ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025676 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◣ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
PEMT
MTRNR2L2
MTRNR2L8
NME1-NME2
NME1
BAX
NME2
CCDC86
MLLT1
SLC35E2A
NOC4L
DDX51
SLC35E2B
TRIAP1
ZNF485
SNRPD1
FAM98A
COLEC11
SSNA1
ANAPC2
SNX25
CFAP97
AKAP10
PHF7
BAP1
DRG2
RGPD2
RGPD1
MRPL55
DDX42
CCDC47
GEMIN7
P3H4
FKBP10
GTF3C4
DDX31
TBL1XR1
EIF5A
FAF1
TMEM248
SRSF1
DHX33
MARVELD1
PCBP1
IARS1
ZFP36L2
TENT4A
NPM1
MTHFD1L
SGTA
CWC25
UBE2K
G6PC3
SNRPE
RAN
TET3
DUS2
DDX28
RAD50
NOC3L
RBM42
ZNF639
EIF3B
HMGA1
CLUAP1
MED9
MRPL3
CAD
GCN1
SLC25A10
SELENOO
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DIAPH1
KCNQ5
SYNCRIP
COPS3
PIGL
MDN1
NCBP2AS2
NCBP2
ZSWIM7
TTC19
MAPKAPK5
SPRED1
CLCN7
EBNA1BP2
CFAP57
NOP16
HIGD2A
PTDSS2
ICE2
UTP4
DERPC
CHTF8
SMYD2
UBFD1
EARS2
SNF8
CENPV
DR1
C16orf91
MAST2
ABT1
LARP1
DPH5
PDCD11
ATP5MD
USP22
USP32
RBM18
MRRF
DUS3L
ETF1
HNRNPF
GET4
ARSG
PARP1
FRA10AC1
ZBTB44
KMT5B
CNBP
EEF2K
RCC2
POGK
MEF2D
ADORA2B
PWP1
RNF166
CTU2
GPSM3
PMS2
AIMP2
KLF16
SECISBP2
THNSL1
PSMB6
CBWD5
CBWD3
PDS5A
FNTA
TBRG4
COA8
BAG5
CMSS1
SCAND1
NR1D1
RRM1
CTU1
RPL18A
PLD6
PBRM1
GNL3
LONP1
CATSPERD
CELSR3
LRP6
EPRS1
ATL3
XPO5
POLH
TAF5
OSGIN1
WDR4
PPRC1
GTF2H3
EIF2B1
ELP3
RPL10A
NUP50
PRKAR1B
TRAP1
SAMM50
ADPGK
HAX1
CUTC
COX15
EIF4H
TOMM34
DIMT1
EIF4B
YARS1
S100PBP
RRP1B
HSF2BP
ASAP1
HNRNPL
LRRC58
GLRX2
PFAS
NCOA5
MRPS17
CLINT1
HTATSF1
COX10
TMEM38A
SMIM7
SLCO4A1
TRMU
WDR3
GDAP2
GATAD2A
SP3
DCP1A
MTG1
DOHH
TRIM16L
PKN2
UTP18
MBTD1
SPRTN
EXOC8
PHF12
SRSF10
DNAJA3
N6AMT1
ANKRD26
RAB35
CCDC12
ADI1
SUGP2
ARMC6
SMARCA4
VDAC3
LUC7L2
XRCC5
MLST8
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
BANP
PDRG1
TUBD1
RPS6KB1
FAM220A
PAGR1
KHDRBS1
ENTPD6
POLA2
SDHA
CCDC127
PRMT2
CXorf38
RAD21
ACTN4
BNIP3
FAM122A
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
SYNGR4
SAYSD1
CENPBD1
MCRS1
TOLLIP
NPRL3
SAMHD1
ATP6V0E2
NBPF1
FAM200B
PPP6R1
MAP2K2
ZBTB17
GTF3A
RPP38
RANBP3
PTPN4
ABCF3
EHMT1
DAGLB
THAP7
RABIF
DDRGK1
INTS13
FGFR1OP2
FAM24B
MAN1B1
MRPL54
C1orf74
CHMP7
SPPL2B
LSM7
LAMP1
MTHFSD
CBX5
MYPOP
ZNF12
WIPI2
HNRNPH1
EID2B
HNRNPA1
FAM71E1
EMC10
FMC1-LUC7L2
ABCA3
MRPS18C
HELQ
PREB
RAB18
TMEM250
CKLF-CMTM1
CKLF
