ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957411 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◣ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

TUBG1
RETREG3
IL20
TGIF1
SIRT1
PAX6
RBPJ
DLX3
BRD7
ME3
MYADM
ALDH18A1
TRIB1
PEDS1-UBE2V1
PEDS1
FMN1
CCDC33
RNF103
TTC39B
ICAM2
RASGRP3
PELO
ITGA1
DISP1
ILKAP
CMTM6
TNRC6B
PPP1R12B
CHRNA9
PSMD2
GAB1
LRRC2
LUC7L2
TMCO2
KLRD1
LAMB3
CTCF
GATAD1
OTUD7B
ZFR
FAM118A
IKZF5
ACADSB
FLRT2
DDAH1
SERTAD4
SLC35F2
KCNN3
SLC1A4
ZNRF3
IVNS1ABP
TOGARAM1
KLHL28
VWA5B2
AMPD3
DENND2B
ABLIM1
PSKH1
KRTAP21-3
SERPINE1
TMTC4
NFIC
COQ8B
AHCYL1
ZNF571
ZNF540
CSF2RB
SPON2
SGK1
TFPI
RRM1
MFNG
SKIL
BEGAIN
WDR36
ZBED2
SHKBP1
MINPP1
TMEM263
PRMT5
SIAH1
THEM4
ARHGAP24
MMP10
PIM1
ENOX1
CENPA
SLC25A25
NAIF1
COL7A1
SLC46A3
SERPINB8
RICTOR
FAM172A
NR2C2
CXADR
DERL3
CCPG1
C15orf65
MAST2
PRRT2
NINJ1
MRPL2
KLC4
STAT5B
SNX25
AGBL2
LOX
JCAD
BET1
CREB5
CHN1
CPNE2
NTMT1
PSRC1
BRIX1
VOPP1
DNAJC28
BRAP
ACAD10
PANK2
TNFSF4
CDKN2AIP
TM6SF1
SP4
ESM1
C2CD2
CYP3A5
TNFRSF12A
PSMD10
ATG4A
FCHSD2
INSYN2A
NDUFAB1
FSTL3
TRAK1
UQCRB
PCSK1
DOCK9
DNAJB14
NEDD9
ZBTB5
PAXBP1
SEC24B
METTL11B
RAPGEF2
DDN
UBXN8
SYTL2
MACIR
SH2D7
IL6
PRKAB2
CHD1L
LENG8
SERPINB6
SMAD7
SARAF
TRMU
CCDC9B
SNX30
DMXL2
DNAJB1
TECR
COPS8
SLC2A14
ITPRIP
NEDD4
GRIA4
CYP19A1
CYP2S1
DEPP1
NODAL
EPB41
GTF2B
UBL3
KDM5C
KANSL1L
TMEM183B
XPO1
ZFAND2B
CNOT1
TMC7
PLEKHA8
ZNF592
NOL4L
CPT2
UNKL
RGS4
KDSR
PPP1R13L
POLR1G
CDC37L1
SULT2B1
RNF44
SYT14
PRSS23
DNAJB4
TRUB2
COQ4
ZZZ3
ZNF225
ZNF821
VMAC
NDUFA11
C1QTNF7
PTPRD
ZDHHC22
HINFP
TBL1X
DACT1
RCAN3
TAS2R10
NCKAP5
SPATA6L
SETD6
PLPP6
GRAMD2B
FAM104A
RNFT1
SLC41A2
PMEPA1
ALOX5AP
WBP1L
PRRC2B
CCDC30
PCIF1
CCDC88A
BEST3
KIAA1217
CWC22
ASB8
PBXIP1
NKD1
GRHL3
SPACA6
SLC39A13
RHOBTB2
TBC1D7-LOC100130357
TBC1D7
ZNF76
FDXACB1
C11orf1
BUB1
ARPP19
TRIM69
KCTD11
KDM1A
VDAC2
MED21
USPL1
HMGB1
WWC2
MNX1
MGST1
METTL21C
NDUFS5
TMEM126B
DLG2
EP400
MYLK3
KMT2A
RNF214
PCSK7
CLDN2
RPL24
MTRNR2L2
MTRNR2L8
ID1
FBRS
CCDC92
ZNF148
PRRG2
NOSIP
OLFM2
MTIF2
STAM2
LEFTY1
NFKBIL1
ATP6V1G2
SMARCD3
CST6
GNB2
ZNF341
CAV1
FGF8
BAMBI
PLK3
JMJD1C
DGAT2
SNX18
DHRS3
STOX2
TAGLN2
UAP1
TRIOBP
CAPS2
NPFFR2
ZBTB4
POLR2A
INPP4B
BMPR2
ACOX3
CER1
CLCF1
ELAPOR2
LAMC2
DCAF10
H2BC11
H2AC11
LRRC37A3
