ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Tcstv3
Cldn34d
Kpna1
T2
Gopc
Nepn
Brox
Aida
Asmt
Mia2
Il31ra
Phrf1
Oga
Dnmt1
Ptcd2
Mrps27
Prkdc
Mcm4
Rita1
Ddx54
Cd164
Tjp3
Pip5k1c
Ift27
Sod2
Oasl1
Uchl1
Mapk8ip1
H2-DMa
Brd2
Git2
Ankrd13a
Asah1
Duxbl3
Duxbl2
Duxbl1
Rpl22
Fam53c
Taf15
Tmem125
Tacc1
Wasl
Fam227a
Cby1
Akirin1
Bzw2
Ankmy2
Ptov1
Ccdc85c
Cnot6
Prox2
Dlst
Dbp
Car11
Ptcd3
Polr1a
Sash1
Ap2m1
Cmc2
Cenpn
Rarg
Tom1
Olfr806
Nphp4
Kcnab2
Paxip1
Gipc1
Dut
Rpn2
Mroh8
Calm3
Eif3b
Trip10
Gpr108
Cdiptos
Cdipt
Rusc2
Mycbpap
Tigd5
Eef1d
Pknox1
Iqce
Brat1
Septin11
Slc39a3
Vangl2
Abhd6
Cspp1
Cops5
Cln8
Fchsd2
Vmn2r102
Cdh12
Prdm10
Them6
Mrps11
Mrpl46
Aldh4a1
Spata17
Gpatch2
Atp6v0c
Atg12
Ap3s1
Dot1l
Por
Pfdn4
Cenpe
Rfx1
Madd
Lyrm1
Dcun1d3
Eed
Raly
Prr19
Pafah1b3
Flcn
Akt2
Zfp24
Diaph1
Sp2
Slc35e2
Sspn
Ifna13
Arntl
Galnt10
Uros
Bccip
Rab5b
Dpp9
Celsr3
Tepsin
Ndufaf8
Rab28
Iqch
Aagab
Zfp383
Zfp27
Myh14
Prkci
Ptdss1
Mterf3
Sharpin
Maf1
Gm35339
Timeless
Hrc
F830045P16Rik
Rpl19
Cacnb1
Foxp2
Arid4a
Rbbp6
Rnasek
0610010K14Rik
Tcp11
Ak1
Atrnl1
Fbxo33
Hdac2
Prrt1
Ppt2
Kcnn4
Apobec2
Zfp526
Dedd2
Chmp3
Paip2b
Pcdh9
Dohh
Mblac1
Gnb2
Sri
Fanci
Rbbp9
G3bp1
Atg101
Arrdc4
Dolpp1
Oxr1
Hyal2
Dgat2
Smarcal1
Uchl3
Ndufb1
Cpsf2
Arl2
Ppp1r13l
Cd3eap
Cfap77
Ttf1
Inava
Rps29
Srxn1
Trir
Get3
Mlst8
Mbnl2
Sp1
Abtb2
Kctd2
Atp5h
Mat2a
Slbp
Nmral1
Stx16
Zfp748
Map7d1
Prkag2
Papss2
Dnm2
Frat1
Cnot1
Ska2
Prr11
Flad1
Uqcrq
Gdf9
Uqcrh
Lrrc41
Gzmm
Tmem260
Traf2
Hdac1
Col9a1
Pkia
Vmn2r4
2310039H08Rik
Ly6g6f
Abhd16a
Frat2
Atp5b
Hap1
Kdm6b
Fgd4
C1qtnf6
Tada3
Arpc4
Tbc1d17
Akt1s1
Smg8
Tst
Mpst
Nfe2
Ndst2
Sema3b
Atp8a1
Phldb1
Tpbg
Srek1ip1
Cwc27
Abhd2
Atg16l2
Polg
Wasf1
Cdc40
Sox5
Apela
Bzw1
Sigmar1
Ppm1l
Hexim1
Ankar
Fbh1
Ankrd16
Tsc22d1
Csf2ra
Nol8
Cenpp
Utp18
Mbtd1
Ablim1
Fzd2
Myl12a
Limch1
Dab1
Lrpprc
Mrpl21
Ighmbp2
Dchs2
Tmem102
Fgf11
Chrnb1
Mtmr14
Cnot3
Pik3r3
Cpa5
Zfp143
Tcp11l2
Uba1
Syn1
Osbp
Zdhhc5
Selenow
Wwox
BC005537
Ankrd54
Nfatc2ip
Psip1
Rnf130
Ppp6r3
Frmd6
Cic
Dcps
Lsg1
Stt3a
Ets2
Eif2ak3
Slc35g3
Polr2a
Wasf2
Ttll7
Slc35e3
Dffb
Cep104
Elmo2
Cct5
Atpsckmt
Sema4d
Rlbp1
Zfp691
Ube2b
Cdkl3
Pip4k2b
Plekhf2
Nemf
Rtkn
Top2a
Zfp637
Proser1
Nhlrc3
