ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◣ HDAC4: STRING

CLDN2
MTRNR2L2
MSH3
DHFR
MTRNR2L1
MTRNR2L8
SPATC1L
DUX4
HDAC9
RGPD2
RGPD1
FRG2C
FRMPD4
ADAMTSL1
SP2
CABCOCO1
ARID5B
FRG2
COL23A1
MTRNR2L9
KATNB1
TNFRSF19
H4C15
H4C14
ZBTB38
EVI5L
CCDC90B
POLR3F
DZANK1
SSBP1
H4C3
H1-6
PCM1
SF3A3
EMILIN2
MTRNR2L10
SLC25A20
DNM2
RBBP5
PPP5D1
CALM3
FNDC3A
CIC
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
TEPSIN
NDUFAF8
KHSRP
SCNM1
LYSMD1
DDX23
GBA
SP1
RFX1
YJU2
CLPB
TOP2A
MRPL24
PAFAH2
RPAIN
NUP88
NAV3
BOD1
SLC8A1
VPS50
HEPACAM2
IARS2
BPNT1
ATP6V1G1
EPS15
PSPN
ALKBH7
UNK
H3-3B
H4C11
UBE2J1
TACO1
INO80C
TMEM115
H4C12
CALCOCO1
SLC25A25
INTS1
SYT7
PRR14
DDX49
COPE
GLIPR1L1
CAPS2
PTEN
KLLN
CCL3
CHMP4B
INTS10
HNRNPUL1
ARHGAP17
TCEA2
MYOM2
FEM1A
AURKAIP1
IFRD2
CSDE1
TBL1X
RWDD1
SF3B6
FAM228B
EHF
PHF19
PHF12
H2BC4
H2AC6
TOMM40L
APOA2
GSPT1
ARHGEF2
FBXL19
BRWD1
TSN
AP2S1
TRAPPC9
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TMEM107
KLHL29
H4C2
H3C2
IRF2BP2
MAPKAPK5
LSG1
DENND1B
COMMD1
CCT4
ARHGEF1
NDUFS3
KBTBD4
RHOT2
SMARCD2
SELENOH
NLK
LARS1
OSBP
MTOR
GALM
PHB
NUF2
FAP
WDPCP
TSNAXIP1
THRAP3
RANBP10
MDH1
FAM168A
ZNF687
TSSC4
TJP3
BANP
SIX1
PROSER3
PEX14
HSPB6
DFFA
SIRT4
TRIP10
PNKP
GPR108
ZC3H10
RPL41
PRCC
MMACHC
CCL3L3
CCL3L1
CCDC163
RPS20
MAMDC2
AK2
MDM2
ENPP4
CLIC5
PRRG2
NOSIP
PPRC1
ARID2
ACTL6A
KLF2
ID3
GCLC
SSR3
NUDCD1
NCLN
CALR3
C19orf44
BAHCC1
SUCLG1
LNPEP
ATP2C1
NEBL
KLF6
TMEM256
NLGN2
DHX8
ST3GAL2
HIKESHI
PWWP2A
ZFYVE1
SSBP2
HEXIM2
TOM1L2
OR4M1
FUT10
DRC3
SCT
PAK1IP1
CDHR5
C6orf52
TSC2
RAP2B
PRDM15
NTHL1
CCL5
ANKHD1-EIF4EBP3
ANKHD1
TRIP4
ORMDL3
GTPBP6
USHBP1
BABAM1
SMCO1
NAIF1
CXCR5
MRPS18C
HELQ
HCAR3
TMEM208
RAB11B
LTN1
LRRC29
DPP9
CCDC39
RAB5B
PANK4
OR4Q3
HES5
FLAD1
BMF
SPSB3
LRCH4
FBXO24
INVS
ERP44
PPP1R12B
ZNF17
SMPD3
MDM4
COX16
CCDC146
UCKL1
RAG2
ILF2
IFTAP
COMMD9
CCM2
XAB2
UBE2H
RPL27
PCP2
VIPAS39
NCOA7
KANSL3
FER1L5
AHSA1
TJP1
RUFY3
NDC80
METTL4
HNRNPC
ZNF417
SNX16
RPS3
TBC1D10B
MYLPF
C1orf198
PEMT
H4C4
PIGL
NCOR1
ZPBP2
USP3
SPAAR
RGS8
IKZF3
HRCT1
PES1
ID1
SP5
SKA2
PRR11
ING4
DRAP1
C11orf68
CSNK1G3
WHAMM
FSD2
CHST12
C16orf91
BBX
KMT2C
HOOK1
PNKD
MED23
COMMD2
CCAR2
C8orf58
AAMP
STIP1
SLC35B1
NGB
NAT16
NUP107
BUB1B
SLC33A1
PIN4
GATB
EMILIN1
CMSS1
