ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
MSH3
DHFR
ARID3B
HEXA
FRG2C
MTRNR2L8
LAMP1
ENTPD4
WASHC2A
WASHC2C
FRG2
PDGFB
MTRNR2L1
AP5Z1
TMCC3
MEOX1
ERCC1
TRIL
SPATA25
NEURL2
CTSA
TNC
CORO7
TNNC2
SNX21
DUX4
MSS51
ZNF668
CLCN7
ANGPTL4
WBP1L
CELA3B
ARID5B
MACC1
RGMB
C1QTNF1
COL23A1
AFAP1
CSNK2A3
KCNMA1
KLHL41
SUMF1
TMEM91
ZAR1L
BRCA2
THEMIS2
GPSM1
KAT5
STRA6
TMEM239
C20orf141
ARHGAP25
SYNPO
TRMO
STBD1
SLC1A7
IGLL5
PVALEF
AATK
GADD45A
OR51T1
GFRA1
COMMD9
ATP6V0D1
AGRP
CLN3
APOBR
SLC35A5
ATG3
ABCC10
IFNLR1
TGIF1
CLDN5
PYCR1
LTBP1
SULF1
FCRLA
BCAT1
NFIB
BCHE
GBA
SLC8A3
CD82
TNNT1
PRL
FREM1
FOXB2
MYPN
GET4
MYEOV
EPHA2
SPG21
SMYD1
CLIP1
IQSEC1
CYB5R1
UXS1
FHL2
SLC19A3
MYOG
TMEM120B
DOK7
NNAT
BLCAP
TNNI1
MUSTN1
ITIH4
PCBP4
FLCN
EXOC7
CMTM2
HDAC9
TBL1X
HAGH
FAHD1
B3GALT5
UPP1
PALLD
ZNF92
ARL14EP
TMCC2
MYBPC2
VGLL4
ZNF507
TCAF2
ITSN2
AMDHD2
SPAAR
HRCT1
PTPRD
SLC12A3
TES
HERPUD2
TCF4
MFSD1
PAFAH2
DTNA
TMEM205
RAB3D
CCDC159
HPCAL1
SH2D7
PDZRN3
UNKL
ASF1B
NAGPA
RDH5
ITGA7
BLOC1S1
RFTN1
LIMK1
C20orf204
DPYD
CDH7
SLN
RRAGC
SBK2
BCL3
MAP3K7CL
SPNS1
HHIPL2
SMARCD2
VPS33A
MYOD1
HNRNPLL
NDUFA4
HNRNPH2
TBC1D9
KDSR
PTGIS
MYLK4
BAX
LRRC47
NUTM2F
RPS7
CREB5
IL32
EN2
TCF7L2
PRUNE2
ITGB3BP
EFCAB7
LURAP1L
MYCN
RASGRP3
TNRC6B
CNN2
RINL
NES
RYR1
GIT2
ANKRD13A
SEC22B
TNFSF15
TBC1D5
ACTC1
ID3
AGTR2
UBE2Q1
PROM1
TMEM40
SKP2
LMBRD2
SYNPO2L
FLRT3
CYP27C1
CELA3A
SOBP
ANKRD1
KLF3
RMND1
ARMT1
APOC1
TRIM16L
FAM200B
CCN2
TMEM167B
SLC44A1
ALK
HES1
USP2
SVIL
UCHL5
RO60
EZR
KANSL3
FER1L5
NUP50
AMPD3
INTS10
OPRD1
NAV2
ATF3
SSBP1
KDM3A
FGF6
NUDT4B
LBH
S100A2
SLC38A8
OR14A2
BAIAP2
HRH1
BAHCC1
DAPK1
PPP6R1
NUTM2G
MYL5
ATP5ME
MARCHF9
CDK4
ACOT9
MYH7
CDRT4
NNMT
EYA1
MYL12A
SLC25A34
NPEPL1
CRACR2A
ANKK1
MYCL
SH3PXD2A
SPATC1L
PTK6
SRP68
MXRA7
CNN3
ARMCX5-GPRASP2
ARMCX5
CRYGN
TNNT2
NAPA
VSTM2L
CHD3
G2E3
ZBTB18
FGF16
ACVR1
SYNJ2
VTA1
NMBR
SREBF1
RBPJ
MCU
MAST4
ARHGEF2
CNBD2
PHC2
TP53AIP1
SPATS2L
OCLN
MINDY2
NTSR1
WNT1
MSGN1
SEMA3D
PLXNB2
MAPK10
CHST12
INTS12
GSTCD
YARS1
S100PBP
MCOLN1
PRKAG3
SSTR5
TP53BP1
RGS12
RALGDS
SF3B6
FAM228B
TP53I3
CGGBP1
C3orf38
HS1BP3
LRRC17
SYTL2
SERINC2
TLN2
CASP3
NPAS4
USPL1
HMGB1
KANSL1
SYNE3
TBX2
MYO18A
ZCCHC24
SNRPB2
ATP6V1C1