FMC1
MIS18A
NDEL1
NAGK
IFNAR1
SMIM11B
SMIM11A
NANP
XRCC2
SH3YL1
ACP1
HASPIN
ALKBH5
RRP1
SLC2A11
AKAP1
PITPNB
TMEM209
SUMF2
CRTC1
PATL1
LOC100287896
LIPT2
KDM8
RCBTB2
MAP2K7
HNRNPH3
PPP2R3B
TRIM37
FADD
PPP1CB
PPP2CA
PBLD
CDC7
YEATS4
DENR
TMED4
MOK
NOB1
SLX4
SELENOI
ADGRF3
ERCC6L2
NELFCD
DCAF8
SOD2
SPDL1
MRPL45
LOC100289561
CCNT2
TMEM141
PTK2
CACYBP
HINT1
STYXL1
RPL36
ZNF576
IRGQ
CDC5L
SKA3
MRPL57
SAFB
SAFB2
SLC39A7
RXRB
SLC25A11
RNF167
OARD1
NFYA
USP21
CHD1
SEC22C
MTCH2
PUF60
OPA1
RBM17
STXBP4
COX11
TXNL1
LOC730183
FUT8
SRCAP
ZZZ3
SMG9
TIPIN
VPS13A
NUP107
SNRNP70
BTBD10
MARCHF7
ZNF583
FAM120B
COPB2
ASNSD1
ASDURF
AMZ2
RPS19
MRPL24
TAS1R1
NOL9
NOP14
GRK4
RSRP1
TRMT61B
HP1BP3
CCT5
ATPSCKMT
COQ9
CIAPIN1
TRMO
RTL10
GNB1L
RALGAPB
EIF2D
OSCAR
NDUFA3
RPL12
LRSAM1
GRB2
TOMM20
TUBGCP5
SLC15A4
MAD1L1
RAD23A
MSL2
DPF2
GMCL1
NCAPG
ECHS1
MAGOHB
POLR2J3
ARF3
QRICH1
UHRF2
PARK7
SMG5
TOR1AIP1
TBC1D5
MPC2
DCAF6
TDP2
ACOT13
TMEM18
POP7
TAOK1
XPC
LSM3
CCT8
C5orf24
NAA35
C6orf89
GPAM
CCNQ
SPOP
THAP5
DNAJB9
PPP4R3B
RPS7
SRRM1
WDR73
ANKFY1
SUPT5H
SARS1
TAX1BP3
EMC6
DHDDS
RPS6
APBA3
FBXO31
ASXL1
EEF1AKMT1
CCNC
BLOC1S4
ACAT2
INTS7
DTL
TMCO1
CRB1
CAPZA2
NUP214
DYNC2I1
THOC3
PRDX1
ZFP91
SMIM14
NCOA4
POM121
RFC5
CASP2
COP1
SCAMP5
GDF5
CEP250
GPBP1
ERGIC2
COASY
PPME1
C2CD3
AKAP11
MAK16
CHAF1A
RPS11
SMIM27
AP3B1
JOSD2
NAPG
HAUS5
RPL17-C18orf32
RPL17
RBAK-RBAKDN
RBAK
RPS28
NDUFA7
ZNF286A
GPATCH3
CAND1
TTC32
NOL11
PURA
CDK12
GID8
DIDO1
DNAJC27
FBRS
AURKAIP1
TBL3
FSIP1
ARFGAP3
ZBTB2
SMIM10L1
PRH1-TAS2R14
DYRK1B
NAA38
CYB5D1
HSPA4
CFAP70
GAS8
MAPK14
MAP1LC3B
DBR1
ATF2
C6orf136
SNX5
MGME1
MRS2
USP10
CDC34
WDR13
SHBG
FXR2
FAM135A
XPO7
TTC23
LRRC28
PAPSS1
PDXDC1
SMARCC1
NDUFA11
DARS1
CISD1
NKTR
STS
PUDP
TIGD1
GMPPA
EIF4E2
PSMD5
EHD1
AHCTF1
LTV1
RNF149
ETFA
NDUFA8
MORN5
MRM3
GLOD4
LPXN
IREB2
HSF1
BOP1
EPS15L1
VMAC
C8orf48
CEP350
SRD5A1
UBE2D3
MMS22L
ZMYM4
MATR3
EIF5
USO1
ICMT
MINK1
ZNF664-RFLNA
ZNF664
CCDC92
WDR18
STRIP1
PRELID3B
U2AF2
RAB33B
PALB2
DCTN5
ARPC2
ZNF638
SIRT5
UROS
BCCIP
MYL5
ATP5ME
FASTKD2
EIF4A3
CC2D1A
C19orf57
PSMB2
SYS1
TMEM104
NAT9
TMEM70
ESRRA
RPL27A
SUGP1
MAU2
HINFP
HERC1
SHPRH
ATAD3A
POLDIP3
TFB2M
CNST
SCAF11
MAP3K7
KIFAP3
AP2B1
RSL1D1
EFHC1
TMEM63B
MRPL14
RBM15
CYCS
SRRT
TIGD6
HMGXB3
SEC62
