ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
NODAL
CCDC92
FGF8
PRKAB2
CHD1L
CAV1
SNX18
STOX2
COPS8
SKIL
ZNF148
ID1
LEFTY1
FBRS
MTRNR2L2
BMPR2
SPACA6
GAS2L1
STAM2
NPFFR2
MRI1
MTRNR2L8
OLFM2
KLF10
ZSWIM4
CHST11
PPP2R2A
LARS2
BUD13
ZNF853
NPAS4
ZSWIM7
TTC19
NOCT
RNF32
LRRC37A3
KAT6A
NEDD4L
FOXJ3
NOTCH3
MAP7
LDLRAD4
LRP6
DRAP1
C11orf68
MTIF2
MLLT11
CDC42SE1
CALD1
FAM184A
MARCHF3
CD8A
NUF2
GRIK2
MARCHF5
CPEB3
CER1
RCBTB2
JMJD1C
GAB1
DST
CYB561
DCAF10
EP400
USPL1
HMGB1
MTHFD1L
GNL2
CCDC88A
NOTCH2NLC
GNB2
ABLIM1
CCDC50
BAMBI
PTGS2
PCK2
TBC1D5
UAP1
RET
ANKRD46
SMAP1
NSUN6
MIPOL1
SNX14
E2F3
PMAIP1
EML1
RAPH1
PCCA
AFF1
TBX22
PLPPR3
RGPD8
RGPD6
RGPD5
BOD1L1
PNMA1
LRRC59
WWC2
MAML3
TEAD4
PTPN18
WDFY1
PCDHAC1
GRM1
ZNF609
DNAJC6
ARL4A
C3orf52
SLC20A1
ZFYVE16
SMIM8
KANSL1L
VANGL2
COPS7B
DGAT2
RAB23
BAZ2A
ATXN7L2
ZNF521
GPR180
P2RY2
NCOA3
FAM168A
IKZF5
ACADSB
HTR5A
HINT3
FEM1C
USP47
RCAN3
TRDMT1
NFIA
FBXL12
ASCC3
ZC3H7B
RANGAP1
LEMD3
LOC100287896
LIPT2
LSM14A
SRF
MARCHF4
JDP2
FAM162A
CCDC58
C4orf36
RNF213
XKR7
SOWAHC
SEPTIN10
SLCO5A1
USP15
POLE3
KHK
C9orf43
AMOTL1
MTRNR2L9
PARL
OCIAD2
XPO5
TSPAN12
POLH
PPT1
GTF2H2C_2
GTF2H2
REEP5
GADD45G
FDXACB1
C11orf1
SAR1B
REST
C9orf40
LPCAT3
PRC1
MTDH
KDM5B
LRP12
SYNJ1
RRP8
MRPL39
ILK
TMEM121B
MFAP3L
FAM227B
DTWD1
SMPD4
MZT2B
ANKRD18A
RNF103
USP37
IFT52
CNOT9
NRSN1
IQSEC3
ERLEC1
ASB3
GGT7
E2F2
ARHGAP28
ZNF839
TLCD5
MMP24OS
MMP24-AS1-EDEM2
MCOLN1
IGF2BP3
TTC39B
ZNF341
ZBTB45
TNPO1
NMRAL1
HMOX2
FRA10AC1
EIF2B2
CHST13
RFESD
PIGO
NCOA5
MEX3B
CCNH
GLRA3
CDKN2AIPNL
AVPR1B
AGO3
RNF11
PTBP2
CRBN
BPTF
TMEM250
SHF
CEMIP2
MOB4
PXK
MNAT1
HEXB
CPVL
TCEAL8
LOC728392
CLDN6
TMEM215
RTN4
RNF6
ERMP1
SLC44A1
DCP1A
ACSL3
RWDD1
LRCH1
KLHL18
KIF9
EXD1
CPNE4
CHP1
CTNNB1
TBPL1
GARS1
DDIT4
WBP1L
USP42
UBE2D2
ZNF395
ZNF197
SPSB2
MYO6
EXOC2
ERI1
CBWD5
CBWD3
ZNF664-RFLNA
ZNF664
CAMSAP2
TMEM132A
STX16
PDE1C
LAYN
GRM2
CCNL1
SPATA18
POLR3E
KIAA1841
MRPL2
KLC4
SOCS2
OXTR
AK3
BRIX1
USP53
RPGR
PPIH
OPRM1
MANEA
FOSL2
FXR1
ERBIN
ARHGAP26
MDC1
ZDHHC23
ZCWPW2
SMIM10L1
PRH1-TAS2R14
FNBP1L
AZI2
CAPS2
HSP90AB1
XYLB
VPS28
SEC22A
HTR1E
ELMO1
CERCAM
LAMC2
HMGN2
NTSR2
KLF17
BICD1
ZNF641
NDRG2
OSBP2
HECTD1
GTF2H2C
ARHGEF40
AAR2
PIK3R3
MRPL38
GABRG3
HEXIM2
TMEM170A
SLC24A1
