ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX182682 | MCF 10A
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◣ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

N6AMT1
ANKRD26
CCDC12
DNAJA3
C10orf88
SPRTN
EXOC8
TUBD1
RPS6KB1
ADI1
XRCC5
SNAP47
JMJD4
PHF12
SMARCA4
SYNGR4
NUP107
PRMT2
MRPS18C
HELQ
PAGR1
KHDRBS1
RAB18
RAB35
PPP6R1
POLA2
TOR1AIP1
ADPRHL1
POU2F1
CHMP7
OPA1
MRPL54
APBA3
NUF2
MLST8
MRPL24
RABIF
FAM24B
MAP2K7
LONP1
CATSPERD
EIF2D
ACTN4
SAMHD1
RANBP3
SH3YL1
ACP1
SAFB
SAFB2
VPS26B
NCAPD3
HNRNPH1
FAM98A
SUGP2
ARMC6
TMEM101
CXorf38
THOC3
KDM8
SRSF10
EID2B
XPO5
POLH
MYPOP
MAN1B1
RPS7
MIS18A
ABCA3
BANP
OSCAR
NDUFA3
ZNF576
IRGQ
IFNAR1
MSL2
MRPS31
DDRGK1
WWOX
TMEM250
STX16
PPP2CA
ZBTB17
TOMM20
SDHA
CCDC127
ATP6V0E2
RPL36
FAM220A
NAGK
XRCC2
SMIM11B
SMIM11A
VDAC3
TSSC4
ABCF3
RCBTB2
TFB2M
CNST
SF3A3
DMAP1
ZBTB45
LUC7L2
TOLLIP
FMC1-LUC7L2
FMC1
SAYSD1
NDUFS3
KBTBD4
RBBP5
NOB1
NME1-NME2
NME1
GTF3A
CKLF-CMTM1
CKLF
RAD21
PPIP5K2
GIN1
AURKAIP1
MRPL45
SMG7
U2AF2
RPP38
TIGD6
HMGXB3
ITGB3BP
EFCAB7
MCRS1
PITPNB
MED23
PDRG1
YIPF2
TIMM29
CENPBD1
TRMO
SPPL2B
LSM7
UBE3B
LOC100289561
CSTF2T
ZSCAN22
NSA2
GFM2
RSPH3
LOC100287896
LIPT2
SCAND1
DCP1A
MRPL21
IGHMBP2
TMED4
POM121
REXO4
ALKBH5
TATDN3
NSL1
SCNM1
LYSMD1
HINT1
MYL5
ATP5ME
PARK7
BMS1
ISY1-RAB43
ISY1
ZNF408
ARHGAP1
SNRPB
KRR1
MOK
ZDHHC6
VTI1A
STK32C
LRRC27
CDK5RAP1
MTBP
MRPL13
MBD1
FAF2
RRP15
UTP3
DNAJC25-GNG10
DNAJC25
FAM122A
FAM120B
HMGB1
USPL1
SLC2A11
UQCC1
NUP214
FBXO31
MAP1LC3B
CACYBP
BRF2
FADD
YEATS4
THAP5
DNAJB9
SRRM1
CCAR2
CBX5
HNRNPA1
MST1
CRB1
RSRP1
ZNF165
SNRNP70
ZNF12
RARS1
ALKBH3
FAM222B
TRUB2
COQ4
DCAF10
TDP2
ACOT13
RTTN
WIPI2
DCAF8
DAGLB
SRSF1
BORCS7
POLR2J3
FAM71E1
EMC10
RBM17
TIGD1
EIF4E2
ATP6V1G1
ASNSD1
ASDURF
SUPT7L
SLC4A1AP
GALK2
COPS2
TNPO3
UROS
BCCIP
SLC33A1
SELENOI
ADGRF3
HBS1L
TAX1BP3
EMC6
WDR4
RALGAPB
SMG9
EIF1AD
BANF1
GTF2H3
EIF2B1
MRPL44
IPO4
USP21
C15orf40
THAP7
MRS2
AP3B1
RTEL1
LMAN2
CSNK1A1
CISD1
IPMK
PREB
SYS1
MTMR9
CIAO3
INTS7
DTL
DYRK1B
ZMPSTE24
MTIF2
ATP5MC2
ING1
DSN1
SUMF2
TACO1
NAT10
SSBP1
RPL37
GABPA
ATP5PF
STS
PUDP
TRIP4
CFAP298-TCP10L
CFAP298
PDCD6IP
TEFM
COP1
WDR83OS
WDR83
EIF2S2
RPL8
KIF22
PPME1
C2CD3
ARF4
TSACC
CCT3
ENTPD6
AP1M1
EIF2S1
ATP6V1D
ZNF770
NOL7
PIH1D2
NKAPD1
PALB2
DCTN5
LINS1
ASB7
EEF1AKMT1
