ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
MAPKAPK5
DYNC1LI2
NVL
CACTIN
NUP85
ICE1
PSMD12
MRPS7
GGA3
POLR3F
DZANK1
NCLN
VDAC2
GOSR2
REXO1
OAZ3
MRPL9
C19orf48
HSPA9
BLCAP
NME6
IPO13
POLR2E
SUCLG1
UBE2I
SUDS3
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
EFTUD2
CCDC103
RWDD1
ZNF576
IRGQ
MRPS5
ACTR10
RBBP5
COX7A2L
DCTN1
VTI1B
PSMD1
CDC73
PES1
SEC61B
ALG2
COMMD1
CCT4
SART3
ISCU
UPF2
HADHB
HADHA
LYRM4
FARS2
RABGGTB
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
PI4KB
MTRNR2L8
SUPV3L1
NUP205
STAM2
SKP1
PNO1
RPL21
USP1
ZRANB2
FLOT1
PAK1IP1
C6orf52
ATP5MG
GOLGA5
DVL2
SELENOF
HS2ST1
VARS1
GADD45GIP1
B3GALT4
PTGES2
KRBA2
TAF9
RAD17
AK6
ANAPC7
SNAPC5
RPS27A
CLHC1
PDHX
APIP
AXDND1
DDX39B
EIF2S3
SMC2
EIF4ENIF1
MRTO4
EMC1
TTC8
PIN4
ZC3H10
TM9SF1
TMED1
RPL35A
IQCG
C6orf226
RPS23
ATP6AP1L
ATP5F1E
VPS28
ADK
AP3M1
H4C15
H4C14
PCBP1
DPH6
SF3B3
COG4
H2BC4
H2AC6
NDUFA10
SCRIB
RXYLT1
AMDHD2
BICRA
SUMF2
RBKS
BABAM2
NRAS
SYCE2
MRPL38
H4C12
RPS12
H4C11
GLRX2
UFM1
DENR
XPNPEP3
ST13
DGKZ
C18orf32
FAM104A
C17orf80
BAG6
ARFGAP2
CDK12
PYGO2
LOC101928120
EDC4
CD68
RNF225
MRPL24
PAF1
GORAB
MTRNR2L2
RPN1
PROSER1
NHLRC3
SYNRG
PCBD2
ANKLE2
ALKBH5
H3C15
H3C14
H4C3
HSPA1B
H1-2
CHMP2A
GTF3C4
DDX31
DNAJC9
GET4
H2BC21
H2AC21
H2AC20
C17orf49
EXOSC6
PRKAG1
ABTB1
RGL2
H1-4
H2BC5
DDAH2
LAMP1
SIRT7
RPS29
LRR1
INPP5E
SRSF11
LRRC40
ZNF34
CUL7
TBCK
AIMP1
CMTR1
RPL7
RDH10
VPS9D1
NDST2
POLG2
PHF1
STK36
RNF25
FAM131A
MEPCE
ZCWPW1
EPN1
PRRT2
CISD3
BNIP3
CNPY2
RIT1
RHOT2
LMAN2
VARS2
FAM83E
RPS10-NUDT3
RPS10
C19orf53
PRKRIP1
SURF6
TRAP1
ZBTB45
MYG1
ZNF580
NAPRT
ZNF383
TTC33
RAD23A
BTBD10
GPAA1
ATAT1
MSH4
RRP36
TIMM13
CCDC34
SMG5
POLDIP3
SEC11C
DNAJB14
SGSM3
WDR90
AGAP11
SLC39A13
HMCES
RICTOR
HOXA5
MOV10
H2AC19
H2AC18
GCN1
ARHGAP11A-SCG5
ARHGAP11A
OSGEP
APEX1
MMP24OS
MMP24-AS1-EDEM2
C19orf71
DHRS11
TMPPE
GLB1
RCOR3
CD320
CLUAP1
SECISBP2
SPCS1
GLT8D1
ECI1
ROGDI
POLD1
SF3A3
FUT11
DPH7
POLR2J3
LRRC37A3
ARF3
VWA7
CENPBD1
ATXN2
LLGL2
H4-16
GABARAP
STYXL1
SLC25A10
H4C8
MRPL34
HDAC10
JMJD8
GGA2
C8orf82
MRPL53
JMJD7-PLA2G4B
JMJD7
SLC25A11
RNF167
ZMIZ2
CELF1
TRIP4
STRIP1
COMT
PSMD5
NAT10
EIF4A1
FAM174C
SCAMP3
CCAR2
DHPS
GTF2IRD2B
GPS2
POMZP3
CYBA
TBC1D13
SLC26A11
SGSH
MAZ
