ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

PRICKLE1
RAE1
PMF1-BGLAP
PMF1
NBPF6
ARID3B
SCGB3A1
APP
KDR
SLC45A4
ZBTB7B
PMM1
DNPEP
ETV4
TM2D2
ADAM9
CALML5
DUX4
PIK3AP1
TENT2
PROP1
LECT2
PEX10
LGALS8
NUDT3
NBPF4
TMEM216
FRMPD1
LAMA3
APBB2
SLC22A10
ACMSD
GALNT18
NGB
GRM3
CXCL8
SBSPON
CDK14
TMEM40
JPH4
NPR2
RUVBL1
EEFSEC
TIPARP
C6orf58
TRIM52
PPARGC1A
ANGPT1
STEAP4
SGK3
HIGD1C
ARSG
BCL2L13
LDB3
MRGPRD
IFRD1
BEST3
SMYD1
HDGF
NWD1
IRX4
HIF3A
UGT2B10
MAX
TRPT1
NUDT22
DNAJC4
ULK4
TCAF2
MAMDC2
ERN1
CDCA7L
DAAM1
SCUBE3
KRT4
PCDH7
RFPL3
PDE9A
SKIDA1
UNC45B
ATOH8
SRSF10
SASH1
HAPLN2
GLYATL1
ZNF610
ANP32E
SUPT7L
SLC4A1AP
MX1
JPH3
STC1
LEFTY1
RAB37
TNK2
PPP1R15B
EYA3
EXPH5
NFIC
SCIMP
MTRNR2L1
ERCC1
MTCL1
RRBP1
SMIM34A
ADRA2C
ATP6V1G1
SLC16A8
TUBA3D
DHX36
DUSP6
VSTM5
UNC13A
MKLN1
ZBTB18
PRRT1
PPT2
ISX
TMEM204
ANKRD40CL
DDX19B
AARS1
ATXN2L
DIDO1
WDPCP
TGFB3
IFT43
LGALS7B
SULT1C3
TIMP2
FAM234B
TMEM100
CLDN8
FKBPL
ATF6B
MSX1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
POLR2J3
KCNQ3
WDR74
NOVA2
ARHGAP22
PIGZ
NPTX2
KLK3
DPP9
UGT2B28
ARHGEF38
GABRA2
MBOAT2
TLK1
KRT3
ZNF771
DUS1L
TMCC2
MUSK
MAT2A
CYP3A43
TRMT12
RGL3
IRGM
TEPSIN
NDUFAF8
BDNF
ADAMTS8
TMEM237
SLC29A2
EIF4EBP1
RPH3AL
IGFBP1
HDGFL2
MMP17
ZCCHC14
ANK3
MTRNR2L2
MSH3
DHFR
PALLD
MAPKAPK3
OR13G1
TUBA3E
TRIM49D2
TRIM49D1
MKS1
BIRC5
SH2D6
SEC13
ZNF559-ZNF177
ZNF559
PDGFA
CHCHD5
DAB1
IL20RA
ITPRID1
TFCP2L1
SLC30A4
LSM11
DLX1
UGT2B11
PHGR1
SEPTIN9
IFNLR1
LOC114841035
FKBP2
VEGFB
ALDH3B2
HES6
ZNF331
KCTD7
CBY3
EFCAB12
MTMR9
TSPAN3
TPT1
PRDM1
LBHD2
SYK
GAPDHS
CLIC6
TAOK3
CDC7
DECR1
PFKFB3
SMIM13
MACROD1
CDKN2AIP
SAXO2
EFL1
PHF19
MTRNR2L8
FAM222B
LAPTM4B
PRRC2B
FBXL20
SLC2A5
STK32A
FNDC10
TASOR
SIN3B
NEBL
ATXN7L2
KSR1
VAT1
RND2
NFIX
ANPEP
MILR1
TPD52
SLAIN1
CMTR2
CDRT4
SENP1
PFKM
NFIB
STAU2
CREB3L1
SCAMP2
WIZ
DLG2
POLR3GL
LIX1L
ANKRD34A
NUDT9
ZNF341
LOC100130520
CD300H
ZNF516
SNX16
CDKN1A
CD93
TUT1
WASHC3
EDN3
C3orf14
TTLL12
CPLX1
NSMAF
C4orf51
HIVEP1
TTC7A
PRR15L
PHACTR4
MCFD2
SMYD3
PYCR2
PAX6
C1orf116
SCIN
INPP5K
CCN5
USP44
TRAF3IP2
NME4
DECR2
PRKAG2
USP30
ZNF287
WRNIP1
LMOD3
AGPS
TMPRSS11F
KIAA1522
SAMD12
SHF
PRELID2
C3orf20
HUS1
TRIQK
ESRP2
NIBAN2
RNF186
UNC80
SHLD2
GLUD1
TMEM266
BRD2