FITM2
C1orf74
RPL26L1
PRRG2
NOSIP
PPP1CB
NUDCD2
HMMR
INTS10
ALG10B
RPS20
NDUFB3
FAM126B
LSM5
TRMT61B
OARD1
NFYA
COX16
PDCD6
MITD1
DSTYK
VPS52
RPS18
PHF23
PEMT
HNRNPL
SLX1B
SLX1A
BOLA2B
BOLA2
INO80B
RUVBL1
GOLGA3
INTS12
GSTCD
PATL1
EIF3E
ZNF668
ZNF646
TTC32
PPIL3
NIF3L1
TAF12
BLOC1S4
GNPAT
C1orf131
LTN1
GDF5
CEP250
INTS2
CYCS
ZC3H8
PPP2R3B
DYNC2I1
C17orf97
AP3S2
PHB2
RRP1
CCDC97
WDR24
FEM1A
NR1H2
FUT8
DDX41
KLHL20
MEMO1
NR1H3
ACP2
BTF3
RBM7
C11orf71
TSR3
GNPTG
ENDOV
SENP1
PFKM
MRNIP
INTS5
TMEM43
CHCHD4
ARPC1A
BOLA2-SMG1P6
FBXW11
IDH3B
SNRPB2
VPS13A
CPSF1
MTHFSD
SFSWAP
POLR2J
PEX3
ADAT2
RPTOR
AQR
VCPIP1
C8orf44-SGK3
COA6
MAF1
MED18
INO80C
MTRNR2L8
ARFGAP3
SLC25A53
SLC39A6
TMX3
CCDC102B
BOD1L1
CDC27
RNF149
HDAC4
TMEM222
POLR3F
DZANK1
NPRL3
TMEM230
SLC35A4
APBB3
LAMP1
TFPT
PRPF31
CCDC174
FAM200B
TUT1
WDR13
GTF2H4
GMCL1
CCT5
ATPSCKMT
NOP16
HIGD2A
USP30
E2F6
VPS4B
NPM1
DPP9
PCIF1
IBA57
ILF3
RTL10
GNB1L
ALG8
RPS14
CGGBP1
C3orf38
KANSL3
HEXA
CHMP2A
NBPF1
CFAP410
DPM3
NAPG
INTS13
FGFR1OP2
TTC30A
HAGH
FAHD1
AAR2
WDR36
WDR11
MRPL1
MTG1
NMNAT1
LZIC
PLEKHA8
ATP5PO
HNRNPA1L2
ZNF461
TMEM115
CLPTM1
CDKL3
KCTD5
SLX4
NUP62
IL4I1
ATF5
MRPL3
SART1
SDHAF3
NDUFA8
MORN5
TSN
C16orf91
POLR3B
MRPL40
HIRA
GRPEL2
CBLL1
B3GALNT2
HINFP
PTPN4
ANO10
ABHD5
PAPSS1
SHBG
FXR2
SLC30A5
ITFG2
AMZ2
RAD23A
NDUFS7
ZNF248
SEC61G
FRA10AC1
RAB5IF
SEPSECS
CHD1
TMEM208
LRRC29
RPL29
DFFB
CEP104
GOLGA1
ASH1L
ZNF2
STOML2
RWDD1
MEIG1
CCNT2
PSMD14
MBTPS2
MRPL48
VPS25
FRG1
EIF5A
TRIM46
KRTCAP2
VPS50
HEPACAM2
SIRT6
ANKRD24
AIP
TRMU
SEC22B
UFC1
RPS26
SMARCD2
PPP6C
MTOR
MRPL16
TMEM242
TM9SF2
KIFAP3
MRPL17
ATG5
PPP1R11
IFT172
RPRD2
DNAJB12
NUDCD3
FKBP1A
EID1
TXNDC9
EIF5B
NUP54
UPF1
DUS1L
EIF3F
YJU2
IPPK
TIMM13
SNRPE
VPS45
NOL8
CENPP
SREK1IP1
CWC27
MTRNR2L2
COX18
VPS13B
AARSD1
S100A13
CHTOP
TTC14
ING4
SRFBP1
SELENOH
EHMT1
SUGCT
MPLKIP
CCNT1
NOL12
GPATCH8
TFG
SAR1B
MAPKAP1
TOMM22
COMMD2
GTF2H2C_2
GTF2H2C
ATP6V0D1
TRDMT1
SEC11A
PPIL1
TXNL1
FAM133B
HASPIN
MOCS2
EMC4
MINK1
TMEM104
NAT9
MED4
TEDC1
RPL37A
NGDN
AIFM1
ZNF692
PSMA2
MRPL32
FAM228B
SF3B6
HEMK1
ABCB10
RFXANK
BORCS8
SMIM14
ELP6
SCAF11
TRIM37
GTF2H2
PPAN-P2RY11
PPAN
PSMF1
ZNF473
VRK3
MCAT
GATD3B
GATD3A
MTRF1
PCGF1
PAPOLA
TMA16
TIMM9
KIAA0586
CDC7
UBN2
RPLP2
TMX1
RSL1D1
TIA1
FIP1L1
ZNF638
PSD
GID8
DIDO1
SPG11