NDUFS3
KBTBD4
SRRT
DALRD3
BAZ2A
NUF2
H1-5
WDR6
H2AC16
NDUFS7
ARHGEF1
PUF60
COMMD2
PNMA1
MAP2K2
RPL37
MRPL40
HIRA
H3C13
H2BC18
CDK11A
ADPRHL1
HSD17B8
CRELD1
H3C2
H4C1
H3C1
NOP14
GRK4
TSPAN10
NPLOC4
NECAB3
H2BC11
H2AC11
DRAP1
C11orf68
NOTCH2NLA
LRP6
XRN1
PDCD6
CS
ABCB6
DPY19L4
TCHP
MAD1L1
NPAS4
LIFR
WDR70
MAPK8IP3
TMEM43
CHCHD4
PAIP1
SELENOH
POLR2J
ARHGAP12
ZNF446
BSCL2
ISG20
GRAMD2A
ZNF653
H4C2
SCAP
C5orf24
AURKAIP1
ERGIC2
ZNF341
RCE1
GPN2
LBR
TATDN3
NSL1
RNF166
CTU2
FLOT2
H4C9
SDE2
C12orf57
C7orf26
ZNF770
TAOK2
PMF1-BGLAP
PMF1
AKAP8
TRIP13
BRD9
THOC5
PIGO
NXF1
NCBP3
DNAJB12
SDHA
CCDC127
CSNK1G1
ABCF1
NFAT5
TMEM267
FBXW9
VPS50
HEPACAM2
KIF2C
H2BC12
H2AC12
NME3
SCAMP5
DIDO1
ERCC6L2
SSBP1
CUL9
WDR47
ECHS1
H4C5
SMN2
SMN1
MATR3
TMEM39B
SHTN1
C16orf46
POLR2C
CHD8
EHMT1
BCAP29
PACS1
PCBP2
CCDC138
CRTC2
RAB5B
GRB2
COX20
ASXL1
RUVBL1
EEFSEC
ZDHHC23
NELFA
PURA
MARCHF6
ANKFY1
ORAI3
NEURL2
CTSA
SMDT1
GSTA4
CCDC43
CTNNB1
MTF2
TOMM20
LPCAT1
CCDC86
MYO18A
DSTYK
ZNF511
TUBGCP2
ARMH3
IREB2
TRMT2A
RANBP1
MEMO1
GBA
GAA
TXN2
MTIF2
OTUD7B
SPATC1L
B4GALT7
TYSND1
ROPN1L
PTCD1
CPSF4
RAB3IL1
NOTCH2
MDM4
DCXR
SLC15A4
CDC5L
TCF3
AHRR
RMI1
HNRNPK
TOM1
THEM4
DRG2
ANTKMT
NOP2
EIF3F
PDCL3
PRICKLE4
FRS3
ILF2
ATXN7L2
NOLC1
DECR2
TUBGCP6
RAD9A
EXOC3
MRPS23
TLCD1
EIF2D
C6orf47
NAA80
HYAL3
CHD1L
NDUFB2
PRKAB2
SKA3
MRPL57
PCBP4
NT5C
TRAF4
CYRIB
ICMT
KLHL12
RPP40
TAS1R1
NOL9
BRIX1
TAF2
BHLHE40
NSFL1C
TRIM37
SLC29A1
OSMR
CLCN7
LRRC59
ZNF286A
TGOLN2
THOC6
HCFC1R1
MCOLN1
CALM1
GSTO2
TSFM
CASP2
RNPS1
JOSD2
VEZF1
SNAP47
ZNF76
JMJD4
AFF4
CLPTM1L
CPSF1
ZNF583
TOMM6
CYB561
HASPIN
CSRNP2
DCP1A
CD63
GPX1
SSX2IP
ANKRD13C
LTBR
TDP2
ACOT13
SFXN4
SYT7
GABPB2
RSAD1
AKAP1
RBL1
MED1
WDR74
MAN2C1
UPF3A
RIPK1
SLC50A1
SLC45A4
PABPN1
CCDC130
CEMP1
MADD
AGL
WDR11
SNTB2
AGO3
RABIF
B3GAT3
AMZ2
SUGCT
MPLKIP
FKBP5
FAM162A
CCDC58
TMEM170A
NOC3L
TMEM179B
BAX
CIAO3
GADD45A
FIS1
ATP6V1H
USP21
CXorf38
NOTCH2NLC
ATAD2
NR4A1
WASHC2A
EIF4H
NAA60
H2BC8
H2AC8
MBTPS2
ENDOV
ENOSF1
DNAJC25-GNG10
DNAJC25
LARP1
FAM156B
FAM156A
H3C8
HNRNPA1L2
IRF9
HMGB1
GEMIN7
GNE
YAP1
USPL1
SLC52A2
FBXL6
DAGLA
PLEKHG2
CHAF1A
BRWD1
TIPIN
ERBB3
KAT6A
RASA4B
CEP350
YARS1
S100PBP
INPP5K
PGAM5
NOC4L
DDX51
SIRT4
MRPS18C
HELQ
KMT2A
