchl1
Prepl
Camkmt
Slc39a9
Erh
Lrrtm2
Sema4c
Ndufb4
Itgbl1
Camsap1
Smpd4
Hunk
Bfsp1
Cdk1
Phf5a
Aco2
Med23
4930583I09Rik
Lypd4
Dmrtc2
Zfp317
Anp32e
Tcf4
Ell2
Slc18a1
Trib1
Atp6v1b2
Cwc25
Nat14
Itgb8
Nifk
Peak1
Hmg20a
Ints12
Gstcd
Rcan1
Ccdc190
Wdr95
Tmem219
Rps8
Pprc1
Fabp7
Syncrip
Flcn
Tecr
Oasl1
Noct
Gm6712
Ube2b
Ttll9
Scg2
Tgif1
Igsf10
Ppp1r9a
Srsf11
Lrrc40
Abcd2
B4gat1
Tm2d2
Adam9
Nsun5
Sec22a
Lmo2
Seh1l
Sfswap
Mvd
Utp3
Wdr33
Ppan
Gas1
Stap2
Mpnd
Sc5d
Tomm20
Aff4
Zc3hc1
H4c17
Rplp2
Celf2
Mbnl2
Ccdc194
Pcdhgc4
Mettl3
Eif3f
4930402H24Rik
Gm51425
Polr2a
Gse1
Ints9
Hmbox1
Cenpu
Spsb4
Os9
Phactr1
Fam181a
Gucy1b2
Fgf7
Mterf1a
Dnajc16
Plekhg1
Rps7
Kif18a
Kcnmb2
BC107364
Cdipt
Cdiptos
Fam149a
Glmp
Acyp1
Rps11
Ubxn6
Hdgfl2
Dhx8
Laptm4a
Trak1
Map2k6
Dct
Coq8a
Hnrnpul1
Riok3
Phc2
Zfand6
Rest
St7
Fmn2
Lpxn
Zfp91
Nat8
Ybx1
Acaa2
Ubp1
Zcchc7
Srp68
Ednrb
S1pr1
Agbl5
Lrfn5
Eif3d
Ctdp1
Usp1
Krtap3-3
Trp53bp1
Amt
Snrpd3
Gucd1
Ankhd1
Arx
Nup85
Pcdh8
Enpp3
Dab2ip
E2f2
Snapc2
Phc1
Ric8b
Rps29
Kat7
Dcn
Fgfbp3
Lpar4
Amn1
Prkacb
Elmo2
Lrrtm3
Thada
Rufy3
9430015G10Rik
Bcl9
Rpl32
Ptrhd1
Cenpo
Gapdh
Add1
Pnn
Nvl
Thap2
Prkcq
Cstf3
Phf12
Mad2l1
Lin7c
Siah3
Homer3
Scrn2
Kmt2d
Psmf1
Ppip5k2
Gin1
Trafd1
Evi5l
Alyref2
Stc1
Lpin2
Chmp2a
Pmch
Gas8
Cibar2
Tafa5
Ranbp3
Slc9a5
Fhod1
U2af2
Zmynd8
Cand1
Usp31
Ctnnb1
Arhgef19
Tcof1
Rgs8
Gm5148
Creb5
Rrnad1
Isg20l2
Zeb2
Rab3ip
Kyat1
Tlx3
Tbc1d9
Zfp605
Tuba1a
Sp2
Tcp11
Zbtb38
Rnf5
Ago2
Cs
Npepps
Cbx5
Med16
Tspan31
Sspn
Bcl11b
Tomt
Lamtor1
Fxn
Cnot1
Tnks2
Miga1
Cipc
Dhx16
Ccp110
Tdrd7
Smim19
Slc20a2
Hnrnph2
Gla
Spink10
Fbxo38
Atp6v1f
Rad51ap1
Uprt
D6Wsu163e
Gjb1
Rhoj
Cenpm
Arhgap15
Cdk19
Mfap3l
Ascc1
Anapc16
Pnkd
Nucks1
Rhpn1
Fndc3b
Ltbp1
Grip1
Ezh2
Poldip3
Trmt112
Prdx5
Erich1
Tgfb3
Mob1b
Msantd4
Spry2
Nolc1
Ddx19a
Wls
Ccdc171
Tmem201
Zbtb18
Irgq
Itpr1
Spata7
Ptprg
Plin3
Alpl
Psmd5
Snapc5
Ccnl2
Ptma
Pan2
Zfp869
Vps33b
Tagln3
Gpx8
Ttc25
Akirin2
Mtr
Rbm6
Ubxn4
Uvrag
Mpv17l2
Ttc9c
Hnrnpul2
Slc4a2
Cabcoco1
Xrn2
Lman2
Exosc4
Sigmar1
Hspa9
Zfp955b
Hjurp
A730008H23Rik
Sumf1
Smim7
Naaa
Zfp369
Ndufa3
Nudt5
Cdc123
Poc1a
Oscar
Jdp2
Fam110b
Supv3l1
F8a
Vcam1
Sp1
Arhgef17
Ints6
Pemt
Zfp871
Flrt3
Cep170
Rps19
Gabpb2
Sdccag8
Arhgap26
Nacc2
Ahctf1
Tube1
Fam229b
Bet1
Glipr1l1
Sash1
Hmga1b
Hmga1
Fyco1
Armc8
Gadd45g
Tmed10
Pard3
Bend3
H2bc14
Setd1b
Ambra1
Uba1
Oxr1
Pde1a
Med24
Rpl9
Lias