Selenop
Mgrn1
Cbr3
Ogfod1
Nudt21
Tle3
Smim38
Zbtb18
Id2
Ap3m2
Sorbs2
Cdt1
Rara
Fus
Zfp574
Grik5
Chchd2
Ndufs7
Kxd1
Fkbp8
Cemip2
Tnrc6b
Noct
Adpgk
Znhit1
Plod3
Ltbp4
Rptor
Ncbp2
0610012G03Rik
Spire1
Rtkn2
Robo1
Rmnd5a
Cobll1
Cul2
Nudt2
Kif24
Myl12b
Ngdn
Tmem198b
Dnajc14
Ube2a
Mocs3
Dpm1
Cyp2u1
Clip3
Calml3
Sphk1
Smc3
Rab4b
Mia
Opa3
Ephb2
Gpsm2
Slc4a2
Cdk5
Gng3
Bscl2
Wrap53
Trp53
Irf2bp2
Tnrc18
Ncaph
Nf2
Arvcf
9230019H11Rik
Scx
Trim50
Chrm1
Zfp219
Tmem253
Glrx5
Wipf1
Rhobtb3
Otogl
Nfatc1
Col9a3
Pnmal2
Ss18l1
Psma7
Fos
Phldb2
Rab34
Proca1
Atf7
Rhbdd3
Ewsr1
Rcc2
Pabpn1
Zfp654
Cggbp1
Ppdpf
Rnf5
Agpat1
Camta1
Swsap1
Adgra2
Inka1
Fdft1
Lrrc75b
Tmem242
Npas4
Unc13c
Sort1
Efna4
Hnrnpc
Magi1
Lars
Tom1l2
Drc3
Lrch4
Fbxo24
Dcaf7
Mon1b
Med25
Fuz
Wrnip1
Mtss1
Me1
Rnaseh2a
Prdx2
Syvn1
Rab11b
Zfyve21
Xrcc3
Mapre3
Ss18
Prickle1
Arap1
Zfp580
Ccdc106
Stip1
Cdc25c
Smim17
C1d
Marcksl1
Akap8l
Crebrf
Pitpnm1
Cdk2ap2
Zmat2
Smg9
1700034J05Rik
Tns2
Cep41
Rbm5
Tex14
Kif1b
Ankfn1
Dap3
Oat
Syt8
Alkbh2
Ung
Kpnb1
Nlk
Got1
Ivd
Pmvk
Irf2bp1
Dhrs3
Plpp2
Ss18l2
Map3k3
Ankhd1
Bcl9
Ppfia3
Lin7b
Prkaa1
Slc25a25
Naif1
Bcl6
Evi5l
Mrpl44
Zfp180
Tedc1
Crip1
Trub2
Rcl1
Pcx
Wdr70
Igsf9b
Atp5e
Ccdc33
Hmgcs1
Rgmb
Gfra1
Rab8a
Nectin3
Psma8
Rhoj
Prpf40a
Arl6ip6
Fyn
Junb
S1pr2
Ypel4
Nek6
Scamp1
Ube2c
Prkaca
Cdca8
9930104L06Rik
Znhit3
Sel1l
Gripap1
Atp5g1
Gatad2a
B4galt7
Pdk2
Pcid2
Cul4a
Dok7
Vdr
Frmd5
Maneal
Zfp687
Pde6d
Cops7b
Sox6
Agpat4
Kcnk2
Mis12
Derl2
Wfikkn2
Gjb2
Pygo2
Pnn
Spag7
Kctd14
Tomm40
Khsrp
Tcf12
Tspan4
Polr2l
Arhgef40
Hnrnpl
Enah
Arhgef1
Abhd18
Nol6
Copz1
Mvk
Mmab
Tbcb
Polr2i
Ovol3
4930558K02Rik
Spag8
Hint2
Ggct
Tmem198
Chpf
Rplp0
Pwwp2a
Sin3a
Ndufs4
Dhx30
Tpcn1
Iqcd
Il25
Cmtm5
Selenoh
Pacs2
Fbxl14
Meis1
Katnb1
Tmx2
Med19
Tgfb3
Ift43
Bcl9l
Creb3l2
Per2
Veph1
Plod2
Ugdh
Stat5b
Mapk6
Cpt1c
Gli3
Cdo1
Ift140
Cramp1l
Erp27
Nynrin
Ncald
Mtss2
Ccser2
Tmem218
Zfp869
Mdm2
Pin1
Mrpl1
Mrpl30
Mitd1
Calcoco1
Gm51425
Get4
Chadl
Aanat
Zfp513
Kansl2
Klhl20
Zfp101
Psd
Fbxl15
Nap1l4
Tmem160
Slc46a3
Vps50
Hepacam2
Otub2
Hmgcll1
Leprot
Plxna3
Pgd
Agrn
Magel2
Kmt5c
Col9a2
Ttc41
Hsp90b1
Lekr1
Erg
Eef2
Gfpt1
Erf
Rab40c
Anp32e
Myh10
Arid1a
Taf12
Dynll1
Ttc30b
Fgfrl1
