ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025675 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◣ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
PEMT
NME2
SRSF1
SNX25
CFAP97
NME1-NME2
NME1
DRG2
NPM1
DUX4
AKAP10
ZNF485
EEF1AKMT3
METTL1
CYP27B1
LSM12
G6PC3
NOLC1
HMGA1
SELENOO
VMP1
PTRH2
CCDC86
ODC1
TRIM16
C1QBP
ATAD3A
SLC5A6
CAD
ATRAID
NCL
AP5S1
PDCD11
ATP5MD
GID8
DIDO1
LSG1
TENT4A
SLC25A10
MRPL12
RPLP0
GCN1
GTF3C4
DDX31
GPAM
NOP16
HIGD2A
DHX33
MTHFD1L
SLCO4A1
DIAPH1
GCFC2
FTL
SNRPD1
THOP1
SGTA
IARS1
SLC35E2A
MAGOHB
HNRNPU
SPRYD4
MDN1
SLC35E2B
TMEM33
ZSWIM7
TTC19
SNF8
GET4
CLN6
FAF1
CDKN2C
MAT2A
RSL1D1
HSPB1
DDX42
CCDC47
AASDH
OSGIN1
PSMB2
TBRG4
LARP1
SPATC1
UAP1L1
MAN1B1
UBE2K
HSP90AB1
MRTO4
EMC1
SLC35B2
HSPA8
UAP1
EAPP
PIGL
NCOR1
SYT5
TMEM107
VAMP2
PTDSS2
ANO9
RAD50
PRKAR1B
PPIA
TRIAP1
COX6A1
ATAD3B
TOMM34
STK4
RIN1
AEN
DNAAF4
ADORA2B
EPRS1
CENPV
NCBP2AS2
NCBP2
TBL1XR1
SSNA1
ANAPC2
TFRC
PMP22
NFE2L2
FARSB
MSTO1
SCAND1
NOC4L
DDX51
DDX21
EIF3M
PLD6
GATAD2A
CBWD5
CBWD3
PPRC1
IGF2BP3
RBM42
ZNF296
GEMIN7
GARS1
PMF1-BGLAP
PMF1
INO80
PBX2
GPSM3
HNRNPF
ABT1
SMYD2
NAA80
IFRD2
HYAL3
KDM6B
GAR1
MBD3
PTMA
CKAP5
MTRNR2L8
CARNMT1
DPH5
PSMG4
PAK1IP1
C6orf52
B9D1
JADE2
GTF3C5
GPS2
EIF5A
OLFM2
HPX
SDAD1
HAX1
EEF2K
HNRNPA2B1
CBX3
SLC25A33
MED9
ZKSCAN2
PDS5A
YRDC
C1orf122
PIP4P1
OSGEP
APEX1
RPUSD4
FAM118B
NAT10
PCID2
CUL4A
RPL18A
TMEM248
NCR3LG1
RSBN1L
VPS9D1
TMEM38A
SMIM7
TMPRSS9
EIF4EBP1
PARG
EEF1A1
WNT2B
ENG
GNPDA1
HAUS5
PINX1
UTP4
DERPC
CHTF8
QSOX2
MRPL15
TRIP6
SRRT
MLLT1
SPHK1
TRMU
MAP2K3
YBX1
CSE1L
ZNF3
COPS6
UTP18
MBTD1
URB1
SUMF2
MRPL3
EIF3B
RMDN3
GCHFR
TMEM167B
FBL
PLK3
TCTEX1D4
BTBD19
GABPB1
SMIM12
PMS2
AIMP2
MRPL24
HDGF
MARVELD1
FAM83G
COX10
CDH16
MRPS23
CUTC
COX15
GSN
NT5M
PARP1
MAPKAPK5
MACROD1
MRPL4
TRPM7
TRMT6
MCM8
PFAS
USP32
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
GPX1
FNTA
PNP
RPS2
RNF151
TBL3
NOXO1
KMT5B
SAMD10
PWP1
PRPF6
NDUFS1
EEF1B2
YARS1
S100PBP
L3HYPDH
JKAMP
WDR3
GDAP2
TOMM20
PCBP1
TAF12
RUVBL1
AGPAT5
RRP1B
HSF2BP
ASPSCR1
ANKRD60
RBM18
MRRF
PRR22
DUS3L
HSPA9
SLC2A1
AHNAK
NOTCH2
EBNA1BP2
CFAP57
NR1D1
SCFD2
BAX
RRP9
PARP3
HSCB
CHEK2
RPL36A-HNRNPH2
RPL36A
BTK
PABPC4
TWNK
MRPL43
LZTS2
UNKL
C16orf91
SEC14L1