STYXL2
GPA33
PLAU
ZNF335
ABLIM1
LSM12
G6PC3
ERI1
RPA3
TEX46
KDM1A
SUPT7L
SLC4A1AP
ARID5A
IZUMO2
INKA2
COL16A1
CCNG2
CHD2
NUDCD3
SPRED2
ENTPD2
LMF1
SLC1A5
BTG2
SYTL3
CCNO
PPIP5K2
GIN1
CARD16
ABHD2
STK24
MGP
MTBP
MRPL13
ZBTB21
TBC1D19
KLHL12
WSCD1
FSCN1
PCLAF
SERP1
EIF2A
IFNAR2
PPP1R3D
FAM217B
MED18
C1QTNF7
PBK
AMZ1
ARL6IP1
ANXA6
COMMD4
GXYLT2
BMF
UTP3
MAMSTR
DZIP3
CIP2A
SEM1
TMEM131
SOAT2
IGFBP6
ODF2L
RBM43
HOXC13
TACR3
SSBP2
TDRP
C10orf67
LPCAT1
GCK
TNPO3
CASD1
GNA12
EFNA5
ST7
RAD9A
TANK
MTHFD2L
WRN
PURG
OPRL1
LKAAEAR1
CEP162
VPS11
SLF2
TMBIM4
TM4SF4
MDM2
SPRY4
SIX1
NCAM1
VAMP5
HAAO
CLMN
MAB21L3
TRIM62
CCNI
ST3GAL5
ASB18
FIP1L1
PROSER1
NHLRC3
ZNF622
RARA
ATP6V1H
CCDC174
BGN
COX7A2
NBL1
RAP1B
PCBP2
JDP2
C2orf16
ARID2
MAP3K7
NOXO1
GFER
ANKRD12
NUP42
SCAF1
RRAS
PSMA5
THAP1
PIP4P1
MTF2
PSEN2
RPUSD4
FAM118B
CDC42EP3
AZIN1
TBC1D13
IGSF10
SLC4A2
CDK5
MARCHF8
IFFO1
RRP15
CDH11
ZNF32
TPP1
CHMP2B
BIN1
RBM48
PEX1
PHF23
DVL2
PCNX1
AFF1
CCDC9B
KLHL30
ABCC3
ARID1A
WNT10A
WDR11
HSPB2
CRYAB
C11orf52
E2F6
GTF2B
GPX4
CACYBP
GPR146
TEX36
PSME1
FITM1
CAND1
ZADH2
ITPK1
MNAT1
SH3BP4
UVRAG
RRN3
SMAD3
SPATA9
RHOBTB3
RRAD
LRRC58
PPP4R3B
PER1
MUSK
DARS1
TSPAN31
AGAP2
PLEKHS1
NR2E3
GRN
CDK5RAP2
DNTTIP2
DBF4B
MSL2
UBB
SH2B1
RXRG
STAT1
RBMS3
ARHGAP28
PIH1D2
NKAPD1
SF3A3
CHRNG
SEPTIN9
SLC2A10
THAP10
LRRC49
LOC389831
ARMC8
RIMS4
CASQ2
WBP11
MRAP
C12orf60
FANCC
VGLL3
RAPGEF4
NFIA
RPL22L1
AP3S2
KCTD9
CDCA2
ZNF593
C1orf232
SH2D3C
PEX3
ADAT2
NAGLU
THUMPD3
PPM1D
LFNG
RGS3
PALD1
POLR2M
PPCDC
FAM120B
DLL1
DENND2A
RTKN
LOXL1
TTC30A
TUBA1B
ATP6V1G1
N4BP2L2
CCDC146
CCDC200
KCNF1
KRTAP5-3
PFDN4
MTMR9
PLAAT5
MYL12B
DAPK3
MBNL2
EXOSC8
ALG5
OSGEP
APEX1
WASHC5
NSMCE2
INMT
TPM2
WDR5
PNPT1
LOC100421372
HSPA14
ERBB4
CDNF
EVPL
MEF2D
CDC7
ALDOA
IL26
KYAT1
POMZP3
ZNF212
TP53RK
SLC13A3
CCDC15
EFHC1
MPRIP
ERCC6L2
MATR3
HNRNPD
MRPL44
PLEKHD1
JMJD1C
EPS8
TBC1D30
GNS
TSR3
GNPTG
SELENOT
FREM2
ATP6V1E1
RBBP5
ZNF143
THADA
ICA1L
VPS50
HEPACAM2
SLC22A8
ANKRD40
COX16
METTL15
KIF18A
GBX2
SGIP1
NKAP
NUP205
SLC35E2A
LSMEM1
HOXA3
STK36
RNF25
SLC25A26
ZNF644
STXBP5
SLAMF1
ABAT
MTMR14
MOB4
C2orf49
NCKAP5L
POLR3F
DZANK1
NUP107
OTUD7B
TAMM41
TMEM230
MYBPH
ARHGAP24
FMO1
SCAF11
