ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2188684 | IMR-90
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◣ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

ADI1
ANKRD26
STK32C
LRRC27
PHF12
SPRTN
EXOC8
NBEAL2
CCDC12
RAB35
SMARCA4
SUGP2
ARMC6
N6AMT1
FAM222B
PGP
MLST8
BRICD5
CASKIN1
ENTPD6
BNIP3
POU2F1
C10orf88
DNAJA3
CORO7-PAM16
CORO7
VPS26B
NCAPD3
XRCC5
EID2B
EID2
FAM220A
PRMT2
PRRT2
PAGR1
MAZ
MVP
SAMHD1
ACTN4
ATP6V0E2
SRSF10
NDEL1
TK2
CKLF-CMTM1
CKLF
TOLLIP
MCRS1
GTPBP6
CBX5
HNRNPA1
KHDRBS1
ZBTB17
GTF3A
LONP1
CATSPERD
MTRNR2L8
RCBTB2
APOLD1
CRTC1
NBPF1
TUBD1
RPS6KB1
NPRL3
CENPBD1
SDHA
CCDC127
SYNGR4
SPPL2B
LSM7
VDAC3
ITPA
DDRGK1
SAYSD1
TMEM141
CCDC183
MTRNR2L2
MSH3
DHFR
EEF1AKMT1
FXYD3
KDM8
PRR30
PREB
PRR14
FBRS
DAGLB
OSCAR
NDUFA3
EHMT1
HNRNPL
IFNAR1
DUX4
CBY3
MIS18A
SUMF2
C6orf136
FAM24B
RANBP3
FAM122A
RAD21
MOK
NAGK
PITPNB
CHMP7
HNRNPH1
RAB18
FAM98A
SPOP
POLR2J2
PPP2CA
NELFCD
CXorf38
PATL1
RSRP1
THAP7
USP10
RBM17
TMEM139
CASP2
CDC34
SHBG
FXR2
RAX2
MRPL54
APBA3
HP1BP3
WIPI2
LUC7L2
FMC1-LUC7L2
FMC1
PDRG1
DPF2
XRCC2
CDC7
SOD2
ACAT2
GATD3B
GATD3A
ZNF583
POLRMT
FGF22
ARFGAP3
TMEM250
FAM71E1
EMC10
UBE2M
CHMP2A
SELENOI
ADGRF3
TMEM63B
MRPL14
DLGAP4
PTK2
MYPOP
SLC2A11
PDXDC1
KCNN1
ZC3H8
AMZ2
SARS1
POLR2J
MRFAP1L1
BLOC1S4
MRPL45
CHD1
MAP2K7
ZMYM4
NDUFA8
MORN5
ALKBH5
LOC100287896
LIPT2
PALB2
DCTN5
SAFB
SAFB2
SMIM11B
SMIM11A
DYNC2I1
WWP2
NOB1
ZNF12
SLX4
OARD1
NFYA
GMCL1
STX1A
XPO5
POLH
HEXIM1
SMG9
CAPZA2
RPL36
MICOS13
HSD11B1L
CCNT2
TOPORS
SMIM27
NUDCD2
HMMR
HASPIN
CCNQ
C8orf48
LRPAP1
WDR4
POLA2
MTCH2
TAX1BP3
EMC6
RABIF
FUT8
PTTG1IP
CYTH1
NUP50
ESRRA
CATSPERZ
HINFP
CNOT4
AP3B1
KCTD13
YEATS4
SPDYE6
LOC100289561
THAP5
DNAJB9
SNAP47
JMJD4
POLR2J3
MAPKAP1
USF2
RNF32
CCSER2
USO1
IQCC
DCDC2B
CCDC28B
UPF1
CLIP4
GSX2
MAMSTR
NANP
MSL2
SLC30A4
DCAF8
CLN8
BANP
RRP1
PPME1
C2CD3
RGPD2
RGPD1
CALR
RAD23A
DFFB
CEP104
CC2D1A
C19orf57
LIG4
ABHD13
SMIM14
PPP6R1
ABCF3
ZBTB14
FAM120B
SCAF11
MTHFSD
SPDYE14
SPDYE10P
UAP1L1
MAN1B1
ABCA3
MAP1LC3B
FBXO31
PAPOLA
TIGD6
HMGXB3
RNF149
GPI
TMEM63A
LEFTY1
PIAS4
SH3YL1
ACP1
GNPTAB
RPP38
ACBD7
ZNF768
ZNF747
RALGAPB
CEP20
NUP107
GZF1
SREBF1
SRSF1