VMO1
PSMB6
GLTPD2
SIRT4
PTP4A2
RPL10A
CWC25
UBTD1
MMS19
PFDN2
NIT1
MACIR
POLD2
ZSCAN22
THAP9
SEC31A
SLC5A3
MRPS6
NUP50
KEAP1
VIM
SECISBP2
CKS2
ZNF410
LMNA
EPB41
TOP3A
SMCR8
XPO6
PAXX
LCNL1
CLIC3
RRM1
MTHFD2
CRLS1
MRPS17
SAMM50
KTN1
AATF
SLC25A45
FRMD8
PSMC2
DNAJC2
URB2
TAF5L
DGLUCY
THNSL1
DR1
TAF5
RCC2
FAXDC2
CNOT8
BZW2
ANKMY2
LONP1
CATSPERD
PAQR7
RBM28
SIK1B
SIK1
CFAP251
AHCTF1
POLD1
NR1H2
ZNHIT6
TRMT61A
CKB
TBC1D15
ATIC
SUPT5H
RPS16
YBX2
NEURL4
ACAP1
ELK4
GPR157
MANBAL
WDR18
CDCA8
C1orf109
B3GNTL1
RRS1
ADHFE1
MRPL55
TMEM250
GPR89A
TRAF3
NOL8
CENPP
IMP4
CCDC115
LDHB
BLMH
FOXP4
TOMM7
MRPL2
KLC4
CUL7
EPM2A
TMEM186
PMM2
SMARCC1
DCAF7
PHF7
BAP1
SLC16A1
VPS52
RPS18
B3GALT4
RPE
TATDN1
NDUFB9
TAMM41
GPN3
FAM216A
PAFAH1B2
PPP1R15B
MTRNR2L2
MSH3
DHFR
SLC3A2
TIMM23
CD68
EIF4A1
ACBD5
GGT6
MYBBP1A
KCNQ5
XPOT
TBC1D24
NTN3
UBQLN4
LAMTOR2
TFB1M
CLCN7
TTLL4
TSPAN4
POLR2L
RPS21
SLC39A3
SLC19A2
CACNB3
ITPRIPL2
P4HB
ARHGDIA
ANTKMT
HAGHL
CCDC78
XPO1
COPS3
ZFP36L2
SCD
KHDRBS1
AKAP1
MARS2
RHEBL1
KMT2D
MEF2D
TRABD
PPP2R3B
PKP4
CCDC148
HCN3
CLK2
CTU1
CNOT11
CLUAP1
C16orf90
ZNF460
SLC29A1
MYMX
METAP1
GLRX2
PPP1R13L
POLR1G
SSB
NUGGC
ELP3
SOD2
PRPF3
WTAP
ABLIM1
CAPZA2
SPDYE16
TBC1D22A
DUSP12
WDR7
TBK1
POGK
HEATR1
MAP3K7CL
CCT8
RCC1
DUS2
DPEP2NB
DDX28
EIF4E
MET
IFI27L1
DDX24
GTF3A
TM9SF1
IPO4
UBR5
CYCS
ZNF639
ARSG
SLC16A6
TBL1X
SHQ1
ACYP2
METTL8
DCAF17
PSME4
THRAP3
EIF4H
SUPV3L1
MPZL1
SLC39A14
UNC45B
NLE1
DYM
SREBF1
MIDEAS
SS18L1
PSMA7
ITGB3BP
EFCAB7
ANKRD40
PLAC8
DLAT
NSMCE4A
CBWD6
TVP23B
RSAD1
HDAC7
GTPBP4
UTP11
FHL3
PES1
TUBA1C
ACR
YIPF3
POLR1C
LRRC73
USP22
PHLDB1
RBBP5
SFSWAP
HNRNPL
USP16
RWDD2B
C10orf95
NTMT1
C9orf50
ZNF202
PDHB
USO1
PEX12
AP2B1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
CORO1A
SPTSSA
CHD1L
COL1A1
CCDC116
FBXL4
NBEAL2
CCDC12
LRRC58
PARP16
DNAJC19
PRR7
ZNF787
USP36
CNBP
NOP58
PFN2
HK2
EIF3C
EIF3CL
TUFT1
MRM3
GLOD4
ATXN2
MBNL1
TARS1
MAP4
P3H4
FKBP10
ZNF34
RPL8
ZNF517
STAMBPL1
RPS23
ATP6AP1L
CLNS1A
SPAG9
METTL15
KIF18A
DNAJC11
HS3ST3A1
FABP5
RRP1
IPO11
DIMT1
SLC35E1
MMAA
MRPL44
GOLIM4
TMA16
RRM2
RTN4RL1
DPH1
RGS9BP
ANKRD27
GDI2
PEBP1
UBAC1
TNPO2
IFI16
TTYH2
RPL38
XPO5
POLH
UBR3
METTL5
ZC3H15
CELSR3
ACBD6
LRRC59
HDHD5
SLC2A5
HES4
USP14