CXCR5
KLF10
CTNNB1
CALM1
H2BC21
H2AC20
ZNF609
MTHFD1L
LEMD3
LOC100287896
LIPT2
LPCAT3
VDAC1
KAT6A
SRSF6
RNF223
PGK1
ZNF655
MARCHF5
CPEB3
AXL
HSD17B8
MAP2K3
UBE2B
CDKL3
WDR74
IL17B
LAPTM5
UPK3BL2
GADD45G
POLD4
S100A2
KRT80
GPR183
EPSTI1
NOTCH3
KCNF1
CD8A
ACSS3
FOXJ3
BLOC1S2
CCN2
MYOM1
GAS2L1
CLTC
LRP12
HNRNPA2B1
CBX3
HSP90AB1
LRP6
AFF1
SOWAHC
SEPTIN10
UPK3BL1
CALM2
NUF2
MLLT11
CDC42SE1
OVCA2
IFRD2
CCN1
REV3L
DRAP1
C11orf68
NEDD4L
MRI1
PCK2
RET
PAWR
AQP3
PLEC
PITPNM3
DST
EIF4E
PURA
SLC38A9
MDC1
ZNF354A
PRDX1
ERRFI1
SLC25A45
MED23
GEMIN7
RNF11
H2AX
CCNI
ZSWIM4
ZNF641
CHST11
H4C11
PPP2R2A
MTF2
ZC3H6
DSTYK
TTLL8
MTRNR2L9
MIXL1
PRC1
ARHGAP28
FLNC
H4C12
CTNNA1
AGXT2
POLDIP3
RHOB
B4GALT7
SETD5
SNX14
F13A1
ATXN7L2
PARL
USP53
USP42
TTC9
SREBF1
PPP6R1
LARS2
HEXIM2
UBE2D2
P2RY2
KPNA7
BUD13
SLCO5A1
PAFAH1B1
CSKMT
C11orf98
E2F3
ZBTB45
TRPC1
FEM1C
ZNF853
NPAS4
NFAT5
RRM2B
NIBAN2
ARL6IP1
TRDMT1
TP53TG5
SLC44A1
DECR1
HEXIM1
BPTF
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CSRNP2
C12orf65
ANGPT2
ZNF165
DENR
ADGRF2
ZSWIM7
TTC19
SLC20A1
RNF213
GADD45B
SRSF2
MFSD11
SRSF5
NOCT
TIPARP
TEAD4
LMO4
KMT5B
ZNF143
MTHFD2
BHLHE40
GTF2A1
KMT2E
SKP1
RNF32
GNAL
ADAM19
USP22
TTF1
ATAD2
MIPOL1
GUCA2A
HNRNPD
CDHR3
ZNF664-RFLNA
ZNF664
DNAJA1
APTX
GNAS
MAP7
LDLRAD4
TNPO1
RAI1
BMP8B
SEMA3E
CAMSAP2
NUDT15
CALD1
ACSL3
VANGL2
SLC38A2
IL21R
FAM184A
R3HDML
VAMP1
MROH6
RUNX1
LSM14A
MCL1
HERPUD2
BTG1
RBMS1
SNX16
PIK3R3
MARCHF3
KANK1
TMEM242
QPCT
PARK7
GRIK2
YOD1
UBE2Z
SSBP2
SPRR1B
KDM4A
CSF1R
USP30
SLC35E1
RCOR3
MAT2A
RCBTB2
TMSB4X
NDRG2
MOB4
TTC6
PARP2
FOXA1
H4C3
RPLP0
ATL2
TMEM184A
TFF1
SRSF7
OCIAD2
DESI2
ACTBL2
HMGN2
CPA4
ARIH1
TDGF1
STK17A
JUND
BMP8A
EIF4G2
AMOTL2
ID4
CYB561
ARIH2
EIF2AK3
ZNF48
SH3BP4
PXK
KBTBD2
PCID2
FABP6
CUL4A
RAD23A
GNL2
ZRSR2
MSANTD3
MRPL38
DCP1A
ZNF587B
SYN2
UROD
SLC19A2
HNRNPR
HECTD3
FN1
FERMT1
UBN2
RPL5
NOTCH2NLC
ADGRG1
FUS
ZSCAN22
SRSF3
PALLD
PABPC1
NARF
GLUL
FBXL13
ARMC10
TCTEX1D4
RXRG
CCDC50
ACOT7
PTGS2
LRCH4
LIMS1
HERPUD1
FBXO24
ZNF713
TLE2
FLVCR2
ZBTB37
GSK3B
TMIE
TBC1D5
ALS2CL
STK40
NR1H3
DNAJB2
ACP2
GBA
RWDD1
CLSTN1
ANKRD46
TGOLN2
SMAP1
RCL1
LIMK2
HNRNPH1
SPTAN1
CIRBP
CDK5RAP2
RIN1
PDPR
PHACTR2
OBSL1
NSUN6
INHA
H3C6
KRT16
KRAS
H1-2
ARID5B
PMAIP1
HPCAL1
CCDC7
APOL3