HSBP1
SLC25A4
SEPTIN7
RCC1
TMEM63A
CSDE1
MORF4L1
VMP1
PTRH2
TMEM43
CHCHD4
FAM76A
CNP
PRDM4
GATD3B
GATD3A
CUL3
MKNK2
RPL7A
MED22
MAPKAP1
ZCCHC14
NUF2
WRNIP1
RPS15
MBTPS1
NFYC
TIA1
CCDC93
LANCL2
WDR43
DHX37
DSN1
MED1
MICOS10-NBL1
MICOS10
AASDH
KIAA1191
DFFB
CEP104
NBPF3
NUDCD2
HMMR
ZNF346
CHMP2A
DCTN2
POLR2J
C15orf40
RPL8
EID1
SF1
ALG8
RFX1
ADAT1
PXMP2
POLE
MRNIP
THAP1
MRPS7
GGA3
HBS1L
GLCE
CDC20
CIAO3
IKZF5
ACADSB
GOLGA1
PRKDC
MCM4
PUM2
GZF1
DLGAP4
POLR2J2
NUP153
CD2AP
SPAG16
FIP1L1
KIN
ATP5F1C
TMX1
SRP19
SLC12A2
B9D1
SBNO1
WDR27
C6orf120
PIAS4
ING1
GRWD1
WWOX
RPS29
ARHGAP35
PPM1G
MRPL21
IGHMBP2
CPLANE2
RBPJ
PTBP1
ATF7-NPFF
ATF7
APTX
ENDOV
UBR3
TSEN2
ZNF317
USP54
MRTFB
RBM26
RC3H2
HSPH1
THADA
LINS1
ASB7
YIPF3
POLR1C
MBD1
PCGF1
SMG7
UIMC1
CHUK
DNTTIP2
CCDC77
CLPTM1L
ZBTB14
TGOLN2
TRAPPC2
OFD1
RPRD2
RNPC3
C8orf37
MICU2
ZFC3H1
THAP2
CD320
UPF1
NSUN3
DHFR2
WDR77
ATP5PB
CFAP410
NRBF2
PFKFB4
TSACC
CCT3
IPMK
NAPB
CCNT1
TMEM127
CIAO1
WWP1
DNMT1
SIPA1L1
EXOSC10
SRSF11
RNF32
AMACR
ZNF248
KIF22
NAT10
MTHFD1
MFSD8
ANKRD13C
ABHD18
ASH2L
ZKSCAN2
SMARCA5
POLR2E
TSSC4
ARF4
CAPN7
RAD23B
SF3A3
WDR6
YOD1
GDI2
IMP3
TIGD5
EEF1D
POFUT2
LIN7C
TADA3
ARPC4-TTLL3
ARPC4
NFXL1
PFKFB2
PGRMC2
EIF2S2
EIF1AD
BANF1
SNRPC
PRPF39
APOLD1
TMEM183A
ZNF692
C11orf80
FZR1
PAXBP1
NPTN
ANO10
ABHD5
ZC3H14
INO80C
CNOT4
POLRMT
ATP5MC2
DHX9
KDM3A
CBWD6
CCSER2
ATP5PO
SPEN
TAB3
IPO11
RBBP5
IQCC
AGA
ACAD9
VPS13C
C1orf53
IFRD1
ERICH6
EIF2S1
ATP6V1D
ZNF182
SPACA5
FANCD2
PHF23
PPA1
RELCH
PIGN
INKA2
DDX20
UQCR11
NRF1
ZNF414
UNG
METTL16
TMED3
TMEM109
ZNF420
AGBL3
DNAJB4
CSNK1A1
SPG7
ZNF652
HEXIM1
E2F6
SLC30A5
TMX3
CCDC102B
YIPF2
TIMM29
SREBF1
KBTBD6
SAXO1
RRAGA
THAP12
GVQW3
CENPS-CORT
CENPS
ELP6
MRPS18B
STX1A
PAPOLA
DDHD2
CLIP4
MOCS2
SLC35B4
SMARCD2
SMC4
IFT80
DDX19A
SPECC1L
RPS6KB2
SEH1L
PGP
RAPGEF6
DLD
ZNF136
TBCCD1
NUP62
IL4I1
ATF5
ERLIN2
DSE
DHX34
STX16
TAOK2
PDCL3
RPL26
SPAST
CNTROB
PCIF1
MYO9B
HAUS8
FUBP1
KCTD13
ASPH
CCNJ
DMAP1
PPIL3
NIF3L1
ZNF473
VRK3
ZSCAN22
FITM2
FAM227A
CBY1
CARNMT1
EED
ZDHHC12
INTS9
HMBOX1
PIGW
MYO19
UGGT2
RNF130
USP39
FAM149B1
ECD
TRAM1
RFXANK
BORCS8
TSPYL1
TMEM245
KATNIP
GTF3C1
COX6A1
SLC39A9
LSG1
ERH
BRD2
TMEM101
PGAM1
CLPTM1
ERCC6
LAGE3
RPS15A
ARMC2
GORASP2
CCNI
CBLL1
BTF3
SNRPB2
CREBZF
CEP20