SH3BGRL3
TONSL
ABCF3
HIBADH
PBLD
HNRNPH3
GPRC5A
GTF2H2C_2
GTF2H2C
AMACR
RRP1
CAPNS1
WDR62
THAP8
SCAND1
PPP6C
FOXJ3
CCDC24
SRA1
TAB3
VPS4A
PRDX1
RRP8
ILK
TMEM68
TGS1
POLG
QRICH1
MRPL28
DDX56
MVB12A
SGPP1
NOTCH2NLB
TMEM222
STX18
MLXIP
ATXN1L
PPFIA4
UCKL1
DPY19L3
NUP133
TMEM101
NEK2
YOD1
MLX
RBM4
PUS7
GANAB
NADK
JUND
POP5
SUPT16H
SMPD1
MTA2
MRPL12
CLCC1
FOXRED2
TSKU
NTMT1
JRK
PPP6R1
ZBTB7A
TBL3
HELLS
SEC31A
PIP4K2B
TAF10
FDX2
TRMU
DCAF10
HAX1
JPT2
KIF21A
SNAP29
PI4KA
ZNHIT2
CNOT6
MET
TTC17
BANP
PMM1
C10orf143
H3C7
MROH6
CLK3
NELFB
IPO9
PDF
MED23
CBX2
ZYG11A
UHRF2
TAF13
NANOS1
ZNF131
ADAT1
SNX29
TMEM132A
MTARC1
ZNF581
COX5A
ZFX
GGA1
ARFGAP3
NAPA
ZFP36L1
UBE2J2
PSMG4
BPTF
LRRC8D
SPIRE2
AKIRIN1
KCNK1
TCTEX1D2
SRSF4
FAM207A
COG2
VCP
RPP21
TBL1X
HDHD2
TJP1
TJP3
ADGRL1
LUC7L2
RFX1
SLC24A1
INTS14
GTF2A2
PARVA
L3HYPDH
JKAMP
MKRN2
MRPL58
MLST8
TM7SF3
MRM1
BICD1
NFYC
PGAP6
CDK5RAP1
ARHGEF5
ZBED5
TRA2B
MRPL3
ADAMTS10
GXYLT1
GALE
ABCA3
OTULIN
MRPL45
DUS3L
TOR1AIP1
MDP1
CELSR3
ZNF346
DYRK3
DENND4B
ZNF865
PTPN4
BUD13
NADSYN1
ZFP1
ATR
B9D1
MAPK7
AXL
CCNT1
SSH1
ADARB1
FAM228B
SF3B6
TOB2
ZNF623
PSMA1
MED16
MIS18A
IDI1
WDR37
TULP3
KPNB1
ARL6IP1
CIRBP
IMPA1
ATAD3A
WDR24
SLC39A3
CSKMT
C11orf98
ZBED3
ST6GALNAC2
ZCCHC14
ATF7-NPFF
ATF7
TBCB
POLR2I
NTAQ1
EFHC1
TRIM65
COX19
DIAPH1
CNP
LMNB1
MTG1
ZNF594
USP36
PPM1H
GTF2H3
EIF2B1
TTI2
SRP19
PNPLA6
KHSRP
C16orf70
DONSON
BOLA3
ZFYVE9
ZZZ3
RC3H2
SIPA1
MIEN1
DGAT1
GATD3B
GATD3A
CYBC1
TEFM
NUP155
ACAD9
SRCAP
LOC730183
MARCHF7
NUTF2
CENPT
SLC44A1
RCCD1
HNRNPUL1
DUS1L
SPSB2
NAA35
ZNF497
MAK16
PKN2
DHX8
SNX24
KIF27
FBXO4
CZIB
SMIM10L1
PRH1-TAS2R14
CDC16
AGBL2
FAM53B
DNTTIP2
GMPPB
POLE4
ACSF3
ZFP64
DIP2B
FADS2
HSD3B7
NDUFS6
STMN1
ADAMTSL4
VKORC1
TIMELESS
PPP2R1A
PLD6
IBA57
TNKS1BP1
NSMCE4A
RGP1
GBA2
MRI1
SNRPE
CCDC134
SNRPC
RABGAP1
BAG2
SLC25A42
ACADM
H2BC17
H2AC17
ANKRD40
MRTFB
APTX
BNIP1
ZNF584
AKAP10
ZSCAN12
PWWP2A
NIPBL
ZFAND1
TRMT61B
ZNF546
TBK1
IMPDH2
GOLGA1
SELENOO
PSEN2
DR1
KLC2
RBM17
IPO4
TUBGCP3
MICALL1
PIMREG
NR2C2AP
FAM118A
FNBP1
C7orf25
H2BU1
H2AW
TUSC2
TSR3
GNPTG
CPPED1
SLC35C2
FBXO32
TEDC2
ZNF205
RBM12
CPNE1
POLR2J2
ITFG2
IFRD1
ZCCHC4
TMC4
ATPAF1
FAM20B
SMIM13
FRA10AC1
MCUR1
CANX
ERLIN2
CAMTA2
NLE1
NAA38
PFKFB3