ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Sox9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◣ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

T2
Pip5k1c
Iqch
Aagab
Phrf1
Oga
Cmc2
Cenpn
Mia2
Cnot6
Ptcd2
Mrps27
Denr
Flcn
Jag2
Gipc1
Fam53c
Gnai2
Myh14
Rita1
Ddx54
Por
Ankrd13a
Prkdc
Mcm4
Calm3
Taf15
Dut
Akirin1
Lrpprc
Septin11
Asah1
Slbp
Ift27
Cln8
Kctd2
Atp5h
Sash1
Oasl1
Prdm10
Tigd5
Eef1d
Aldh4a1
Cdiptos
Cdipt
Ndufb1
Cpsf2
Kmt2a
Ptov1
Dnmt1
Arntl
Uqcrh
Lrrc41
Madd
Atg12
Ap3s1
Asmt
Arid4a
Prkci
Ptdss1
Mterf3
Ptcd3
Polr1a
Psip1
Eif3b
Dlst
Rmnd5a
Eed
Rpl22
Hdac2
Atg101
Fus
Tmem260
Ppm1l
Rtn3
Uchl3
Arrdc4
Mlst8
Ndst2
Ccdc85c
Tada3
Arpc4
Noct
Fgd4
Sspn
Cenpe
Lrrc56
Hras
Hyal2
Nol8
Cenpp
Sp2
Sod2
Nphp4
Kcnab2
Dohh
Tst
Mpst
Abhd16a
Atrnl1
Pknox1
Cd164
Wasl
Galnt10
Gnb2
Rpn2
Mroh8
Diaph1
BC005537
Map7d1
Polg
Flad1
Rps29
Qrich1
Sec14l1
Pik3r3
Fbxo33
Brd2
Cbr3
Cdk12
Raly
Uros
Lsg1
Bccip
Wdr77
Atp5pb
Rpl19
Ss18
Bcl6
Smc3
Dgat2
Ap2m1
Pkia
Myl12a
Mat2a
Rps27l
Pfdn4
Sharpin
Maf1
Ankrd54
Top2a
Fam227a
Cby1
Zfp219
1700016H13Rik
Mtss2
Ube2b
Ska2
Prr11
Eif2ak3
Rfx1
Arl2
Tcp11l2
Srek1ip1
Cwc27
Rhbdd3
Ewsr1
Fanci
Ephb2
Cd3eap
Bzw1
Fam20b
Srxn1
Paxip1
Mblac1
Bzw2
Ankmy2
Rbm25
Selenow
Cdca7l
Atp6v0c
Rnf5
Get3
Crebzf
Abhd2
Hnrnpc
Dolpp1
Phlda3
Ccser2
Mtf2
Nmral1
Cnot1
Cdt1
Per2
Ttll7
Slc39a3
Tecpr1
Rnasek
Tepsin
Ndufaf8
Dpp9
Pa2g4
Atp5b
Cenpu
Gpr108
Akt2
Robo1
Mtmr14
Rbbp9
Evpl
Tmem218
Ttll10
Pafah1b3
Nt5c3
Tbc1d17
Akt1s1
Rab5b
Cul2
Smim4
Osbp
Dnm2
Cspp1
Cops5
Slc35e2
Rpl27
G3bp1
Them6
Khsrp
Ilf2
Tcerg1
Wasf1
Cdc40
Tmem41b
Spsb3
Nubp2
Zfp869
Inka1
Frat1
Ube2c
Zfp24
Tom1
Plekha1
Paip2b
Tjp2
Dot1l
Mfsd8
Oxr1
Arhgef4
Fbxl14
Frat2
Inip
Cic
Pip4k2b
Zscan25
Sigmar1
Mrpl21
Ighmbp2
Limch1
Aig1
Itgb4
Prpf40a
Nfatc2ip
Fam149b
Ecd
Arl6ip6
Sp1
Atg16l2
Rbbp6
Wwox
Rusc2
Fchsd2
Fkbp3
Sh3kbp1
Camta1
Mrps11
Mrpl46
Rab11b
Cltc
Sfi1
Rbm39
Sgms1
Ankhd1
Hexim1
Styxl1
Mdh2
Cdc25c
Nudt2
Kif24
Rel
Ttc14
Spc25
Rab21
Susd6
Klk10
Cct5
Atpsckmt
Dap3
Mgrn1
Rab28
Uchl1
Zcchc14
Lrch4
Traf2
Isy1
Gm5165
Abhd18
Nacc2
Spty2d1
Slc30a5
Utp18
Mbtd1
Tle3
Zswim4
Mis12
Derl2
Tcp11
Cwc22
Frmd6
Eif4a3
Prkaca
Arhgap19
Nol6
Tnrc6b
Uba1
Med23
Nr6a1
Stip1
Cilk1
Smg8
Git2
Jun
Smarcal1