DNMT1
HINT1
TMED4
DDX56
TDP2
ACOT13
WRNIP1
MYLK4
ZMYM1
COL23A1
FAM200B
TDRD7
MBD1
CXXC1
KDM3A
RTL10
GNB1L
ENDOV
FADD
DHDDS
VPS13A
ASNSD1
ASDURF
SBNO1
LINS1
ASB7
STS
PUDP
TMEM104
NAT9
HEATR3
STX8
CFAP52
ZNF576
IRGQ
SRD5A1
MIDN
CBARP
ATP5F1D
ROPN1L
UGGT2
ZNF248
ZNF652
UROS
BCCIP
POFUT2
SELENOT
GOPC
INTS13
FGFR1OP2
NAPB
ARPC2
DTX2
SNRNP70
TMEM70
ELOC
IPMK
CISD1
FZR1
DOHH
MKNK2
SPECC1L
COQ3
LRFN3
UIMC1
INTS7
DTL
EID1
APC
ZNF473
VRK3
PINK1
BCAT1
TXNL1
CCT5
ATPSCKMT
CRB1
MINK1
AURKB
NUP62
IL4I1
ATF5
PCIF1
CCDC106
U2AF2
MRS2
WWP1
TAOK2
TRMO
TENT4A
PVR
SSH1
GABARAP
PHF23
DVL2
SMARCC1
BSN
UBL4A
LAGE3
TBC1D7-LOC100130357
TBC1D7
MORF4L1
CTBP1
MPHOSPH6
RELA
USP21
PPOX
UFC1
GDF5
CEP250
HBS1L
ANO10
ABHD5
PUSL1
ACAP3
SCAPER
TFAP2A
TIA1
PCYOX1
GOLGA1
TMEM120B
ZNF526
DEDD2
ADAM10
GPATCH8
PUM2
PLEKHA8
INTU
MRPL55
SIN3B
TRIM39-RPP21
TRIM39
CDC42BPB
SEC16A
C9orf163
KIFAP3
SCML1
PRELID3B
THOC3
PPA1
TCF25
DYRK1B
WDR18
MTG1
ARMC2
PPAN-P2RY11
PPAN
ANGPTL6
SHFL
SPEN
KATNIP
GTF3C1
PAPSS1
VARS2
GTF2H4
ERCC6
P3H1
PPP1CB
TMEM109
PRPF19
CENPS-CORT
CENPS
RFXANK
BORCS8
KIF6
UPF2
EPS15L1
RBBP7
TCTA
RHOA
FRG2
E4F1
SEH1L
ALG8
C8orf37
MAGI1
SPATA20
GET1-SH3BGR
GET1
EPN3
TRAM1L1
PPP2R3B
TRIAP1
COX6A1
OPA1
MYL5
ATP5ME
TFB2M
CNST
UTP18
MBTD1
NFXL1
PIGX
CEP19
NF1
SPATA4
GRB2
GAA
ZFAND3
SLC39A10
XPO7
DOK2
ZNF329
FKBP1A
MBD3
WDR13
TRAM1
ZDHHC16
EXOSC1
ZNF667
ING1
CARS2
NADK
NDUFS6
MRPL36
C1orf74
SHC2
TRIM37
PRPF39
CIPC
FBXO48
APLF
TIGD1
EIF4E2
TERF2IP
KARS1
C11orf80
HSF1
BOP1
COP1
NAPG
MFSD4B
CCDC130
C15orf40
CAPN7
DHX34
C5AR2
CCDC150
BIRC6
SNURF
SNRPN
TMEM182
MFSD9
ZNF664-RFLNA
ZNF664
CCDC92
CCDC93
RAB1A
CDC42EP4
SOS1
HSP90AA1
SLC30A5
ZHX3
DNAJC28
PTBP1
C17orf97
WDR5B
PAXIP1
BCAR1
SLC35B3
FAM227A
CBY1
LRBA
KANK1
SMAP2
MARS2
MRNIP
URGCP
UBE2D4
MRPL24
HDGF
SRRM1
ZNF638
PRDM4
ALAS1
TBC1D32
NR1D1
THOP1
SGTA
MAP2K2
PTPN4
LAMP1
MRPS18C
HELQ
AKAP1
TMEM209
SSMEM1
C19orf81
PBLD
HNRNPH3
DENR
ERCC6L2
NPM1
SPDL1
SLC39A7
RXRB
RING1
HSD17B8
SSNA1
ANAPC2
SUPT5H
RPS16
CACYBP
SLC25A11
RNF167
PFN1
STYXL1
CDC5L
SKA3
MRPL57
COL11A2
CDC20
GP1BA
THAP11
RPS2
RNF151
NUDT1
MRM2
SS18L2
SEC22C
PUF60
STXBP4
COX11
SRCAP
LOC730183
RPL10A
TBL3
SLC35E2A
