ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025675 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◣ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
PEMT
NME2
SRSF1
SNX25
CFAP97
NME1-NME2
NME1
DRG2
NPM1
AKAP10
ZNF485
METTL1
EEF1AKMT3
G6PC3
NOLC1
HMGA1
SELENOO
VMP1
PTRH2
CCDC86
ODC1
TRIM16
C1QBP
ATAD3A
CAD
NCL
PDCD11
ATP5MD
GID8
DIDO1
LSG1
TENT4A
SLC25A10
RPLP0
GTF3C4
DDX31
GPAM
NOP16
HIGD2A
DHX33
MTHFD1L
SLCO4A1
DIAPH1
GCFC2
FTL
SNRPD1
SGTA
IARS1
SLC35E2A
MAGOHB
SPRYD4
MDN1
SLC35E2B
TMEM33
ZSWIM7
TTC19
SNF8
CLN6
FAF1
MAT2A
RSL1D1
DDX42
CCDC47
GCN1
AASDH
OSGIN1
PSMB2
TBRG4
LARP1
MAN1B1
UBE2K
HSP90AB1
MRTO4
EMC1
HSPA8
UAP1
PIGL
PTDSS2
RAD50
PRKAR1B
PPIA
TRIAP1
ATAD3B
TOMM34
AEN
EPRS1
CENPV
NCBP2AS2
NCBP2
TBL1XR1
SSNA1
ANAPC2
TFRC
SLC5A6
ATRAID
NFE2L2
FARSB
MSTO1
SCAND1
NOC4L
DDX51
DDX21
EIF3M
PLD6
GATAD2A
CBWD5
CBWD3
PPRC1
RBM42
GEMIN7
GARS1
INO80
GPSM3
HNRNPF
ABT1
SMYD2
IFRD2
GAR1
MBD3
CKAP5
MTRNR2L8
CARNMT1
DPH5
PSMG4
PAK1IP1
C6orf52
B9D1
JADE2
EIF5A
SDAD1
HAX1
EEF2K
CBX3
SLC25A33
MED9
ZKSCAN2
PDS5A
YRDC
C1orf122
RPUSD4
FAM118B
OSGEP
APEX1
NAT10
PCID2
CUL4A
RPL18A
TMEM248
RSBN1L
TMEM38A
SMIM7
TMPRSS9
EIF4EBP1
PARG
EEF1A1
WNT2B
ENG
GNPDA1
HAUS5
PINX1
UTP4
DERPC
CHTF8
QSOX2
MRPL15
TRIP6
MLLT1
SPHK1
TRMU
YBX1
CSE1L
ZNF3
UTP18
MBTD1
URB1
SUMF2
MRPL3
EIF3B
RMDN3
FBL
PLK3
GABPB1
SMIM12
PMS2
AIMP2
HDGF
MARVELD1
FAM83G
COX10
MRPS23
CUTC
COX15
NT5M
PARP1
MAPKAPK5
MACROD1
MRPL4
TRPM7
TRMT6
MCM8
PFAS
USP32
PPAN-P2RY11
PPAN
GPX1
FNTA
PNP
TBL3
KMT5B
PWP1
PRPF6
NDUFS1
EEF1B2
YARS1
S100PBP
L3HYPDH
JKAMP
WDR3
GDAP2
TOMM20
PCBP1
RUVBL1
AGPAT5
RRP1B
HSF2BP
ASPSCR1
RBM18
MRRF
DUS3L
HSPA9
SLC2A1
NOTCH2
EBNA1BP2
CFAP57
NR1D1
SCFD2
BAX
RRP9
PARP3
HSCB
CHEK2
RPL36A-HNRNPH2
RPL36A
BTK
GET4
TWNK
MRPL43
C16orf91
SEC14L1
PSMB6
SIRT4
PTP4A2
RPL10A
CWC25
UBTD1
MMS19
PFDN2
NIT1
MACIR
POLD2
ZSCAN22
SEC31A
SLC5A3
MRPS6
NUP50
KEAP1
SECISBP2
ZNF410
LMNA
XPO6
PAXX
RRM1
MTHFD2
CRLS1
MRPS17
SAMM50
KTN1
AATF
URB2
TAF5L
SLC25A45
DNAJC2
DGLUCY
THNSL1
DR1
TAF5
RCC2
CNOT8
BZW2
ANKMY2
LONP1
CATSPERD
PAQR7
RBM28
SIK1B
SIK1
AHCTF1
POLD1
ZNHIT6
TRMT61A
TBC1D15
ATIC
RPS16
NEURL4
ELK4
GPR157
WDR18
C1orf109
B3GNTL1
RRS1
MRPL55
GPR89A
TRAF3
NOL8
CENPP
LDHB