Zfp687
Katnb1
Kmt5c
Aph1b
Proser1
Nhlrc3
Zfp27
Hdac1
Tctn2
Glrx5
Rbm5
Srgap2
Fam72a
Mdm2
Letm1
Dedd2
Cdca8
9930104L06Rik
Tspan4
Atf7
Ireb2
Mrps31
Cfap77
Atp8a1
Zfyve21
Xrcc3
Pin1
Dbp
Tmem198b
Dnajc14
Zfp748
Med30
Fam3c
Slc29a1
Tacc1
Haspin
Fam204a
Banp
Glce
Psmd5
Evi5l
Hexim2
Pan2
Zbtb40
Adnp
Zxdc
Xpc
Lsm3
Armc1
Nlk
Kpnb1
Cct8
Psmb3
Polr2l
Zdhhc5
Uqcrq
Ppt2
Arhgef19
Hspa4
Mvk
Mmab
Ube2d3
Wdr27
1600012H06Rik
Fer
Ddx56
Mrpl1
C1d
Aff1
Mia
Myl12b
Polr2a
Ints10
Zmynd8
Bbs2
Hnrnpa2b1
Cbx3
Knl1
Mrpl30
Mitd1
Mtch2
Arf2
Mapk14
Ss18l1
Psma7
Fam83b
Samd4b
Gmfg
Pmaip1
Usp20
Mrpl44
BC005624
Ngdn
Slc25a42
Stt3a
Dcps
Meis1
Serpinb5
3110082I17Rik
Eea1
Miga2
Cnot3
Wdr36
Uvssa
Tpt1
Abhd1
Rab40c
Palb2
Dctn5
Slc36a4
Lars
Zfp574
Dffb
Cep104
Mfsd13b
Glo1
Cdr2
Slc25a25
Hmgcs1
Ssrp1
Ttc41
Hsp90b1
Dhrs13
Dhx33
Lamp1
Ist1
Zfp386
Wasf2
Rraga
Ube2a
Emp1
Sgms2
Sppl2a
Rps19
Zfp277
Pnn
Dock4
Tbck
Aimp1
Immp1l
Elp4
Zfp607b
Rgs3
Inava
Micall1
Crtc1
Fut10
Nvl
Fsbp
Rps7
Znhit3
Ift140
Cramp1l
Spata17
Gpatch2
Scn4b
Hbp1
Plekhg1
Got1
Rab33b
Adgrv1
Rnf26
Pou2af1
Chordc1
Znhit1
Tubb4b
Plod3
Copz1
Akap11
Spdl1
Gm51425
Utp3
Wdfy2
Tmem94
Rtkn
Trp53
Met
Dst
Mob1a
Ppp6r3
Kat6b
2900026A02Rik
Sri
Tut4
Commd1
Drg2
Sel1l
Timm17b
Pqbp1
Tfg
Ap2a1
Fdft1
Cd47
Rnf14
Fosl1
Eif3f
Mef2a
Lama4
Dcp1a
Vwa1
Stxbp4
Cox11
Tut1
Nuf2
Fdxr
Nup54
Myo6
Mindy2
Wrap53
Cstf2t
Anapc5
Krr1
Get4
Polr3g
Mblac2
Lancl2
Slc39a10
Mfsd4b4
Snrnp200
1810024B03Rik
Yipf2
Timm29
Ndrg1
Col9a1
Mast2
Mtres1
Nectin3
Bod1l
Anp32e
Chchd2
Gpsm2
Hars2
Hars
Pygo2
Sphk2
Rpl18
Opa1
Uhrf2
Pxmp4
Trib1
Sacm1l
Ube2j2
Gripap1
Kdm4a
Nudcd2
Hmmr
Gbf1
Rptor
Cdyl
Ptger1
Cyth2
Fem1b
Srp19
Exosc4
Chadl
Zfp691
Atp5g1
Zbtb5
Dnajc16
Tanc1
Phldb1
Arid1a
Esyt2
Nedd4
Cipc
Cep63
Anapc13
Ints4
Gatad2a
Slc33a1
Sec14l2
Lrriq3
Fpgt
Zfp143
Kdsr
Pkn3
Ube2f
Rbm15
Syn1
Echdc3
Eapp
Nufip1
Gpalpp1
Kdm4b
Ensa
Ndufs7
Mcm3
Ssbp1
Siah1b
Calcoco1
Map3k3
Birc2
Fubp1
Dnajb4
Nudt13
Galk2
Cops2
Mideas
Map3k7
Smim14
Zfp668
Rgl2
Aanat
Xab2
Pet100
Tmem101
Timm10
Prdx2
Ubald2
Zbtb3
Stat3
Pabpn1
Nucb2
Ric8b
Septin7
Ahctf1
Sun1
Scamp1
Zfp513
Rnase10
Sfpq
Hip1
Zfp180
Tedc1
Srpk2
Polq
Bms1
Ap3m2
Spring1
Rnft2
Kansl2
Mocs3
Dpm1
Jpt2
Kifc5b
Gas7
Zzz3
Zfp654
Vta1
Cggbp1
