ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017705 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◣ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

SOX2
TMSB4Y
GDF5
MTRNR2L1
MCC
TPM3
SH3KBP1
CNOT6
CCNL1
PLA2G4A
TMEM216
SLC25A23
CRB3
RAPGEF4
TAX1BP1
NPAS1
R3HDM4
FAM178B
CELA2A
HIPK3
SLBP
CDC42
SLC22A16
PSMB2
MIB1
C1orf127
PPFIBP2
C1orf198
PIK3R4
CYP27A1
AMBRA1
BMPR1B
IFNA1
PPM1A
NLRP2B
NSFL1C
KRTAP16-1
CDC42EP1
MYO9B
HAUS8
DIAPH1
NAAA
KLK5
EIF3D
SKIDA1
VGLL3
MRPS23
GGA1
DHX8
SLC6A16
COL26A1
TBL1X
NGF
EMP3
CCDC114
CALM1
BCL3
GMFB
ARHGAP39
SPATA31D3
DNAJC22
ARID1A
MAZ
USPL1
HMGB1
KMT2E
SYTL3
POR
SLC6A11
GBA
SSNA1
ANAPC2
SDCCAG8
CEP170
TCTE3
ERMARD
CD69
GET4
TRIP4
SCML1
MORC3
LY9
CCAR2
SRRM1
RIC8A
GET3
BET1L
BNIP1
VTA1
NMBR
MAD1L1
MTRNR2L8
BAZ2A
EMC8
COX4I1
CHIC2
ARL4A
RPS11
PTDSS2
PMF1-BGLAP
PMF1
UNC45B
DUX4
ATP6V0D1
AGRP
TPK1
C16orf54
CCNT1
POLRMT
STAT3
SURF6
DPP9
SNUPN
PA2G4
SPHK2
RPL18
FAM83E
TMEM238
NUF2
RPL28
ARF4
USP36
COPS4
TMEM250
ANGEL1
GOLGA7
ADCK5
GTF2B
SARAF
RPL10A
CAB39
GABPA
ATP5PF
KIFC1
CLN5
TSN
ATXN1L
YPEL5
SNAP29
PI4KA
SCAF11
ARID3B
HEXA
WASHC2A
MTRNR2L2
MSH3
DHFR
ERCC1
LAMP1
WASHC2C
AP5Z1
PDGFB
PRICKLE1
ENTPD4
SHLD2
GLUD1
RAE1
MYCL
UBE3C
SLC4A2
CDK5
RALGDS
STAU2
MEF2C
TM2D2
ADAM9
SUSD4
SH3GL1
CHAF1A
SUMO3
SPATA25
NEURL2
CTSA
FRG2C
ANKS6
ADGRB3
FRG2
MIER1
DAZAP1
TNC
PTBP1
SLK
KCNMA1
FGGY
SUMO2
ALG6
HM13
SCAMP5
OTUD7A
ADAM23
SMARCA4
ST7
CLCN7
ARHGAP32
FLYWCH1
MEOX1
BLOC1S4
TNNC2
SNX21
COL23A1
ACVR1B
SBK1
NSD1
KAT5
PARD6B
NPEPPS
COMMD9
ARID5B
AP2A2
CLSTN1
TFDP1
RABGAP1L
GRHL1
MACC1
SKIL
SLC45A4
CBX7
STRA6
SAP30
EFNA3
PRKCA
UBE2E2
SFXN1
GRIN2D
FASN
PPP5D1
NR5A2
CALM3
SPTAN1
KDM7A
IGLL5
IRF2BP2
TMCC3
CHD7
PLEKHF2
MINDY2
FBXL3
C17orf58
NOXO1
GFER
CACNA2D2
CORO7
PHF21A
ACTN4
MRPL45
ZNF668
PTP4A3
PATZ1
CFAP206
ANGPTL4
DIP2A
NGB
NDUFA4
PCIF1
IKZF2
DTNB
ZBTB7B
SMYD1
IGF1R
USF2
MKLN1
SLC1A7
KDR
CUTC
COX15
NFASC
SUMF1
PHIP
PRKCE
WBP1L
CELA3B
ATXN7L3
PEAK1
HMG20A
ADCY9
UBXN2A
TCAF2
LASP1
MSS51
FCHSD2
CABIN1
AUTS2
C1QTNF1
SEPTIN9
PPARGC1A
LYPLA1
OAZ1
TMEM266
TEX46
KDM1A
SLC25A11
RNF167
UPF1
SCGB3A1
TMEM40
MYEOV
PTPRG
ZBTB14
APP
SYNPO
BSG
CTBP1
SCYL3
LCOR
ZNF217
MELK
LYPLAL1
GAB2
CCDC88A
CBX6
FBXL5
PTBP3
DNPEP
MLLT10
TGIF1