MRM3
ITGB1
INTS14
GLOD4
AKAP12
ZNF354A
GADD45B
KBTBD2
PDE8A
HDAC2
EYA3
CFAP161
C12orf73
DESI2
FABP6
NCBP3
MAP2K1
LIG4
EIF4G1
CDC42EP3
B3GLCT
ATP23
ABHD13
EFHD1
CPLX2
PRDX1
TTC9
HERPUD2
ZFHX3
ULK2
NANOG
MSRB2
MEIG1
MAPK15
KATNA1
IFNGR1
HABP4
FAM120B
ELK4
DNAJC10
CCPG1
C15orf65
ZNF654
WNT5A
GNAI2
CGGBP1
PRMT5
UCHL1
PRMT9
PHIP
NUDCD3
NIT2
KIFC3
FCHO2
VDAC1
ATAD2
PLEKHM3
PDE8B
NXPE3
NAALAD2
KCNH5
GGH
FYN
CCDC107
CBWD6
AMFR
ZNF165
TMX3
SEC62
METTL2A
MCM7
CCDC102B
C12orf42
AP4M1
AKAP9
MED23
USP22
LIMK2
TUT7
SDHA
RIPK4
PET117
MTARC2
KAT14
DHRS13
CYP2R1
CHIC2
CCDC127
DHRS3
ARL6IP1
GNAS
THAP4
IQCH
EPCAM
BTC
ATG4B
AAGAB
UBE2B
CDKL3
TRIM9
SLC35E2B
RUSC2
RMDN2
NOTCH2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MTF2
ZC3H6
MDFIC
L1TD1
GTF3C3
CLTC
ZNF860
XRRA1
TGFA
SPCS2
PRUNE2
PRKAA1
OSBPL10
MKX
FAM151B
EXOC6B
ANKK1
CCNI
RUBCN
LRRC37B
FYTTD1
DMRTA1
AMPH
CDC37L1
SLC39A6
RNF224
GATAD2B
UCHL5
TEKT3
RO60
MBOAT2
INKA1
TMEM242
ZNF48
SYN2
TOR2A
RTKN2
PROSER1
PHTF1
PABPC5
NHLRC3
FAM222B
ANKRD12
TEFM
TBL1XR1
STX18
RIMBP2
PLCH1
NRSN2
FAM177A1
ATP5MPL
GNAL
TRIAP1
RBM15B
PDE4DIP
MMP2
PLK3
DSTYK
PARK7
TPD52
SKA3
RPTOR
MRPL57
KLHL23
FGFBP3
DNAJC3
IL20
PHACTR2
FILIP1L
RAD54L2
TMEM267
SPEF2
NDUFS3
KBTBD4
DCP1B
ADAMTS3
RBPJ
TAF12
SPAST
SLC44A2
SLC30A5
NLE1
DNAJC19
CYP2U1
CCDC71L
ANKRD50
UROD
HECTD3
SPOP
SLC35A3
NOTCH2NLA
MTMR6
METTL9
FAM98B
DYRK3
C8orf37
TMEM263
SUMF2
FAM221A
EXD2
EEF1AKMT1
EBAG9
CALB1
ASAP3
AFF4
KTN1
STMN3
SNAPC5
SIK2
NFKBIA
MAP3K4
FAM107A
ADNP
PURA
TIPARP
HNRNPR
HCN1
BLMH
AMN1
CALM2
TMEM37
STEAP3
PAK1
NAA40
KANSL3
HTR7
GNG3
FUT1
CRYBG1
CNTN4
CDKN2A
CCDC69
BSCL2
ATAD2B
AFG3L2
ARIH1
SST
SEPSECS
NAT8L
KCNQ3
DDHD1
PAWR
RBMS1
MND1
FUT8
TGIF1
PPP1R13L
POLR1G
AMOTL2
NR1H3
ACP2
LYRM1
KCNH1
DCUN1D3
C15orf40
RCOR2
INTS12
HIPK1
GSTCD
GAREM1
CTSL
VDAC2
CCN2
SERPING1
RNF166
CTU2
RCL1
SEMA6A
PLCL2
PLAAT1
PAFAH1B2
NOTCH2NLB
METTL2B
LONP2
FAM83B
ARID2
ABCC11
SSBP2
STK17A
VPS18
VGLL3
TSKU
TPK1
TJP3
THOC2
SYDE2
SEC11A
MRPL40
HIRA
GEMIN4
GAD2
CCKBR
AS3MT
HNRNPA2B1
CBX3
SLC35E1
TTC14
POT1
MEF2A
MAP2
FBXO10
EIF3A
CHST15
BAZ2B
STK32C
LRRC27
HS3ST2
FOXN3
CNTNAP3
CACHD1
AP3B1
CALM1
HNRNPD
UBN2
PKN2
IL11
MAT2A
ZBTB2
UAP1L1
TAP1
SPAG1
PSMB9
NCKAP1
MPHOSPH8
CCDC59
CABIN1
ELF2
ZNF846