Dstyk
Smtn
Cdca7l
Med23
Tctn2
3110082I17Rik
Opa1
Timm17b
Pqbp1
Cyth2
Tmem262
Vps51
Ddx19b
Aars
Zswim3
Nup133
Acot8
Ankzf1
Tle2
Enpp2
Ssrp1
P2rx3
Eif5
Eapp
Slc2a1
Rgs3
Bbx
Fam110a
Tjp2
Sptlc2
Fmnl2
Tac1
Mfsd8
Phf12
Cabcoco1
Cnn3
Nup93
Plekhb1
Zswim4
Baz2a
Drg2
Yipf2
Timm29
Gins2
Phb
Bcas3
Tomm22
Plin1
D16Ertd472e
Tspan33
1700029P11Rik
Pan2
Wnk4
Ensa
Gnas
Pcdh1
Nr6a1
Kat6b
Dhx35
Art4
Dcaf11
Actg1
Angptl1
Ift81
Rtn3
Qrich1
Tcerg1
Fkbp3
Fancm
Gm5165
Palb2
Dctn5
Rnf26
Srp68
Tma16
Rbm27
Slc26a1
Tdrkh
Elf1
Mrps10
Dnttip2
Pp2d1
Bckdk
Sdsl
Sds
Inip
Ap2a1
Mro
Srpk2
Ptpn14
Tomm70a
Lancl2
Pradc1
Cct7
Gid4
Vmn1r2
Uvssa
Usf3
Mettl11b
Rel
Mrpl39
Atxn7l2
Acsf3
Yif1a
Tmem151a
Amhr2
Saxo1
Mlec
Lima1
Pwwp3a
Pnpla6
Cyth1
Fxyd3
Prrg4
Slc14a1
Nedd4
Slc35a3
Tatdn3
Nsl1
Dgcr8
Zfp335
Ermn
Kcnj16
Elavl2
Cntrl
Cdk5rap3
Neurl2
Ctsa
Tsku
Zfp646
Zfp668
Ibtk
Denr
Jag2
Gnai2
Kmt2a
Itgb4
Lrrc56
Hras
Igsf8
Ajuba
Slc14a2
Sec14l1
Cdk12
Wdr77
Atp5pb
1700016H13Rik
Rps27l
Phlda3
Fam20b
Myadm
Rbm25
Crebzf
Mtf2
Tecpr1
Pa2g4
Lfng
Cenpu
Smim4
Nt5dc2
Evpl
Ttll10
Nt5c3
Rpl27
Ilf2
Zmynd8
Tmem41b
Spsb3
Nubp2
Plekha1
Gjc3
Dhx32
Fstl3
Arhgef4
Zfp821
Zscan25
Oacyl
Niban2
Cytl1
Aig1
Sh2d5
Tmem250-ps
Fam149b
Ecd
Lemd1
Rin2
Plekhh2
Sh3kbp1
Sfi1
Cltc
Rbm39
Sgms1
Styxl1
Mdh2
Clasp2
Ttc14
Spc25
Rab21
G6pc2
Susd6
Klk11
Klk10
Zcchc14
Fam227b
Dtwd1
Isy1
Nacc2
Clic4
Spty2d1
Vwa1
Slc30a5
Fam89a
Anln
9530077C05Rik
Kremen1
Gstp2
Cwc22
Eif4a3
Arhgap19
Fam110b
Klhl21
Cst6
Limk2
Fbxo9
Cilk1
Jun
Gm5591
Aph1b
Mllt11
Cdc42se1
Trim41
Wdr27
1600012H06Rik
Srgap2
Fam72a
Letm1
Hexa
Fam83b
Ireb2
Mrps31
Tmem94
Crybg1
Wnt10b
Med30
Fam3c
Slc29a1
Mymx
Haspin
Dst
Fam204a
Bricd5
Banp
Zfp385b
Glce
Psmd5
Cutal
Hexim2
Zbtb40
Adnp
Parpbp
Nup37
Zfp532
Zxdc
Rasip1
Xpc
Lsm3
Armc1
Chic2
Cct8
Psmb3
Pcgf2
Spns2
Mtus1
Arhgef19
Gm33887
Hspa4
Mapk14
Ube2d3
Fer
Ddx56
Aff1
Fam53b
Ints10
Bbs2
Pou2af1
Hnrnpa2b1
Cbx3
Knl1
Edrf1
Ttyh2
Rpl38
Mtch2
Arf2
Slc26a8
Samd4b
Gmfg
Pmaip1
Usp20
BC005624
Folr2
Slc25a42
Serpinb5
Eea1
Sh3glb2
Miga2
Wdr36
Zfp648
Tpt1
Cgref1
Abhd1
Slc36a4
2900026A02Rik
Fry
Frmd4b
Sncg
Mmrn2
Adssl1
Mfsd13b
Glo1
Cdr2
Sh3bp1
Kif13b
Akap11
Klk9
Dhrs13
Mmp15
Dhx33
Lamp1
Ist1
Zfp386
Malt1
Rraga
Map4k4