IMP4
CCDC115
BLMH
FOXP4
TOMM7
MRPL2
KLC4
EPM2A
TMEM186
PMM2
TOP3A
SMCR8
SMARCC1
DCAF7
PHF7
BAP1
SLC16A1
VPS52
RPS18
RPE
TATDN1
NDUFB9
TAMM41
GPN3
FAM216A
PAFAH1B2
PPP1R15B
MTRNR2L2
SLC3A2
TIMM23
EIF4A1
ACBD5
MYBBP1A
KCNQ5
XPOT
UBQLN4
LAMTOR2
TFB1M
CLCN7
TTLL4
TSPAN4
RPS21
SLC39A3
SLC19A2
CACNB3
ITPRIPL2
P4HB
COPS3
ZFP36L2
SCD
KHDRBS1
AKAP1
MARS2
KMT2D
MEF2D
TRABD
PPP2R3B
PKP4
CCDC148
CLK2
CTU1
CNOT11
CLUAP1
ZNF460
SLC29A1
METAP1
GLRX2
PPP1R13L
POLR1G
SSB
ELP3
SOD2
PRPF3
WTAP
ABLIM1
CAPZA2
TBC1D22A
DUSP12
WDR7
TBK1
POGK
HEATR1
CCT8
RCC1
DUS2
DDX28
EIF4E
MET
IFI27L1
DDX24
GTF3A
IPO4
UBR5
CYCS
ZNF639
ARSG
SLC16A6
TBL1X
SHQ1
ACYP2
METTL8
DCAF17
PSME4
THRAP3
EIF4H
SUPV3L1
SLC39A14
DYM
NLE1
MPZL1
SS18L1
MIDEAS
ITGB3BP
EFCAB7
ANKRD40
PLAC8
DLAT
NSMCE4A
CBWD6
TVP23B
RSAD1
HDAC7
GTPBP4
UTP11
PES1
TUBA1C
YIPF3
POLR1C
USP22
ADORA2B
PHLDB1
RBBP5
SFSWAP
HNRNPL
C10orf95
USP16
NTMT1
ZNF202
PDHB
USO1
AP2B1
SLX1B
SLX1A
BOLA2B
BOLA2
SPTSSA
CHD1L
FBXL4
CCDC12
LRRC58
DNAJC19
ZNF787
USP36
CNBP
NOP58
PFN2
HK2
PRR7
EIF3CL
EIF3C
UNKL
MRM3
GLOD4
ATXN2
MBNL1
TARS1
MAP4
P3H4
FKBP10
RPL8
STAMBPL1
VPS9D1
RPS23
ATP6AP1L
CLNS1A
DNAJC11
HS3ST3A1
FABP5
RRP1
SLC35E1
DIMT1
MMAA
MRPL44
GOLIM4
TMA16
DPH1
ANKRD27
GDI2
PEBP1
UBAC1
TNPO2
RPL38
XPO5
POLH
ZC3H15
CELSR3
ACBD6
LRRC59
METTL5
HDHD5
HES4
USP14
SPRED1
PRELID3A
SEC61G
LDAH
TM2D3
UBALD1
LUC7L2
NOXA1
UBFD1
EARS2
FRA10AC1
NOL10
MXI1
ZNF121
JPT2
FOSL2
SUGP2
ARMC6
SNRPE
FOXJ3
CEP192
EEA1
COA1
TMEM268
TCTEX1D4
BTBD19
RAN
NUDT5
CDC123
COA8
BAG5
SH2B1
TUFM
ICE2
PRMT3
MCIDAS
CTBP2
MRPL24
DNTTIP2
FAM227B
DTWD1
RPL14
SYNCRIP
TERT
PHC2
FARSA
SH2B2
PSMC5
FTSJ3
MAK16
UTP14A
AK2
CEBPZ
ERLIN2
GOLGA3
PMPCA
ENTR1
FAM98A
NUP153
TUBGCP6
TAF4B
NRAS
PIK3R3
SP3
ATP5F1E
ZZZ3
DHX37
TIMM44
RIOK1
CAGE1
NFIC
CHD1
SRD5A1
HINFP
B3GAT3
NFAT5
DKC1
PUS1
SPIN3
TRUB2
COQ4
SLC9B2
FKTN
OPA1
UCHL3
COMMD6
RNASEH1
TRIP13
BRD9
KAZALD1
PBRM1
GNL3
CTSC
KDM3A
FANCD2
SOS1
RPIA
CDC25C
FAM53C
BIRC5
ZNF598
CHKA
SF3A3
PGP
NT5C3A
CLUH
MAFK
ZC3H8
UBA52
POLI
NOTCH2NLB
SNAP47
JMJD4
ATXN1L
MPHOSPH6
DDX18
DDI2
ADPGK
ING5
NOM1
ASAP1
PSPH
CCT6A
COPS6
TRIB1
PHLDA2
PPM1G
CTPS1
CBWD1
RPS8
B4GALT7
ZBTB44
APP
ZWILCH
RPL4
NACA
ATG101
SHLD2
GLUD1
CAST
NOTCH2NLA
ERCC6L2
MTG1