SPRED1
PRELID3A
UBALD1
SEC61G
LDAH
TM2D3
LUC7L2
NOXA1
UBFD1
EARS2
FRA10AC1
NOL10
MXI1
ZNF121
JPT2
FOSL2
CRIM1
SUGP2
ARMC6
SNRPE
MPDU1
LOC100996842
FOXJ3
CEP192
EEA1
COA1
TMEM268
RAN
NUDT5
CDC123
COA8
BAG5
SH2B1
TUFM
ICE2
PRMT3
MCIDAS
CCNO
CTBP2
CALR
DNTTIP2
FAM227B
DTWD1
RPL14
SYNCRIP
TERT
PHC2
CCDC197
FARSA
SH2B2
PSMC5
FTSJ3
MAK16
UTP14A
AK2
CEBPZ
ERLIN2
GOLGA3
PMPCA
ENTR1
FAM98A
NUP153
HDAC10
TUBGCP6
TAF4B
NRAS
PIK3R3
SP3
ATP5F1E
ZZZ3
DHX37
BRI3BP
TIMM44
RIOK1
CAGE1
NFIC
CHD1
SRD5A1
HINFP
ROM1
EML3
B3GAT3
NFAT5
DKC1
PUS1
SPIN3
TRUB2
COQ4
SLC9B2
FKTN
TRIOBP
COL19A1
OXCT1
OPA1
MNT
UCHL3
COMMD6
RNASEH1
TRIP13
BRD9
P2RX2
LRCOL1
FCGR3A
KAZALD1
PBRM1
GNL3
CTSC
KDM3A
FANCD2
SMARCD2
SOS1
SINHCAF
RPIA
FAM53C
CDC25C
BIRC5
ZNF598
NPW
CHKA
PGP
MLST8
BRICD5
E4F1
SF3A3
NT5C3A
CLUH
MAFK
ZC3H8
UBA52
POLI
NOTCH2NLB
SNAP47
JMJD4
ATXN1L
MPHOSPH6
DDX18
DDI2
SEPTIN9
ADPGK
ING5
ASAP1
NOM1
PSPH
CCT6A
SOX12
TRIB1
PHLDA2
TMED9
B4GALT7
PPM1G
CTPS1
CBWD1
RPS8
ZBTB44
APP
ZWILCH
SNAPC5
RPL4
NACA
ATG101
SMIM41
ANP32B
SHLD2
GLUD1
CAST
NOTCH2NLA
ERCC6L2
MTG1
RPS6KB2
PTPRCAP
UBE2G2
CNDP2
SUCLG2
HMGB1
USPL1
C8orf33
TAF13
UBB
JAG1
THADA
RNF139
TRAP1
UBC
MID1IP1
RIOX2
MRPL45
KIF5C
TAOK2
CENPF
PAAF1
COA4
RAD52
NQO1
TFAP4
CACNA1S
ASCL5
MRPL21
IGHMBP2
RCOR3
H2AX
DPAGT1
C2CD2L
WDR55
DND1
GEMIN6
DRAM1
SUPT3H
GNL2
POPDC3
SNU13
WDR26
ITPA
DDRGK1
NELFCD
HSPA4
CLPTM1L
DPP9
WDR36
PDE6D
COPS7B
CFAP20
DOCK5
LTV1
CIAO3
PTPN6
C12orf57
SRRM2
PET117
KAT14
PHLDA3
MRPL27
EME1
TMUB1
FASTK
AGAP3
TBCE
NUDT1
MRM2
PRPF4
CDC26
UTP15
ANKRA2
OSBPL7
MRPL10
LRRC46
NHP2
PDP2
ZBTB24
DGKB
WWP2
NOB1
PPAT
PAICS
POLG2
DDX5
RPS5
RNF225
ZMYND10
RASSF1
TNRC18
TUSC2
LOC100129484
KLC1
SLC2A4RG
LIME1
NDUFC1
NAA15
ITGA3
MME
WDR4
TMCO1
NUP214
PRDX2
TRUB1
TRA2B
ANP32A
SPCS3
JUNB
SPTY2D1
SEC24D
TMEM41A
CAMSAP2
PTDSS1
MTERF3
WDPCP
MDH1
RPL30
TXN
RNF168
TRAF7
RAB26
ZNF84
HSPE1-MOB4
HSPE1
HSPD1
ZC3H12A
EMC8
COX4I1
SPOUT1
COX20
RCOR1
ZNF165
OR1F12
TTC7A
MCFD2
TEX2
LIMS1
TIPIN
TMEM109
PRPF19
WDR43
PGRMC2
ATG5
NUP133
PUM3
NUDT9
UBE2S
EMP3
CCDC114
LDLRAD3
MCTS1
METTL27
TMEM270
STYXL1
GBA
G3BP1
SART3
ISCU
PIDD1
RPLP2
PNPLA2
SLC25A37
EIF3A
POLE3
C9orf43
ALAD
PRMT1
DDX59
SLC7A5
GALNT7
MRPS16
DNAJC9
SRSF2
MFSD11
CAAP1
C19orf48