MRFAP1
CLN3
APOBR
ETV4
USP28
TRIL
EIF4H
NUDT3
IFT140
CRAMP1
PKNOX1
PALLD
LIFR
GNB1
FBXL22
PYCR1
SPRTN
EXOC8
ARHGAP25
PVALEF
AATK
MAST2
SLC35A5
ATG3
STAT5B
RYK
TRMO
B3GALT5
SMURF1
ARPC2
GADD45A
ATOH7
FEZ1
TMCC2
THEMIS2
LIMA1
RABEP1
P4HB
ATG9A
ANKZF1
RALGPS2
NF2
HHAT
TMEM91
ZBTB18
PRMT3
C3orf70
AMMECR1
CD82
SNX19
ARRDC3
MDM2
BTBD3
AVEN
NEK6
SLC6A6
TCTA
RHOA
UBAP2L
C1orf43
EXOC6
SNX12
LAMA3
THAP1
SIAH1
POLR2J3
ARSG
TMEM239
RBKS
C20orf141
BABAM2
NAGPA
TSPAN7
PAPSS1
THAP12
NFIB
GVQW3
SLC8A3
OPRL1
LKAAEAR1
LFNG
DENND2B
SRSF6
ZC3H7A
RGPD2
RGPD1
PPP2R3B
FZR1
ZNF787
UBE2E3
HP1BP3
RMND1
PTPRF
ARMT1
YEATS2
KLHL41
UBXN4
NSD2
PMM1
ACACA
APBB1
MAPK8IP1
NCOA5
CDCA7L
SGPL1
WWP1
VGLL4
ASF1B
RRAGC
AMOTL1
PXN
CPEB2
SUPT7L
SLC4A1AP
MYOG
FHL2
TAOK1
TMEM120B
CALML5
PSMA1
LGALS8
ABCA5
LARP1
TENT2
LGALSL
RBM14-RBM4
RBM14
SINHCAF
MCOLN1
SRCIN1
SULF1
ROCK2
DUSP6
AFAP1
DOK7
PHC2
GPAT4
B4GALT2
ATP6V0B
CHST12
APBB2
PER1
FZD3
FBXO16
PWP2
LOC102724159
GPSM1
FRMPD1
GNA13
LRRC20
NEURL1
BAX
MRFAP1L1
AMDHD2
UBTF
HAGH
FAHD1
ZNF507
UXS1
KLF16
MPP6
TBC1D5
HSP90AA1
C15orf61
TP53BP2
PCBP4
PTK2
MCM9
MTHFR
CLCN6
UBE2Q1
SPEN
VPS33A
DLL3
DENND1A
C12orf66
C10orf95
ARHGAP28
SYNCRIP
MTMR3
LUC7L2
FMC1-LUC7L2
FMC1
CTNNA2
TCF7L2
RNF152
IFNLR1
UPP1
OSTF1
NMRK1
NBPF6
LIMK1
HIF1A
SPCS3
PDIK1L
THUMPD2
MAP3K2
THOP1
SSBP4
SGTA
DLGAP4
RUFY1
PRKAG2
VOPP1
LOC114841035
GNB4
FKBP2
SEMA3D
ASPH
MAP4K3
SEC22B
BCL2L1
TADA2A
RXRA
CDON
DHX15
ATF3
CLIP1
ZZZ3
TCHH
IFI44L
GRAMD4
HES1
TRMT2A
RANBP1
TMCC1
PRR7
DGKZ
VSTM2L
ATXN7L2
USP2
LTBP4
TNNT1
MYL5
LARP4B
ATP5ME
TNFSF15
FAM81A
APOC1
PDS5B
PDE3B
ZAR1L
PPP4R2
BRCA2
NELFCD
BRD4
EPC1
DCK
SPNS1
TNRC6B
SMARCB1
MAPT
RGS3
RRP1
SPRED2
ITPK1
FREM1
MAP4K1
MAMDC2
EIF3K
HNRNPU
GRM3
CYB5R1
CXCL8
ATXN2L
REST
METTL9
EPHA2
CDKL5
FOXB2
FAM168B
CDRT4
CAPZA2
PPP2R5A
SUZ12
CNOT8
NEO1
MADD
BAIAP2
RAB6A
HNRNPH2
ATP2B1
MYBPC2
ARHGEF12
LPIN2
ATP6V1G1
YTHDF2
STBD1
PRUNE2
SYNPO2L
PAIP2
CHD1
LRIG3
SPAST
MYO1D
PXT1
KCTD20
DTNA
BMI1
COMMD3-BMI1
COMMD3
PRKAG3
BAHCC1
SPAAR
HRCT1
SRSF4
FSCN1
SFR1
TARBP1
RUVBL1
POLE4
EZR
EEFSEC
CRTC1
SLC22A10
SGK3
SCAMP4
ADAT3
SLX4
RAD9A
PTAR1
NFRKB
TNK2
PACS2
BRF1
IKBIP
APOA1
APAF1
XRCC5
MIDEAS
C9orf40
ACTC1
IQSEC1
BRD3
SPATS2
LRRC47
QRICH1
SSH1
RNF170
KIF1C
INCA1