RPS6KB2
UBE2G2
CNDP2
SUCLG2
HMGB1
USPL1
C8orf33
TAF13
UBB
THADA
RNF139
TRAP1
RIOX2
MRPL45
TAOK2
CENPF
PAAF1
COA4
RAD52
NQO1
TFAP4
MRPL21
IGHMBP2
RCOR3
DPAGT1
WDR55
GEMIN6
DRAM1
SUPT3H
GNL2
POPDC3
WDR26
NELFCD
HSPA4
CLPTM1L
WDR36
COPS7B
CFAP20
ITPA
LTV1
CIAO3
SRRM2
PET117
KAT14
MRPL27
EME1
C12orf57
AGAP3
TBCE
PRPF4
CDC26
UTP15
ANKRA2
MRPL10
LRRC46
NHP2
ZBTB24
PDP2
NOB1
PPAT
PAICS
RPS5
DDX5
RASSF1
NDUFC1
NAA15
WDR4
TMCO1
NUP214
TRUB1
TRA2B
SPCS3
SPTY2D1
SEC24D
TMEM41A
CAMSAP2
PTDSS1
MTERF3
WDPCP
MDH1
TXN
RNF168
RPL30
TRAF7
ZNF84
HSPE1-MOB4
HSPE1
HSPD1
EMC8
COX4I1
SPOUT1
COX20
RCOR1
ZNF165
TTC7A
MCFD2
TEX2
TIPIN
WDR43
PGRMC2
ATG5
NUP133
PUM3
NUDT9
UBE2S
PRPF19
LDLRAD3
MCTS1
EMP3
STYXL1
GBA
G3BP1
RPLP2
SLC25A37
EIF3A
POLE3
C9orf43
PRMT1
DDX59
SLC7A5
GALNT7
DNAJC9
SRSF2
MFSD11
CAAP1
C19orf48
GNA13
ZNF286A
MAGOH
STARD7
JMY
SPOPL
IMP3
STK19
DXO
SMG8
COPS8
ENO1
RNF145
MRPS15
PSD3
CEP83
LANCL2
SRSF11
DCP1A
LRRC40
CBWD2
NOCT
TBC1D23
YWHAG
PDSS1
TESMIN
CAPRIN1
UTP3
FLCN
RALGDS
CACUL1
RPUSD2
FOSL1
TRMT61B
POM121
RPS11
ABCC10
CCT2
EPOP
TIMM13
HM13
MTBP
MRPL13
MCMBP
MDM4
SLC25A32
DCAF13
PHIP
MAPK8
ZNF496
BTF3
ALKBH2
NOTCH2NLC
SRSF10
C10orf88
ZNF692
DDX19A
ZBTB37
ZC3H18
DDX49
COPE
YKT6
SPG21
TBCB
POLR2I
KRI1
SERBP1
LEO1
GFM1
ZNF785
MTA2
RASA1
WTIP
ELOA
SMIM19
SLC20A2
DPY19L3
SLC22A18
TUBB6
RPP38
RANBP3
SETD5
SELENOH
PAFAH2
PIH1D2
NKAPD1
DDX50
PANK2
PNPO
NAA38
CYB5D1
PTBP1
WASHC2C
FAM156A
FAM156B
RPS13
FAM98B
PPP4R3A
SMC3
FAM20B
B4GALT2
CNIH3
ABCB10
EBAG9
SMN2
SMN1
TSEN54
CASKIN2
TRIM27
RPS19
ZFP91
SSU72
CHERP
SUGCT
MPLKIP
SRSF7
DDX10
PVR
EIF4B
TET3
DECR2
ST3GAL4
TAGLN2
ZNF593
C1orf232
MRPL20
KLHL18
KIF9
RPS27
PRIM2
SSR2
HNRNPH1
UBE2D3
SRRD
HPS4
ZNF497
NUP54
CISD2
GYG1
DCUN1D5
BCAT1
ZNF205
ARHGAP11A-SCG5
ARHGAP11A
WSB2
S100A2
HIPK3
BIRC6
ADAR
MIEF1
HNRNPDL
ENOPH1
CDC16
LAMC1
RGMB
LOC100289561
SNX5
MGME1
RSL24D1
WDR74
INO80B
UFSP1
SLC35F5
R3HDM2
ADCK1
ARRDC2
SLC31A1
FKBP15
MAPK6
CALM2
TRIM16L
JAGN1
PPP4R3B
MFSD4B
FUS
MFAP2
RTKN
DCAF8
JOSD2
NOP9
DHRS1
MRPL40
HIRA
TRIP4
PDIA5
TMEM116
ERP29
PEF1
PIAS2
KATNAL2
AHI1
ZNF143
TTC26
IPO7
COLEC11
ZNF131
PRDM15
SCRIB
LLPH
MTPAP
C5orf24
REXO4
TRMT2A
RANBP1
QTRT1
H4C15
H4C14
GNAT2
AMPD2
DYNC2I2
RPF2
SERTAD2