ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

WDR74
ZBTB4
POLR2A
POLDIP3
TRPC1
HEXIM1
C12orf65
ZNF143
GTF2A1
DNAJA1
APTX
NUDT15
SLC38A2
MCL1
BTG1
HSP90AB1
KDM4A
PARP2
H4C3
RPLP0
SRSF7
EIF4G2
PCIF1
ID4
EIF2AK3
DNAJB1
RPL5
FUS
SRSF3
PABPC1
NARF
GLUL
LRCH4
HERPUD1
FBXO24
ZBTB37
GSK3B
H4C11
TGOLN2
HNRNPH1
SPTAN1
CIRBP
PRDX1
H3C6
CSRNP2
H1-2
CALM1
KANSL2
CSKMT
C11orf98
IMMT
CCN2
TRA2B
CLSPN
PNRC2
SRSF5
TRAF7
RPL3
TMBIM6
UBE2S
SIRT4
KNTC1
OAZ1
HNRNPA2B1
CBX3
MKNK2
MYLIP
FOS
ARL15
SNRNP70
VCL
AFF1
NAGK
JUNB
FSCN1
ARF4
ANKRD17
CCN1
SETD5
RPL13A
SESN2
MICU2
DUSP1
ZFAND5
VPS26C
SECISBP2
RPS12
POLR3D
HSPA5
TTI2
FAM168B
RPL12
PRKRA
PJVK
LRSAM1
JPT1
HSPA1B
CYTH2
SRSF6
DENND6A
DDX5
IER5L
FAM53C
CDC25C
KDSR
MTHFD2
H2AX
SRSF2
MFSD11
H3-3B
TOB1
SFPQ
HEATR5A
CSE1L
ADAMTS1
UBE2Z
ZNFX1
UBC
PFKFB3
NXF1
ZNF529
TUFT1
ACTL6A
IER5
CALR
HEXIM2
SOCS1
ARL6IP1
SKP1
TRA2A
MAT2B
NDRG1
DDX59
COQ10B
VAMP1
ZCWPW1
RPLP1
MEPCE
ID2
DNAJC25-GNG10
DNAJC25
CTNNB1
JUND
TAF8
MRPS18B
TMEM18
USP42
SREK1
NUDCD1
H2AZ1
UBR4
TMEM258
NASP
KRT19
FEN1
C12orf57
KMT2E
L3HYPDH
JKAMP
S100A13
CHTOP
H4C12
RPS2
MAK16
EEF1A1
DDX1
SIRT1
TNFAIP1
KLF7
IFT20
HNRNPC
BRD2
ARRDC3
UBB
TJP1
SDCBP
KAT7
EEF2
ZNF207
TAF1D
TAF15
CHMP4A
C11orf54
OAT
MAPK1IP1L
H4C15
H4C14
H2AC19
H2AC18
CLTC
LUC7L
DHPS
CALM2
SLC39A10
NABP1
JUN
IFRD1
DDIT3
AMD1
USPL1
HMGB1
MORF4L1
KIF27
RHOB
GADD45B
MAT2A
UBE2D3
HDAC4
RBM14-RBM4
RBM14
ZNF524
TM2D1
PDIA3
LGMN
FIZ1
TMSB4X
ZSCAN31
PGAP2
RPS20
EIF4A2
WDR1
TAX1BP3
EMC6
EMSY
FAM3C
WSB1
BAIAP2
GNAS
ZNF248
PPIA
POR
PITRM1
LBH
SLC3A2
SEPTIN2
RRBP1
INTS6
HDLBP
H2BC17
H2AC17
H1-10
CENPBD1
BAMBI
H2BC21
H2AC20
ING1
FTL
CYP20A1
RPS27
C5orf24
USP48
PPIL3
NIF3L1
CENPC
ATF4
HSPA8
FER
PARK7
SMIM14
GPR89B
DNAJB5
STK17A
GADD45G
TMEM242
LIMS1
RBM7
CREBZF
C11orf71
ACTB
FN1
PCNA
GAPDH
YWHAQ
TUBB4B
SERTAD2
H2BC15
H2AC15
SLC35C2
PLAG1
CHCHD7
TNRC6B
ARIH1
AMOTL2
YTHDC1
PLK2
H3C2
GTPBP8
EIF5
ARSD
RBM12
LUZP1
CPNE1
SARAF
WAC
UBAP2
PPP1R15A
HNRNPA1
CBX5
ARHGEF7
ZNF326
STMN1
LUC7L3
ISCA1
EIF1
ATXN7L2
TSC22D1
THAP5
P4HA1
HNRNPAB
DNAJB9
RCC1
IL6ST
AKIRIN2
H2BC8
H2AC8
JMJD1C
TSPYL2
TMEM263
RUSF1
MAP3K2
ERRFI1
TPI1
SLC7A5
SDHAF2
CPSF7
ARHGAP35
UAP1
UHRF1BP1L
CAMSAP2
PIK3R3
ZNF24
SLC16A1