UCKL1
MET
LAMA3
KANSL2
EML1
RAPH1
PTEN
PCCA
KLLN
TBX22
PLPPR3
KTN1
IMMT
AASDH
THRB
RGPD8
RGPD6
RGPD5
BOD1L1
TRA2B
PNMA1
PKHD1L1
CLSPN
SLC7A6
RABEP1
PNRC2
LRRC59
HRH1
UBAC1
MAML3
TRAF7
STX4
RPL3
TMBIM6
PTPN18
WDFY1
UBE2S
SIRT4
PCDHAC1
KNTC1
GRM1
RELA
OAZ1
DNAJC6
ARL4A
MKNK2
IL13RA1
C3orf52
BCL9L
UBE2F
NUTF2
MYLIP
KRT8
FOS
CENPT
ARL15
ZFYVE16
SNRNP70
SMIM8
ZNF34
LOC107986453
GATAD2B
FILIP1L
COPS7B
CKM
ADPGK
VCL
RUNX1T1
HOXA2
ACSM4
UBL4A
RAB23
BAZ2A
ZNF521
NAGK
JUNB
JAM2
GPR180
FSCN1
ARF4
ANKRD17
RPL13A
PDE2A
DMPK
VIM
SESN2
MICU2
LDHA
DUSP1
ZFAND5
VPS26C
SECISBP2
PPP1R14B
NUAK1
NCOA3
FAM168A
RPS12
RAD54L2
POLR3D
HTR5A
HSPA5
HINT3
USP47
TTI2
NDST1
MDFI
FAM168B
RPL12
PRKRA
PJVK
NR1D1
NFIA
LRSAM1
JPT1
HSPA1B
FBXL12
CYTH2
ASCC3
ZC3H7B
SLC34A2
SDHAF1
RANGAP1
LGR5
DENND6A
DDX5
ARAP2
SFR1
KRTAP2-4
IL17RD
FGF1
DLC1
IER5L
FAM53C
CDC25C
SRF
MARCHF4
JDP2
FAM162A
CCDC58
C4orf36
SPAG9
H3-3B
GPR68
XKR7
TOB1
SFPQ
PCDHGC5
HEATR5A
CSE1L
USP15
POLE3
KHK
C9orf43
AMOTL1
XPO5
TSPAN12
TRMT112
PRND
PRDX5
POLH
ADAMTS1
ZNFX1
UBC
PPT1
PFKFB3
NYAP1
NXF1
GTF2H2C_2
GTF2H2
ZNF529
TUFT1
REEP5
ACTL6A
SERP1
S100A10
RSU1
LARP1
IER5
EIF2A
CALR
SOCS1
TRA2A
SAR1B
MAT2B
BDH1
REST
NDRG1
MFSD12
DDX59
COQ10B
C9orf40
ZCWPW1
RPLP1
MTDH
MEPCE
KDM5B
ID2
DNAJC25-GNG10
DNAJC25
TAF8
SYNJ1
SLC24A2
RRP8
MTRNR2L6
MRPS18B
MRPL39
ILK
CSRNP1
TMEM18
TMEM121B
MFAP3L
FAM227B
DTWD1
SREK1
SMPD4
NUDCD1
MZT2B
MECOM
H2AZ1
GLT1D1
APOBEC3D
ANKRD18A
USP37
UBR4
TMEM258
SYT12
SH3BGR
NASP
KRT19
IFT52
GSN
FEN1
CNOT9
CLDN4
C12orf57
ATP2A2
SYNRG
PBX2
NRSN1
L3HYPDH
KIT
JKAMP
IQSEC3
HDDC2
ERLEC1
ASB3
SFT2D3
S100A13
GGT7
E2F2
CHTOP
ZNF839
TLCD5
RPS2
MMP24OS
MMP24-AS1-EDEM2
MCOLN1
MAK16
IGF2BP3
EEF1A1
DDX1
TNFAIP1
NMRAL1
KLF7
IFT20
HNRNPC
HMOX2
FRA10AC1
ELF2
EIF2B2
CHST13
BRD2
ARRDC3
UBB
TJP1
SLC4A2
SELENOO
SDCBP
RFESD
PPCDC
PIGO
NCOA5
MEX3B
KAT7
EEF2
CDK5
CCNH
ZNF207
TRIP10
TAF1D
TAF15
PSMD14
GLRA3
CHMP4A
CDKN2AIPNL
C11orf54
AVPR1B
APOBEC3F
AGO3
RBP5
PTBP2
OAT
MAPK1IP1L
H4C15
H4C14
H2AC19
H2AC18
GCNT1
ENKUR
CRBN
TMEM250
SHF
MICALCL
LUC7L
DHPS
CEMIP2
ZNF518A
SRI
SLC39A10
SLC25A51
NABP1
MNAT1
JUN
IFRD1
HEXB
DDIT3
CPVL
AMD1
ZNF764
TCEAL8
LOC728392
CORO6
CLDN6
TMEM215
RTN4
RNF6
MORF4L1
KIF27
KCNMA1
ERMP1
UBE2D3
HDAC4
RBM14-RBM4
RBM14
LRCH1
KLHL18
KIF9