BIN2
NDUFS7
KRR1
GPR137
EML2
ZNF268
MRPS23
LRRC14B
NOP16
HIGD2A
FMO4
AQR
ZNF608
MNT
FGG
USP30
POLG
STX16
C2orf42
SRSF11
LRRC40
KHDC4
HSD11B1
CNIH4
SNX17
LIME1
INSR
EIF2B4
ZFPL1
TMEM262
CDCA5
ANP32C
SATB1
LEFTY2
FAAP24
CEP89
ZNF140
SYMPK
FOXA3
TPST1
IFIT1
TP63
CCDC77
WBP1L
DDX41
COPS7A
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
C19orf53
WDR74
TMEM70
ELOC
ZNF451
WAPL
TMEM242
GALK2
CP
COPS2
TYK2
PSMD4
KDSR
TMEM109
TLR5
TIMM22
STAP2
SMARCE1
RAD51AP1
PRPF19
NR1H2
MPND
EPYC
CCDC200
C12orf4
RPS7
RPL35A
PRPF18
IQCG
GSK3A
TUT1
SPTLC3
KIF16B
ZNF609
TTI2
MED27
INTS9
HMBOX1
EXOC3L1
EPRS1
E2F4
CCNL1
ZNF211
RPL32
CYCS
ZNF384
TFPT
RAP2A
PRPF31
CRB1
C16orf72
NEDD8-MDP1
NEDD8
KIF22
GMPR2
DYNC1I2
COPZ1
CCR2
ARNTL
ZMYND8
SLC39A1
SCAMP4
RCAN1
RAD51AP2
NOC4L
DDX51
CRTC2
ADAT3
PPP6R1
TBL1XR1
OCSTAMP
MYCBP2
LTA4H
DMAC1
ZNF547
ZCCHC4
TRAPPC2B
RBM28
MTRF1
MFAP3L
ATP5MC2
TSC1
TDRKH
SCAF1
RRAS
RAB40B
GFI1B
ZNF225
SSBP3
RABL2A
GTF2H4
DHX16
ZSWIM3
TMTC3
SEC11C
NPIPB5
KLHL20
CLEC7A
CEP290
ACOT8
STK25
PLCD3
DPEP3
COX7C
ACBD4
ZC3H12A
UNC93B1
STOML2
SPHK2
RPL18
RANBP2
FAM83E
NUDT13
NDUFB5
MRPL47
HAX1
ERVMER34-1
P2RY10
OXCT2
GUF1
GORAB
CYP2R1
CRYAA
CRYAA2
TULP2
SMARCAL1
NUCB1
ZNF165
UBQLN4
TLDC2
STAM
LAMTOR2
CAND1
TBP
SH3GL1
PSMB6
PSMB1
NDUFAF5
METTL26
ESF1
CHAF1A
ZBTB45
WDR46
PSAP
PFDN6
EMX1
ECT2
BUB3
ZCCHC8
VARS1
UBE2I
TOMM40
TFB2M
TCERG1
RGS3
KCNN3
H4C5
H2BC7
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
MEIS1
CHD6
ZMAT2
VRK1
SMG8
RPS6KB2
METTL3
KMT2B
FCF1
CLPTM1L
AREL1
TOR1AIP2
TOR1AIP1
STBD1
PPP1R37
OAZ3
NUP205
MRPL9
KBTBD6
GPR89A
GOLPH3L
FAM207A
ADRM1
TIMM21
SHPK
PPP1R12C
PNPLA6
PLEKHM3
NSMCE3
ITGB1BP1
IFT27
FBXO15
EMC4
CTNS
CPSF3
ZBTB5
TMEM218
SLC35E2B
LCOR
GTF3C3
CDC23
ARL1
TTC21A
TNFRSF17
PSENEN
NPIPB2
LIN37
GSTO2
GORASP1
GABPB2
AP3S2
ANAPC5
ZNF628
TRDMT1
TNFRSF12A
THOC6
SMARCA4
PHB2
MYNN
HEMK1
HCFC1R1
GSR
CRYBB1
C3orf18
ACTRT3
ZFYVE19
VWA5A
STK17B
SOD1
NPRL2
MRPL28
DNAJC17
CYB561D2
C12orf43
ZSCAN22
ZNF605
SACM1L
KRT15
TBL3
SLC26A8
NR6A1
MAPK14
UTP3
TM4SF18
NCBP2AS2
NCBP2
MITD1
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
MRPL53
LYZL2
JMJD4
FMO1
ABT1
RNF43
MICOS13
LOC102723996
ICOSLG
HSD11B1L
ZNF286A
WIPF1
UFD1
NFIB
MRPS15
DMAP1
CDC45
AHCYL2
ZMPSTE24
VPS25
UBR2
THADA