RBM25
MPP5
FRS2
FAM200B
EHD1
DDX50
FDXACB1
C11orf1
TP53BP2
RPL41
NREP
FEM1C
PTPN14
POMZP3
KIF5B
ACSL3
DAB2
HNRNPA0
CELSR3
NFKBIZ
SPTSSA
PAIP2
GPATCH3
CCNG1
ARHGAP19
H2BC11
H2AC11
S100A1
CNN3
H4C4
H2BC12
H2AC12
CDK12
CCT2
DESI2
USO1
H2AC21
CCNT2
C19orf48
MMADHC
H2BC5
H1-4
IVNS1ABP
TUBA1C
USP40
POLR2J3
PDCD4
AZIN1
MRTFA
HMGA1
ZC3H6
NBEAL1
MATR3
H3C15
H3C14
CCNB2
ATL2
HMGN2
SLX1B
SLX1A
NFYC
NDEL1
ETNK1
BOLA2-SMG1P6
BOLA2B
BOLA2
ZNF766
PIK3C2A
KLHDC2
ABI2
TXNRD1
TMSB10
SFR1
SLC36A4
SLTM
SLC20A1
TSC22D2
H4C5
PHACTR2
TPT1
HNRNPDL
ID1
SDCBP2
MKLN1
CLU
KRT8
XBP1
RPS6
LSM14A
EXT1
ZNF518A
RPN1
RNF220
ITFG2
ELMOD2
SKIL
PRKAB2
CHD1L
MTRNR2L2
PMEPA1
COPS8
SERPINE1
TGIF1
RBPJ
TUBG1
RETREG3
IL20
MTRNR2L8
DLX3
RNF103
COL7A1
FBRS
NODAL
CCDC92
SPACA6
ZNF148
GAB1
TRIB1
FSTL3
TTC39B
SMAD7
TNFRSF12A
OTUD7B
CMTM6
IKZF5
ACADSB
PRRG2
NOSIP
ME3
OLFM2
MTIF2
THEM4
PPP1R12B
PPP1R13L
POLR1G
ICAM2
INSYN2A
BRD7
STAM2
TOGARAM1
KLHL28
ABLIM1
KCTD11
RICTOR
CCPG1
C15orf65
PAX6
RASGRP3
LEFTY1
FAM172A
NFKBIL1
ATP6V1G2
MYADM
FMN1
SNX25
SMARCD3
CST6
EP400
MMP10
CCDC33
PSMD2
CENPA
CTCF
PEDS1-UBE2V1
PEDS1
GNB2
PELO
ITGA1
EPB41
ZNF341
CAV1
FGF8
KCNN3
TMTC4
PLK3
FLRT2
DGAT2
SNX18
ZNF571
ZNF540
DHRS3
LAMB3
STOX2
DERL3
ALDH18A1
TAGLN2
COQ8B
TECR
MRPL2
KLC4
DISP1
LRRC2
TRIOBP
RRM1
CCDC88A
WBP1L
CAPS2
NPFFR2
CHRNA9
TMCO2
BRAP
ACAD10
SLC25A25
NAIF1
INPP4B
BMPR2
ACOX3
SERTAD4
CER1
WDR36
BET1
SIAH1
NFIC
CLCF1
ELAPOR2
LAMC2
DCAF10
MFNG
SLC35F2
ILKAP
ZFR
KMT2A
AHCYL1
SLC39A13
LRRC37A3
CXCR5
ZNF592
KLF10
PSKH1
FAM118A
VWA5B2
ZNRF3
ZNF609
SERPINB8
ITPRIP
MTHFD1L
LUC7L2
LEMD3
NOL4L
LOC100287896
LIPT2
DNAJB4
CSF2RB
PANK2
KLRD1
LPCAT3
BRIX1
VDAC1
CNOT1
SPON2
MACIR
GATAD1
SLC46A3
KAT6A
METTL11B
RNF223
CDKN2AIP
SP4
PGK1
CPT2
ZNF655
MARCHF5
CPEB3
AXL
HSD17B8
MAP2K3
PRMT5
DDAH1
UBE2B
CDKL3
TFPI
IL17B
LAPTM5
SLC1A4
LENG8
UPK3BL2
ZZZ3
TBC1D7-LOC100130357
TBC1D7
ASB8
POLD4
S100A2
KRT80
LOX
GPR183
EPSTI1
AMPD3
ZBED2
NOTCH3
DENND2B
KCNF1
FCHSD2
CPNE2
ARHGAP24
WWC2
VOPP1
CD8A
ACSS3
FOXJ3
CXADR
BLOC1S2
JCAD
VDAC2
MYOM1
KRTAP21-3
GAS2L1
LRP12
SLC2A14
PRRT2
UQCRB
GTF2B
IL6
LRP6
SOWAHC
SEPTIN10
UPK3BL1
NUF2
MLLT11
CDC42SE1
OVCA2
NTMT1
IFRD2
BEST3
SGK1
REV3L
DRAP1
C11orf68
NEDD4L
MRI1
PCK2