MYH10
LDLRAD4
SRRM4
HSPA4
SPIDR
PEBP1
MOCS1
PLIN1
C1orf198
GSTP1
ETV5
TLE1
DBP
MOGAT2
SOCS2
CYRIB
REG1A
ZNF547
TRAPPC2B
MTNR1A
TBC1D14
PRMT8
INIP
PER1
UTRN
HSD17B6
RAB4A
COPRS
RGPD2
RGPD1
EFNA1
SLC50A1
HSPA12A
ENO4
MNS1
HOXC6
HOXC5
DSCAML1
RAB36
LRRC30
CDK3
GSPT1
THRSP
SRP9
TAS2R42
NR2F2
ANXA1
ADGRG7
EDARADD
PSCA
BLNK
AUTS2
SNAI1
ZNF614
GPR153
B4GALNT3
ABHD2
POLR2J2
VPS37C
G3BP2
CYP4F8
BCL6
BBS1
RERE
ANKRD28
SPATA6L
PLPP6
RUNDC1
PTGES3L-AARSD1
PTGES3L
PIH1D2
NKAPD1
ATL3
CYREN
ECE1
ARHGEF7
THAP4
PAH
RPL22L1
RTN1
CD177
TRIM68
STX16
FAM107A
FZD1
HERC3
RASSF8
DCLK1
MSMB
GLI2
PDE4D
RASAL2
KCNS3
SPTBN1
RAB11FIP1
NR1I2
KLF15
TXNRD1
CAMK1
KCNH2
GRHL2
XKR9
LACTB2
FRG2
RHOH
REP15
NFKBIA
TRMT61A
CKB
CEBPD
DRG2
NFKBIL1
DDX39B
ATP6V1G2
HDAC4
CYTH1
FAM214A
SIRT4
KCNIP1
NME1-NME2
NME1
CFAP74
SBF2
FAM174B
DHRS13
TMEM217
TBC1D22B
BCAR3
ZG16B
FANK1
FAM110B
COL23A1
MAD2L1BP
GTPBP2
CST2
TMEM87A
GANC
SLC2A9
CCDC86
CAMKK2
NAPA
GREB1
ST6GALNAC4
DNAH5
SYVN1
FAAH
OR1L1
FAM107B
TJP2
LOC105370980
DPYSL3
LRRC25
KRTAP9-6
INPP5A
PMVK
STRN
MAP3K6
H4C2
H3C2
EPB41L4B
CDHR3
BRD3
CCL14
C9orf152
FBXL5
TRIM33
SUGCT
MPLKIP
PANK1
EVL
LNX1
HOXA3
GMNN
FOXQ1
HERC5
SELENOS
MRPL21
KRT28
IGHMBP2
MMAA
EPHB3
RAD52
SNAP91
SMOX
KRT35
CHMP4C
SLC13A1
RGS3
CORO2A
TMEM210
LRRC26
TAFA4
AK4
CPT1A
TBC1D9B
SCUBE2
GSG1
LFNG
NBR1
IL15RA
FBRSL1
TNFSF15
SREBF1
LPCAT3
OTOL1
H4C3
H1-6
ODC1
MMP20
HS3ST4
ADAMTS3
TMEM68
TGS1
ST3GAL6
FOXN4
NUDT16
MMP15
DIO1
TBPL1
MTHFS
ITLN1
ARHGAP40
MED30
RP1
DNASE2B
RIN2
ZNF200
B3GNT6
SLC6A11
C11orf24
GOLPH3
PRXL2A
ITPR3
GPRIN2
OSBPL6
MPHOSPH10
MCEE
SLN
VPS13B
VPS26B
NCAPD3
ATL1
VEGFC
MAP4K5
WDR55
SLCO1A2
CGN
SMAD4
ZCRB1
PPHLN1
RAB11A
UCK2
IMPA1
AKNA
ZNF579
SRGAP3
PACSIN1
AMHR2
B3GAT1
SKIL
UBB
PGBD3
TMTC2
HEXIM1
ANO6
DPY19L4
RPS27
RAB13
GPR37
TAF8
RNF115
POLR3C
CCND3
UNC5A
TCHHL1
MLLT11
CDC42SE1
RRP1
SEMA6D
PDZK1
MB
IWS1
ACER2
HEXA
WASHC2A
LAMP1
WASHC2C
AP5Z1
PDGFB
ENTPD4
MYCL
UBE3C
SLC4A2
CDK5
RALGDS
MEF2C
SUSD4
SH3GL1
CHAF1A
SUMO3
SPATA25
NEURL2
CTSA
FRG2C
ANKS6
GET4
ADGRB3
MIER1
DAZAP1
TNC
PTBP1
SLK
KCNMA1
FGGY
SUMO2
ALG6
HM13
SCAMP5
OTUD7A
ADAM23
SMARCA4
ST7
CLCN7
ARHGAP32
FLYWCH1
MEOX1
BLOC1S4
TNNC2
SNX21
ACVR1B
SBK1
NSD1
KAT5
PARD6B
NPEPPS
COMMD9
ARID5B
AP2A2
CLSTN1