DAB2
WASL
HSD17B11
XRN1
COA7
ARRB1
SETD5
ZNF775
MC2R
COMMD2
TRPM4
HRC
SGO1
KLHL7
INO80C
PIPOX
DCAF10
HSPG2
COMMD1
BEST3
TRIM55
CITED2
HSPB1
KRT80
ZNF397
ATP5F1E
TMF1
FANCD2
USP46
SMARCE1
MEF2C
TRAF4
NUF2
MTERF1
PUM3
MMADHC
SETDB1
KAT6A
RHOJ
LMNA
SLC38A7
NKIRAS1
WDPCP
UBE2H
ZSCAN30
TNFRSF19
ARNT
ZNF684
RPL15
SHPRH
MDH1
PNRC2
FAM240C
TCTE3
ERMARD
CHMP1B
NEXN
ELAPOR2
EPM2A
PLCD4
WARS2
FLT1
TMEM238
HPS5
GTF2H1
RPL27
SATB1
TMEM190
RTN4
FAF1
GPN1
CCDC121
KANSL1L
CRBN
SLC29A2
TTC26
RAB5B
NAV1
STON1-GTF2A1L
PCOTH
MIPEP
CFAP69
NBEA
ZNF830
ZNF343
RESF1
CCT6B
ADNP
MTFR2
ALPL
CEP120
ATP5MC1
TBPL1
C8orf58
ICE2
CCAR2
NOTCH2
TRIM47
ATR
SLC38A2
ZMPSTE24
ZBTB6
DDX5
LTBP4
C3orf14
UBXN2B
CHMP7
EPHA3
ZNF292
RAB11B
TRMT5
SLC38A6
MFN1
DMPK
CYCS
LOC114841035
FKBP2
STX16
THOC1
CXXC5
THAP6
PPP1R14B
ERICH4
DMAC2
EIF4A2
NDE1
MARF1
FDFT1
ANKRD29
C5orf51
PSIP1
ALOX5AP
CCNC
CPED1
PEX2
OGFRL1
PUS10
PEX13
KRR1
TMCO1
CCDC59
SUGT1
SEMA3A
NXT1
LIMCH1
ELOVL6
IPP
DDX20
SRPX2
HFM1
TOMM5
CDC37L1
MEF2A
HBS1L
CALM2
HSPB7
CLCNKA
TM9SF4
LEMD3
VAMP4
KMT5C
KRIT1
ANKIB1
RUNX1
ZCWPW2
AZI2
UCKL1
OPA1
DMTF1
ANKRD50
RFX3
PREPL
ERLIN2
CAMKMT
ALG9
CELF2
HMCN2
NBPF1
ZCCHC3
MICAL3
LRRC74A
TRMT6
MCM8
SPAG8
HINT2
RPS12
HSPE1-MOB4
HSPE1
HSPD1
OXNAD1
DPH3
GNG11
GCLM
SHOC2
BBIP1
ZFAND5
TNFRSF10D
KIAA0754
TESPA1
COL20A1
CNOT2
NUP54
PPFIBP1
HOMEZ
BECN1
AP1AR
RAB11A
RARB
SERPINI1
PDCD10
TMBIM6
MST1
ATG4C
TMIGD3
ADORA3
ZER1
ANKRD18B
MIDEAS
MRPS23
CFLAR
HBP1
SLC35A1
ZNF780A
SERBP1
TYW3
CRYZ
NME1-NME2
NME1
LRP5L
GMNN
SLC33A1
MYL6B
MYL6
DDAH1
CCN1
BMI1
COMMD3-BMI1
COMMD3
TINAGL1
SCN3B
PUSL1
ACAP3
DHX8
ACHE
RBMS1
HIPK1
UFM1
ADGRL2
FRA10AC1
PACRGL
FAM98B
PDAP1
BUD31
STARD4
PHF5A
MAP3K13
LARS2
ACO2
FZD1
COPS4
IRF2BPL
MTRF1L
MYCBP2
SLC24A1
INTS14
ZCRB1
PPHLN1
SULF2
RPL21
PTPN1
IGF2BP3
CDH15
APBB2
RPL5
CLDN12
CBWD5
PVALB
HNRNPDL
GRB10
ENOPH1
CTNNAL1
ETV4
ALLC
NRAS
PRELID3A
SEC14L1
ING3
COX10
TAF13
MAGI3
DUSP6
NDUFV2
SECTM1
AIFM1
PLEKHM3
ZRANB2
PARP2
NDUFAF5
ESF1
PPIG
GLRX
DGLUCY
GPATCH8
RPS6KA5
THAP5
DNAJB9
STARD3NL
NEMF
ANO6
HMGA2
WDR81
BCAR1
LDHB
CSDE1
DLAT
TRIM45
SMG8
PSMC2
EMSY
DNAJC2
MTHFR
CLCN6
YTHDF2
RIN2
STAG1
ATP2A3
SLC35D1
SLC9B2
SCNM1
LYSMD1
NUDCD1
NAA38
USP15
ATP2A1
TOP3A