ZDHHC1
TTC23L
TRMT6
TCF12
SMAD3
RBP1
RBM47
PTPN4
MCM8
FERMT2
ASB13
ARL5A
ADRA1B
ADAMTS18
TMTC4
SYT14
ACOT7
TTLL7
TCTE3
PDLIM5
LSM5
GCLM
FOSL1
ERMARD
AVL9
PSMF1
NSUN7
IPO13
HES6
DHRS4L2
DHRS4
CARNMT1
SNX25
RRM1
NUAK1
SMPDL3A
RB1
RANBP2
FBXO22
DTD2
ATXN2L
ARHGEF1
PCID2
CUL4A
USP3
STXBP5L
HBS1L
FRMPD1
LDHA
VPS36
SNTG2
RWDD2A
RAB11FIP3
PGM3
MB21D2
MAP4K5
KANSL1
FZD1
ATL1
POLD4
USP30
THRB
TATDN2
SPRYD7
GPHN
C8orf88
AGPS
IFRD2
SPATC1L
KIF21A
HECTD2
FBP1
ACOXL
TCF4
RBIS
IL17RA
CORO2A
BARD1
TRAPPC11
RWDD4
MMUT
IKZF3
FGF9
COMMD8
CENPQ
JAM2
ELAVL2
OTUD7B
ZSCAN22
SUGCT
ORC5
MPLKIP
LOC101928764
KCTD18
LIMS1
GBA
LOC107986453
ZCCHC18
SSH2
PRLHR
PIK3C2B
PATZ1
EFCAB5
YARS1
TLCD4-RWDD3
TLCD4
S100PBP
PSIP1
PIGH
OTUD4
FAM174B
SRSF5
ZNF280C
WTAP
UQCRC1
SUPV3L1
SOD2
SDE2
NUP153
KATNIP
GTF3C1
GALNT3
EFCAB14
COG2
ZNF594
MKS1
IPP
FGD4
DENND4B
TIMP4
LNPEP
FEZ2
ATR
ASAH1
URB2
TAF5L
SIDT2
FGFR4
CCN1
NEIL2
FSIP2
FBN2
BBS12
MIXL1
APCDD1
UBE2Z
SLC25A51
WDHD1
TDRKH
SOCS4
PCMTD1
EFR3B
PSMD14
PTBP3
PPP1R14A
ZNF518A
SEMA3C
SCN9A
RSPO2
PPM1D
ICE2
DTNA
CNTNAP5
C14orf39
OXR1
EREG
STK32A
SOCS5
PLPP5
PDCD6IP
HCFC2
GLT8D2
CRH
ARHGAP42
RNF7
JAK2
TMEM222
ROPN1
ZC3H8
GPT2
SYNPO2
SF3A3
NKX2-6
SYNGR2
MYL12B
TM7SF3
PRDM1
CYREN
ZNF397
PSMB2
ADAM19
PTP4A1
C17orf64
SIRT1
SERPINE1
TUBG1
RETREG3
DLX3
COL7A1
TRIB1
FSTL3
SMAD7
TNFRSF12A
CMTM6
PRRG2
NOSIP
ME3
THEM4
PPP1R12B
ICAM2
INSYN2A
BRD7
TOGARAM1
KLHL28
KCTD11
RICTOR
KDSR
PAX6
RASGRP3
FAM172A
NFKBIL1
ATP6V1G2
MYADM
FMN1
DNAJB1
SMARCD3
CST6
MMP10
CCDC33
PSMD2
CENPA
CTCF
PEDS1-UBE2V1
PEDS1
PELO
ITGA1
TNRC6B
EPB41
KCNN3
IVNS1ABP
FLRT2
ZNF571
ZNF540
LAMB3
DERL3
ALDH18A1
TAGLN2
COQ8B
TECR
DISP1
LRRC2
TRIOBP
CHRNA9
TMCO2
ZBTB4
POLR2A
BRAP
ACAD10
SLC25A25
NAIF1
INPP4B
ACOX3
SERTAD4
SARAF
WDR36
BET1
SIAH1
NFIC
CLCF1
ELAPOR2
MFNG
H2BC11
H2AC11
SLC35F2
ILKAP
ZFR
KMT2A
AHCYL1
SLC39A13
CXCR5
ZNF592
PSKH1
FAM118A
H2BC21
H2AC20
VWA5B2
ZNRF3
SERPINB8
ITPRIP
LUC7L2
NOL4L
DNAJB4
CSF2RB
PANK2
KLRD1
CNOT1
SPON2
MACIR
GATAD1
SLC46A3
SRSF6
METTL11B
RNF223
CDKN2AIP
SP4
PGK1
CPT2
ZNF655
AXL
HSD17B8
MAP2K3
DDAH1
TFPI
WDR74
IL17B
LAPTM5
SLC1A4
LENG8
UPK3BL2
ZZZ3
TBC1D7-LOC100130357
TBC1D7
ASB8
S100A2
KRT80
LOX
GPR183
EPSTI1
AMPD3
ZBED2
DENND2B
KCNF1
FCHSD2
CPNE2
ARHGAP24
VOPP1