Get1
Fzd6
Il18
Bco2
F13a1
Cyth1
Dmxl1
Ddost
Hes2
Gtpbp3
Plekhf2
P4hb
Tom1l2
Ss18l2
Drc3
Kansl3
Tiam2
Scamp5
Rps3a1
Fbh1
Ankrd16
Vamp4
St6galnac6
Cops4
Tpbg
Psmb2
Cnot8
Srp68
Rtn4
Creld2
Alg12
Agpat5
Vps51
Syvn1
Egr2
Slc25a45
Kctd9
Cdca2
Tomm40
Klhl20
Zfp101
Snrpc
Opa3
Ppil3
Nif3l1
Htra2
Fra10ac1
Tspyl1
Rrp15
Znrd1as
Znrd1
Ltbp1
Aars
Tmx2
Med19
Fos
Canx
Zfand3
Hdac10
Sarnp
Ormdl2
Ivd
Ddx17
Tma16
Snx12
Cnot11
Pex3
Adat2
Acp2
Rbbp5
A930018P22Rik
Zbtb2
Ap1g1
Ak1
Hsf1
Cgref1
Bop1
Timm22
Prr3
Gnl1
Sox6
Postn
Hap1
Zfp961
Pradc1
Cct7
Calm1
Actr3
Myh10
Ddx41
Hsd17b12
Creb5
Ankfy1
Rpl36al
Mgat2
Lyrm1
Dcun1d3
Nop14
Grk4
Usp2
Pcdh9
Gramd1b
Fzd2
Prcc
Phf12
Sulf1
Cep41
Aox1
B230219D22Rik
Gm6712
Dcaf7
Mest
Faap24
Tulp4
Wdr92
Trim45
Rps6ka5
Pno1
Ibtk
Dad1
Abhd4
Gcnt2
Cflar
Agap1
Ppp6c
Ddx20
Ppp1r11
Tex14
Ctnnd1
Brat1
Srsf7
Ugdh
Cfap298
Txnip
Pcbp2
Mettl25
Ccdc59
Slc43a3
Klhl26
Nbr1
Brca1
Pip4p1
Vps28
Ap4e1
Zfp563
Smarcd2
Unk
B4galt7
Trp53rkb
Top1mt
Mtmr6
Marchf7
Cox7a2
Nelfa
Hnrnpr
Grk5
Fam160a2
Ttbk2
Prickle1
Txnl4b
Mon1b
Dhx38
Luc7l2
Psma8
Panx3
Dnajc24
Herc2
Timeless
Npc2
Isca2
Lsr
Fam187b
Rara
Pdk2
AW549877
Ahcyl2
Ogfod1
Nudt21
Gins2
Cul1
Tcf3
Gm12258
Ift22
Slc25a20
Dus1l
Mlec
Micos10
Fbxl15
Mbnl2
Kifap3
Msmo1
Tmem242
Retsat
Lztfl1
Elmod3
Trub2
Nsfl1c
Nme1
Leng8
Slc35e4
Gne
Trim41
Clcn3
Prepl
Ift46
Camkmt
Gramd2
Arhgap11a
Phb
Msantd4
Lig4
Dok5
Rpp38
Akap8l
Agbl5
Tmem144
Tfcp2
Ints1
Fermt1
Fam76a
Tbcb
Polr2i
Arrdc2
Fbxo31
Nap1l4
Srm
Pcyox1l
Cep135
Cacng2
Taco1
Ncbp3
Dhrs3
Mtg1
Cnot10
Sf3b2
Ppm1b
Mxd4
Mphosph10
Mcee
Xrcc1
Pinlyp
Yars
S100pbp
Rmc1
Set
Rpa2
Cacybp
Prf1
Slc35a3
Rap2a
Rbm27
Cdk5
Zfp472
Trp53rka
Traf7
Rpl26
Qtrt2
Ccdc191
Ndufv1
Gfpt2
Tox4
Rab2b
Ap3s2
Ect2
Cox18
Sox5
Tas2r134
Rbm34
Dusp12
Hint2
Mark4
Ing3
Wdr25
Wars
Sptlc2
Mrs2
Supt4a
Mdc1
Gpn3
Fam216a
Cpsf1
C330007P06Rik
Zfp560
Rnpc3
Sugct
Prnp
Prn
Mplkip
Slc35b1
Naa35
Rrm1
Mapkapk5
Atp5g2
Pabpc4
Mrpl39
Ggct
Snrpd3
Gucd1
Ppdpf
Fuz
Pigm
Bcl9l
Sec22b
Hnrnpl
Cbx5
Tube1
Ost4
Flywch1
Fam229b
Edrf1
Zcchc2
Gm973
Adrm1
Tcf12
Pole2
Mettl18
BC055324
Ankrd11
Prmt5
Ppp4r3b
Crem
1110051M20Rik
Pank1
C030006K11Rik
Alg14
Pafah2
Ndufb6
Magi1
Sgcd
Mre11a
Ing4
Ankrd49
Awat2
Sdhaf1
Ptrhd1
Cenpo
Yju2
Plod2