RPL37
NUCKS1
MAPKAPK2
ISOC2
FRYL
CTU1
CDK5RAP2
CCDC61
BTN3A2
TAS2R38
POLR2J3
POLDIP3
NR1D1
FBXO8
FAM184A
CEP44
ATP5F1B
UBE2T
TAF3
PCDH1
NDUFAF1
GTF2H2C
GTF2H2C_2
DNAJC14
DCP1A
ATP5MG
ZNF383
ZNF337
PSMD11
NFKBIL1
LOC101927572
EIF4A3
DDX39B
CCNC
ATP6V1G2
ALKBH6
UTS2R
PGP
OPA3
NOXA1
MORC3
HARBI1
GGCT
DAPK3
BRICD5
ATG13
ZSCAN32
ZNF174
SEL1L
LY9
EIF4A2
RPL26
PDE12
LRRC45
CENPX
CCDC174
UBAC1
TPD52L2
PRICKLE4
KAT7
INTS4
IDH2
FRS3
AP2M1
ABHD16B
TDP2
TATDN3
RPS27
RPL15
RER1
RAB13
PEX3
NSL1
NKIRAS1
MORN1
GOSR2
FLT3LG
FARSB
ADAT2
ACOT13
TRAPPC6A
TLR4
SRI
FDXR
CA11
BLOC1S3
ABI1
ZC3HC1
UFSP2
UCHL5
TRNAU1AP
TMEM94
TIPRL
RO60
KLHDC10
KDM4D
KAT6A
CWC15
C4orf47
RPL14
PTDSS2
PSMD5
PLEKHA8
MLLT1
KNL1
KCNH1
CCL4L2
CCL4
RBSN
RABEP1
UTP11
TSACC
RARB
FBXO38
CCT3
C1orf159
RALGPS2
RAB5C
RAB11A
FAM187A
EFTUD2
CRADD
CD2BP2
CCDC103
ZNF500
SUFU
SPRY1
NMT1
GOT1
FASTKD1
DCAKD
ACTR1A
ZNF830
ZNF776
VPS72
TRAF3IP3
TIMMDC1
NOL6
MKNK2
MIS18A
G3BP1
CCT6B
AHCY
VPS26C
SLC39A3
SEC13
RPS23
DCAF7
ATP6AP1L
ALG10B
TLE3
SPATS2
NMNAT1
LZIC
GRK6
ATP5MC1
ZNF444
SMG6
SIRT2
NFKBIB
NAV1
CLN3
APOBR
ZSWIM4
SAMD4B
LOC645177
FBXO11
C12orf77
STT3A
SART3
PXMP4
KCTD5
ISCU
DSTYK
DLGAP1
CNOT1
VCPIP1
HHLA2
CASP8AP2
C8orf44-SGK3
ZC3H6
SYNGR4
SLX4IP
RUNX2
MKKS
EPS8
PDE6D
P4HB
NME1-NME2
NME1
NFATC2IP
MRPS17
HEXB
DOLPP1
COPS7B
ATF7IP
TRMT10C
TRAPPC6B
TRAPPC3
TMEM60
STK17A
SMAD3
POLR3E
PNN
PHTF2
NSUN4
MAP1LC3B2
KRT23
IGSF8
EXD2
COX7A2L
CCNI
XRCC4
TSNAX
TMEM167A
SETD1A
RFX5
PHF1
H4C9
TBC1D19
PRDM10
MT2A
WDR24
TMEM259
RPL18A
NOTCH1
NIP7
HEXA
ETV5
COG8
CNN2
CFAP100
BARHL1
ZNF143
THOC5
NRTN
NCKAP1L
LMAN2
FBXW11
CD69
C19orf67
PSMD3
CEACAM21
RIC1
REEP6
PRPF8
PIP5K1A
PCSK4
FBXO40
CDK5RAP3
TRAF7
SUPT7L
SLC4A1AP
RUVBL1
DOCK8
CYP19A1
API5
ANKRD39
TPGS1
RGS9
EXOC4
XRCC5
VEZT
TADA1
SNX15
MTMR9
FGD6
UFC1
SUPV3L1
SUGP1
SNX1
RPIA
MED18
MAU2
LAX1
H4C8
CIAO2A
ACTR2
ZNF235
LRRC8A
KYAT1
CTDP1
HDGFL2
EMCN
AP3B1
ZNF26
STPG3
OAT
NELFB
MRPL27
HUS1
FAM117A
EME1
BUB1
ZNHIT2
NR4A1
MRPL21
MRPL20
IGHMBP2
FAU
ATG5
ZNF420
TSKS
TRUB2
RUBCN
RNF224
RNF208
CYSRT1
COQ4
AP2A1
THAP1
RBM25
TMX2
TAOK3
SUDS3
RNF121
RBM42
PARP8
MRM3
MED19
LOC100133315
GLOD4
EIF3F
SUZ12
SCYL3
RGS1
MYEOV
FAM160A2
CNGA4
ZNF688
ZMIZ1
CDCA8
C1orf109
ZNF669
ZNF226
SRD5A1
SCRIB
MRPL1
ERCC1
KDM4B