CCDC150
NUP50
DHX34
YIPF5
KCTD16
ERCC6L2
SSNA1
ANAPC2
MAPKAPK5
GZF1
EXD2
SNRPD3
GUCD1
EIF3K
MAP4K1
ZC3H3
C17orf75
UBOX5
FASTKD5
BNIP1
ANGEL2
ALG10
UGGT2
PUM3
ERCC5
HNRNPH3
PBLD
SMG8
FBXO22
PRCC
NDUFA12
GTPBP10
PPP1R12B
PPWD1
CENPK
PUS10
PEX13
ZNF251
ARMC2
VPS33A
MAN2C1
TMEM199
POLDIP2
TTC13
GEMIN7
ATP6V1C1
DHDDS
ZNF561
PWP1
CCDC59
SCAMP3
NUP153
PRELID3B
NUDT5
CDC123
SEC13
MRPL53
PSMD6
TMEM258
FEN1
RPL38
TERF2IP
KARS1
FAM98B
TOMM7
TSEN2
SUMF1
YBEY
MCM3AP
CASZ1
MPHOSPH10
MCEE
GATB
LAMTOR5
PDXDC1
RPS12
POLR2J2
C1orf53
MRPL20
RFX1
ZNHIT1
PLOD3
CC2D1A
C19orf57
TRAM1
NAA20
LSG1
TDG
CLN5
NUDCD1
MRPS33
NR1D1
GTF3C3
SKIV2L
NELFE
ZMAT2
DNAJC24
DCDC1
ZNF791
ZNF490
SUPV3L1
TOP3B
MKRN2
OTUD7B
CCNI
RBAK-RBAKDN
RBAK
RPS6
CSTF1
AURKA
LANCL2
C2orf74
SF3B2
YY1AP1
DAP3
RMND1
ARMT1
ZNF182
SPACA5
STARD10
PSMA1
SLC24A1
INTS14
STX18
SPNS1
TTC4
FBRS
ZC3H14
ENDOG
NDUFA6
ARPC2
PSME3
ZNF384
TBL3
SLC35B3
PGAM1
NDUFAF5
ESF1
C4orf3
AAAS
DDX39B
PRPF6
SGTA
RAD54L2
CASP2
PDCL3
OAZ3
MRPL9
RPL5
SPOP
COPS7B
ZNF583
SMAD4
RNF6
RPS29
GOLGA4
COX6C
ACAD9
SLC25A51
C12orf73
DHX8
ATAD3A
SELENOT
PCID2
CUL4A
C6orf89
PGRMC2
CC2D1B
POM121C
GPR137
OTULIN
TBCK
AIMP1
PIGF
CRIPT
TMEM41A
MCOLN1
COX6A1
RER1
MORN1
PLS1
SLC39A7
RXRB
APC
TMEM106B
ZSCAN25
MRPL10
LRRC46
WDR43
LARS1
CENPS-CORT
CENPS
ZNF747
CARD8
SNX17
EIF2B4
PCNX3
RAD50
EXOSC4
DAZAP1
DPY19L4
BNIP3
FAM207A
ELOF1
ZKSCAN4
FBXO38
STYXL1
CCDC30
ZMYND12
PPCS
SLTM
CNPPD1
RETREG2
TXN2
BRIX1
PIGL
ZC3HC1
FARSB
HM13
EXOSC2
NSFL1C
GAPVD1
DDX1
MYL12B
SNRPD1
CACTIN
LAS1L
SMN2
SMN1
USF1
MTCH2
RPS13
SEH1L
STAG1
TMED9
SRRM2
MUL1
ZNF133
TSNAX
GOPC
NCBP2AS2
NCBP2
ZC3H15
USO1
SLX4IP
ZC3H10
ATG4C
TMEM209
KLHL18
KIF9
UBA5
ACAD11
C1QBP
EXOSC6
SLC35A3
ANAPC5
RAD51AP1
C12orf4
SLC25A32
DCAF13
OXNAD1
DPH3
TBCB
POLR2I
PRKAB1
WDR5B
ATAD1
RNF14
MFAP3
FAM114A2
CTDP1
HECTD1
SPAST
VPS9D1
TRNAU1AP
NVL
C18orf21
FAM227B
DTWD1
IFTAP
CWC25
THAP12
GVQW3
RSL24D1
TCTA
RHOA
WASHC5
NSMCE2
SPCS1
GLT8D1
HPS5
GTF2H1
SKP1
TMEM175
GAK
DUS2
DDX28
ARF1
EXOSC3
TMBIM6
ZNF180
C5orf24
NDUFC2-KCTD14
NDUFC2
FBXL19
HP1BP3
ZFYVE27
LENG8
TBC1D19
MPDU1
LOC100996842
WDPCP
MDH1
TMEM63A
ZBTB43
TRAPPC4
RPS25
VTA1
NMBR
PRDM4
MRPS22
ZNF26
TRAPPC3
GOSR2
MED15
MFSD4B
ZNF846
ZNF226
BTRC
SMG5
C8orf33
SMU1
STX6
DPAGT1
FBXW4
NANP
POLG
SMARCC1
DDX56
SAP18
WASHC2A