RET
PAWR
AQP3
PLEC
KANSL1L
PITPNM3
DST
EIF4E
BEGAIN
PURA
SLC38A9
SHKBP1
MDC1
MINPP1
ZNF354A
SLC25A45
MED23
GEMIN7
RNF11
AGBL2
CCNI
ZSWIM4
ZNF641
CHST11
DOCK9
ALOX5AP
PPP2R2A
NEDD9
MTF2
DSTYK
TTLL8
MTRNR2L9
MIXL1
PRC1
ARHGAP28
FLNC
CTNNA1
AGXT2
PIM1
ENOX1
B4GALT7
SNX14
F13A1
RCAN3
PARL
USP53
SEC24B
TTC9
SREBF1
PPP6R1
LARS2
UBE2D2
GRIA4
P2RY2
KPNA7
BUD13
SLCO5A1
PAFAH1B1
DNAJB14
E2F3
ZBTB45
SH2D7
ZNF853
NPAS4
NFAT5
RRM2B
NR2C2
NIBAN2
TRDMT1
TP53TG5
SLC44A1
DECR1
RHOBTB2
BPTF
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ANGPT2
ZNF165
DENR
ADGRF2
ZSWIM7
TTC19
RNF213
NOCT
TIPARP
TEAD4
LMO4
KMT5B
BHLHE40
MAST2
CDC37L1
RNF32
GNAL
ADAM19
USP22
TTF1
ATAD2
MIPOL1
GUCA2A
NINJ1
HNRNPD
CDHR3
ZNF664-RFLNA
ZNF664
STAT5B
MAP7
LDLRAD4
TNPO1
RAI1
BMP8B
SEMA3E
XPO1
CALD1
VANGL2
IL21R
FAM184A
R3HDML
MROH6
RUNX1
HERPUD2
RBMS1
SNX16
MARCHF3
KANK1
QPCT
UNKL
GRIK2
CREB5
CHN1
YOD1
SSBP2
SPRR1B
CSF1R
USP30
SYT14
SLC35E1
RCOR3
RCBTB2
NDRG2
MOB4
TTC6
FOXA1
TMEM184A
TFF1
OCIAD2
PSRC1
ACTBL2
CPA4
TDGF1
BMP8A
CYB561
ARIH2
RNFT1
ZNF48
SH3BP4
PXK
KBTBD2
PCID2
FABP6
CUL4A
RAD23A
GNL2
ZRSR2
MSANTD3
MRPL38
DNAJC28
DCP1A
ZNF587B
TNFSF4
SYN2
UROD
SLC19A2
HNRNPR
HECTD3
FERMT1
UBN2
NOTCH2NLC
ADGRG1
TM6SF1
ESM1
C2CD2
ZSCAN22
PALLD
FBXL13
CYP3A5
ARMC10
TCTEX1D4
RXRG
CCDC50
ACOT7
PTGS2
PSMD10
ATG4A
ZNF713
TLE2
FLVCR2
TMIE
TBC1D5
RPL24
ALS2CL
STK40
PTPRD
NR1H3
NDUFAB1
DNAJB2
ACP2
GBA
TRAK1
RWDD1
CLSTN1
ANKRD46
SMAP1
RCL1
LIMK2
CDK5RAP2
RIN1
PDPR
PCSK1
OBSL1
NSUN6
INHA
KRT16
KRAS
ARID5B
PMAIP1
HPCAL1
CCDC7
APOL3
UCKL1
MET
LAMA3
EML1
RAPH1
PTEN
PCCA
KLLN
TBX22
PLPPR3
KTN1
AASDH
THRB
RGPD8
RGPD6
RGPD5
BOD1L1
PNMA1
PKHD1L1
SLC7A6
RABEP1
LRRC59
HRH1
ZBTB5
UBAC1
PAXBP1
MAML3
STX4
RAPGEF2
PTPN18
DDN
WDFY1
UBXN8
PCDHAC1
GRM1
SYTL2
RELA
DNAJC6
ARL4A
IL13RA1
C3orf52
BCL9L
UBE2F
NUTF2
CENPT
ZFYVE16
SMIM8
ZNF34
LOC107986453
GATAD2B
FILIP1L
COPS7B
CKM
ADPGK
SERPINB6
RUNX1T1
HOXA2
ACSM4
UBL4A
RAB23
BAZ2A
ZNF521
JAM2
GPR180
PDE2A
DMPK
VIM
LDHA
TRMU
PPP1R14B
NUAK1
NCOA3
FAM168A
RAD54L2
HTR5A
HINT3
CCDC9B
USP47
SNX30
NDST1
MDFI
DMXL2
NR1D1
NFIA
FBXL12
ASCC3
ZC3H7B
SLC34A2
SDHAF1
RANGAP1
MYLK3
LGR5
ARAP2
KRTAP2-4
IL17RD
FGF1
DLC1
KDM1A
SRF
MARCHF4
JDP2
FAM162A
CCDC58
C4orf36