TFDP1
RABGAP1L
GRHL1
MACC1
CBX7
STRA6
SAP30
EFNA3
PRKCA
UBE2E2
SFXN1
GRIN2D
FASN
PPP5D1
NR5A2
CALM3
SPTAN1
KDM7A
IGLL5
IRF2BP2
TMCC3
CHD7
PLEKHF2
MINDY2
FBXL3
C17orf58
CHIC2
NOXO1
GFER
CACNA2D2
CORO7
PHF21A
ACTN4
MRPL45
ZNF668
PTP4A3
PATZ1
CFAP206
ANGPTL4
DIP2A
NDUFA4
PCIF1
IKZF2
DTNB
IGF1R
USF2
SLC1A7
CUTC
COX15
NFASC
SUMF1
PHIP
PRKCE
WBP1L
CELA3B
ATXN7L3
PEAK1
HMG20A
ADCY9
UBXN2A
LASP1
MSS51
FCHSD2
CABIN1
C1QTNF1
ATP6V0D1
AGRP
LYPLA1
OAZ1
TEX46
KDM1A
SLC25A11
RNF167
UPF1
MYEOV
PTPRG
ZBTB14
SYNPO
BSG
CTBP1
SCYL3
LCOR
ZNF217
MELK
LYPLAL1
GAB2
CCDC88A
CBX6
PTBP3
MLLT10
MAZ
TGIF1
MRFAP1
CLN3
APOBR
USP28
TRIL
EIF4H
IFT140
CRAMP1
PKNOX1
LIFR
GNB1
FBXL22
PYCR1
SPRTN
EXOC8
ARHGAP25
PVALEF
AATK
MAST2
SLC35A5
ATG3
STAT5B
RYK
TBL1X
TRMO
B3GALT5
SMURF1
ARPC2
GADD45A
ATOH7
FEZ1
THEMIS2
LIMA1
RABEP1
P4HB
ATG9A
ANKZF1
RALGPS2
NF2
HHAT
TMEM91
PRMT3
C3orf70
AMMECR1
CD82
SNX19
ARRDC3
MDM2
BTBD3
AVEN
NEK6
GBA
SLC6A6
TCTA
RHOA
BCL3
UBAP2L
C1orf43
EXOC6
SNX12
THAP1
SIAH1
TMEM239
RBKS
C20orf141
BABAM2
NAGPA
TSPAN7
PAPSS1
THAP12
GVQW3
SLC8A3
OPRL1
LKAAEAR1
DENND2B
SRSF6
ZC3H7A
PPP2R3B
FZR1
ZNF787
UBE2E3
HP1BP3
RMND1
PTPRF
ARMT1
YEATS2
KLHL41
UBXN4
NSD2
ACACA
APBB1
MAPK8IP1
NCOA5
SGPL1
WWP1
VGLL4
ASF1B
RRAGC
AMOTL1
PXN
CPEB2
MYOG
FHL2
TAOK1
TMEM120B
PSMA1
ABCA5
LARP1
LGALSL
RBM14-RBM4
RBM14
SINHCAF
MCOLN1
SRCIN1
SULF1
ROCK2
AFAP1
DOK7
PHC2
GPAT4
B4GALT2
ATP6V0B
CHST12
FZD3
FBXO16
PWP2
LOC102724159
GPSM1
GNA13
LRRC20
NEURL1
BAX
PPM1A
MRFAP1L1
AMDHD2
UBTF
HAGH
FAHD1
ZNF507
UXS1
KLF16
MPP6
TBC1D5
HSP90AA1
C15orf61
TP53BP2
PCBP4
PTK2
MCM9
MTHFR
CLCN6
UBE2Q1
SPEN
VPS33A
DLL3
DENND1A
C12orf66
C10orf95
ARHGAP28
SYNCRIP
MTMR3
LUC7L2
FMC1-LUC7L2
FMC1
CTNNA2
TCF7L2
RNF152
UPP1
OSTF1
NMRK1
LIMK1
HIF1A
SPCS3
PDIK1L
THUMPD2
MAP3K2
THOP1
SSBP4
SGTA
DLGAP4
RUFY1
VOPP1
GNB4
SEMA3D
ASPH
MAP4K3
SEC22B
BCL2L1
TADA2A
RXRA
CDON
DHX15
ATF3
CLIP1
ZZZ3
TCHH
IFI44L
GRAMD4
HES1
TRMT2A
RANBP1
TMCC1
PRR7
DGKZ
VSTM2L
USP2
LTBP4
TNNT1
MYL5
LARP4B
ATP5ME
FAM81A
APOC1
PDS5B
PDE3B
ZAR1L
PPP4R2
BRCA2
NELFCD
BRD4
EPC1
DCK
SPNS1
TNRC6B
SMARCB1
MAPT
SPRED2
ITPK1
FREM1
MAP4K1
EIF3K
HNRNPU
CYB5R1
REST
METTL9
EPHA2
CDKL5
FOXB2
FAM168B
CAPZA2
PPP2R5A
SUZ12
CNOT8
NEO1
MADD
BAIAP2
RAB6A
HNRNPH2
ATP2B1