Ankrd6
Zzef1
Cyb5d2
Zbtb5
Strip1
Ddr1
Ppp4r2
Hip1
Tnpo2
Tcf3
Zfp354b
Ttc32
Mtmr2
Mepce
Zcwpw1
Vmac
Ndufa11
Klhl5
Ube2cbp
Wdr6
Dpy30
Gripap1
Kctd5
Prdm4
Sac3d1
Stoml2
Fuca1
Nucb1
Cyp2j9
Tonsl
Sf3a1
Ccdc157
Nop53
Zfp46
Zfp454
Frrs1
Acad12
Plekhh3
Decr1
Zfyve28
Cfap99
Arl4d
Def8
Atg4c
Adgrb2
Taf6l
Coq8b
Proser1
Nhlrc3
Esrrg
1700008O03Rik
Tril
Arhgap11a
Sp5
Hdac9
Tti2
Aptx
Gldc
Tacr1
Arnt
Tma7
Ccdc51
Mlf2
Zfp444
Zfp738
Tufm
Mycn
Pcdh18
Slc26a7
Sms
Zbtb6
Phyhipl
Sbk1
Foxj1
Rufy1
Rdm1
Zfp13
Cnot6l
Tbc1d32
Larp4
Hdac1
Sema4b
Cc2d1b
Uqcrq
Tef
Map2k7
Zyg11b
Ddrgk1
Tars
H4c1
Kbtbd8
H3c1
BC049762
Clk4
Cfdp1
Txndc12
Btf3l4
Tsacc
Cct3
Zfp146
Tcea1
Mageh1
Srpk2
Tstd2
Ncbp1
Selenot
Leprot
Abcc10
Trdmt1
Tpmt
Kdm1b
Wwox
Nsa2
Gfm2
Tmem131l
Slx4ip
Mkks
Mrps11
Mrpl46
Naa16
Fem1b
Ccdc107
Lsm4
Edn1
Zfp260
Pcf11
Ipo11
Helb
Fzd1
Mcf2l
Arhgap42
Dad1
Abhd4
Cops4
Tmem29
Sarnp
Ormdl2
Nwd1
Ctnnal1
Kcnip3
Zfp773
G2e3
Marchf6
Stx5a
1700092M07Rik
Pramel12
Mypop
Dock9
Tcf12
Nup153
Pop7
Donson
Lgals12
Vcp
Cyyr1
Jmjd1c
Ptgr2
Rad54l
Poglut3
Heatr1
Rps26
Zfp457
Bcl2l12
Anks1b
Cntn4
Arhgap32
Leng8
Hmx3
Rpl23a
3300002I08Rik
Entpd1
T2
Wdr76
Mfap1a
Lpar2
Gpx4
Sox4
Dlx1
Prcp
Ttc21b
Ddias
Cr1l
Scn2a
Ppt1
Abhd8
Mrpl34
Taf5
Hspa4
Rragd
Ccni
2010109A12Rik
Gtf3c6
Zcrb1
Pphln1
Castor2
Clec2d
Fbxo36
Magi1
Gss
Rcbtb1
Cdk5
Uros
Bccip
Arid4a
Tmem109
Taf6
Cnpy4
Retsat
Elmod3
Dpp6
Pigc
4930558K02Rik
Ttc33
Ints10
Mvb12a
Shd
Mxd4
Tcerg1
Gpr89
Commd4
Scnm1
Lysmd1
Ptges2
Psmd1
Stil
Mpdu1
Vit
Nlk
Pkm
Plekhg2
Tmed7
Eif1a
Nrde2
Nckap5
Gadd45gip1
Dcaf10
Polr3e
Rmnd5b
Nsmce3
Wdr55
Dolpp1
Smarca2
Lhx6
Mcts1
Zfp870
Gpm6a
Limch1
Kctd13
Gm38396
Metap2
Usp48
Atad2
Taf13
Slc35a1
Ppp1r10
Fbxl19
Slc31a1
Fkbp15
Etv5
Snx11
Tdrkh
Cntnap3
Ccdc126
Derl1
Qrich1
Hexim2
Rbm34
C330018D20Rik
Tpd52
Chrm4
Rbm42
Nsun4
Syn3
Tbc1d14
Abhd11
Dnal4
Kdm4d
Cwc15
Ube2j1
U2af1
Ctu1
Chkb
Edaradd
Rapgef2
Sema3a
Zfp207
Mrpl11
Fbxo15
Nrf1
Gadd45a
Hax1
Timm21
Sox8
Lsg1
Nucb2
Trmt2a
Ranbp1
Med13
Prdm9
Idh1
Pafah1b3
Tjp2
Hlf
Rnf10
Pikfyve
Katnal2
Aatf
Cldn22
Shc3
Spr
Arhgap28
Rangap1
Cfap20
Kbtbd3
Aasdhppt
Pde4b
Zfp128
Ddx56
Cep112
Tmed1
Mthfs
Otub2
Zcchc8
Tiam2
Syne2
Qtrt2
Ccdc191
Upf3b
Selenos
Tasp1
Cop1
Marf1
Spag9
Zfand4
Selenoh
Wdr12
Carf
Rnf122
Mfap1b
Ank2
Rap1gds1
Slc25a18
Ing1
Megf8
Gpn3
Fam216a
Abhd1
Cenpc1
Ccdc9b
Fam193b
Ing4
Dele1
Cdkn2d
Lclat1
Sec23ip
Sde2
Thap4
Clec12a