HOOK3
BCAT1
NNAT
BLCAP
PCID2
CUL4A
WDR45B
PPP6R2
GTF2I
JMJD1C
ZDHHC5
ZNF236
FGF6
DGLUCY
MPP5
KDM2A
LCORL
MUSK
ABHD2
ASXL2
EBAG9
DAPK1
ADARB1
CHEK1
OPN3
CHML
KSR1
CBLN1
ANKRD29
INO80C
THEM4
RARG
NPAS4
CRYGN
ANKRD26
CSNK2A3
RGMB
NUDT4B
DIPK2A
ITSN2
SYNJ2
NAPEPLD
EXOC7
SF3B1
LHFPL1
NDUFV2
MATR3
RDH5
KLHL32
KANSL3
ITGA7
FER1L5
BLOC1S1
SLC12A3
CCN2
MTCL1
MARCHF9
CDK4
ABCC10
GFRA1
GPATCH8
MXRA7
ANP32E
TMEM167B
PTPN12
LMNB1
EFNA4
KLHL8
IFNAR2
SRSF11
LRRC40
DRAM2
CEPT1
MFSD1
BCL2L13
RARA
LTBP1
CREB5
EVPL
NES
ARID5A
NKIRAS1
SRSF10
RNF187
MEF2D
TNNI1
STRN4
HHIPL2
FKRP
SNORC
EPC2
SH3PXD2A
HNRNPD
POLA2
CEP162
HERC5
LSMEM1
GSTP1
SLURP1
RBPJ
PEX10
MYOD1
HIGD1C
RIN2
NR3C2
UBE2Q2
DHRS13
CCDC171
BTBD9
PRKAB2
MXI1
CHD1L
NEDD4
FKBP1A
CYP27C1
CLDN5
CDC73
ACOT9
STX16
PTMA
BEST3
SREK1
SOBP
CD47
ZNF318
RFTN1
HDGF
ZBTB12
EHMT2
C2
BTBD1
ATP6V1H
ZSWIM5
KLHL30
ARMH3
OPRD1
SLN
NNMT
ABCC3
SPG21
SLC19A3
PPP1R3D
PLXNB2
FAM217B
SBSPON
HNRNPA2B1
CBX3
ST8SIA1
SMARCD2
CNN3
CHD3
VEGFB
NBPF4
MX1
COL16A1
RYR1
RNF44
MIF4GD
SSBP1
BRD2
KRT4
SBK2
PDZRN3
UTP23
MTNR1A
COX20
PCDH7
UGCG
DISC1
AMIGO1
TBPL1
STAG1
SPRY4
TAFA5
LIMCH1
ABLIM1
RAB10
HRH1
CHRNA7
C3orf14
IZUMO2
FBXL17
INKA2
SSTR5
ZNF185
CIC
BTG3
SPTBN4
SH2D3C
SKP2
LMBRD2
DYRK2
RUNX1
TBC1D9
SIX1
TPBGL
TINAGL1
THOC1
FOXO3
SCUBE3
EYA1
TSC22D1
WDR87
SIPA1L3
CNKSR2
TMEM205
SRI
RAB3D
CCDC159
UBXN2B
TBL2
RRBP1
LBR
ANKRD12
ZNF516
UNKL
GMEB2
UGT2B10
LLGL1
LBH
KMT2C
FBXL16
TLK1
SOAT2
IGFBP6
CUL5
SASH1
ID3
PIK3AP1
TCF4
KLHL24
FANCC
TPM1
FAM189A1
AKAP1
MUSTN1
ITIH4
USP6NL
BSN
ULK4
ADM
PPP6R1
SYNGR1
PDS5A
HSF1
BOP1
TANC2
EVL
UMODL1
KCNQ3
IL32
NR2E3
COPG2
ZNF652
RGS19
ZNF559-ZNF177
ZNF559
SOCS2
MAK16
KDSR
POLR2J2
NFIC
DENND5B
SVIL
HOXC13
TRAF4
RAD23A
ITGB3BP
INTS12
HECTD2
GSTCD
EFCAB7
CORO2A
TP53I13
CELA3A
ABHD15
ZNF821
TMEM145
ETNPPL
AGTPBP1
ECE1
NR1D2
DUSP14
DNAJC5
KDM3A
TACC1
PTPRD
UBL4A
SPATC1L
SLC10A3
ENTPD2
PPP1R15B
CREB3L1
ARHGAP5
SMAD7
MAPKAPK3
CAMKK2
ZBTB8OS
SLC25A12
RBBP4
MAX
GABRA2
C2CD5
SCIMP
VPS11
TRIM62
TM7SF3
MAPK3
ISX
YPEL1
MCUR1
INTS10
TMEM210
LRRC26
E2F6
SOX12
MAST4
ZFP1
TNNT2
JPH3
HSPA2
FAM222B
GRN
ACSL4
ZNF92
DYNC2H1
ADI1
SAXO2
FKBPL
EFL1
ATF6B
FBXO30
PAFAH2
NTSR1
SREBF1
ATP6V1C1
TXNRD1
NUP50
PLEKHA5
TGFB3
TAOK3
IFT43
CCNI
ANGPT1