ZZZ3
TIPIN
MAD1L1
CCDC86
BTBD10
MARCHF7
COPB2
NOC4L
DDX51
RPS19
UNG
ALKBH2
C6orf89
TAS1R1
NOL9
NOP14
GRK4
TRMT61B
COQ9
CIAPIN1
NME1-NME2
NME1
RPS11
RPL13A
EIF2D
RPL12
LRSAM1
TOMM20
TUBGCP5
SLC15A4
COASY
TMEM79
SMG5
NCAPG
ECHS1
MAGOHB
ARF3
QRICH1
UHRF2
PARK7
TOR1AIP2
TOR1AIP1
TBC1D5
MPC2
DCAF6
TMEM18
POP7
MLX
TAOK1
XPC
LSM3
MAP3K7CL
CCT8
C5orf24
NAA35
GPAM
CWC25
PPP4R3B
SLC35E2B
RPS7
WDR73
NMB
ZNF48
ANKFY1
RPS6
ASXL1
CCNC
TMCO1
HSD17B1
NUP214
RPL17-C18orf32
RPL17
C18orf32
PRDX1
ZFP91
LPXN
NCOA4
SPDYE7P
POM121
RFC5
SH3GL1
CHAF1A
SCAMP5
GPBP1
RBM42
ERGIC2
MED1
CDK12
ZBTB2
AKAP11
MAK16
PURA
JOSD2
ASPDH
HAUS5
RBAK-RBAKDN
RBAK
RPS28
NDUFA7
ZNF286A
GPATCH3
CAND1
TTC32
NOL11
TRIP6
SRRT
NAA38
GID8
DIDO1
KAZALD1
DNAJC27
ZNF771
AURKAIP1
NOXO1
FSIP1
RPL27A
SMIM10L1
PRH1-TAS2R14
TMEM88
CYB5D1
HSPA4
UBR3
METTL5
CFAP70
GAS8
DBNDD1
SLC26A8
MAPK14
DBR1
ATF2
SNX5
MGME1
FAM135A
TTC23
LRRC28
GPS2
EIF5A
VMAC
NDUFA11
DARS1
NKTR
SPEGNB
GMPPA
PSMD5
EHD1
AHCTF1
LTV1
ETFA
MRM3
GLOD4
IREB2
CEP350
UBE2D3
MMS22L
UTP25
ICMT
HES3
MATR3
EIF5
PMF1-BGLAP
PMF1
NOP16
HIGD2A
STRIP1
RAB33B
ATXN7L2
PEMT
SIRT5
FASTKD2
ELOVL1
EIF4A3
PSMB2
SYS1
PEX12
AP2B1
SUGP1
MAU2
MAPKAPK5
HERC1
SHPRH
RBM15
ATAD3A
POLDIP3
MAP3K7
RSL1D1
EFHC1
DUSP15
KIAA1191
ARL10
CYCS
SURF2
SURF1
RPL7A
MED22
SEC62
HSBP1
SLC25A4
SEPTIN7
RPS15
RCC1
CSDE1
VMP1
PTRH2
TMEM43
CHCHD4
FAM76A
CNP
SCAND1
ZNF34
RPL8
CUL3
ZBTB45
GTF2H3
EIF2B1
ZCCHC14
NUF2
MBTPS1
NFYC
MRPS7
MIF4GD
GGA3
LANCL2
WDR43
DHX37
BRI3BP
DSN1
MICOS10-NBL1
MICOS10
AASDH
ZBTB6
RC3H2
NBPF3
ZNF346
KIF5A
DCTN2
ZNF517
SF1
DRG2
RFX1
ADAT1
PXMP2
POLE
THAP1
IPO11
DIMT1
GLCE
BORCS6
CIAO3
TMED9
IKZF5
B4GALT7
ACADSB
PRKDC
MCM4
SPDYE16
CBWD5
SMG7
NUP153
CD2AP
SPAG16
FIP1L1
KIN
ATP5F1C
TMX1
SRP19
SLC25A10
MRPL12
SLC12A2
B9D1
AP2S1
WDR27
C6orf120
KCNJ14
GRWD1
WWOX
RPS29
ARHGAP35
PPM1G
MRPL21
IGHMBP2
CPLANE2
RBPJ
ATF7-NPFF
ATF7
APTX
PHF7
BAP1
TSEN2
ZNF317
COPS3
USP54
MRTFB
RBM26
HSPH1
THADA
YIPF3
POLR1C
LRRC73
UCN2
PFKFB4
TLX2
PCGF1
LBX2
CHUK
DNTTIP2
CCDC77
ADPGK
CLPTM1L
FAF1
CDKN2C
TGOLN2
TRAPPC2
OFD1
UBALD1
RPRD2
RNPC3
MICU2
CBWD3
ZFC3H1
THAP2
KIF5C
CD320
NSUN3
DHFR2
WDR77
ATP5PB
GOLGA8B
CFAP410
NRBF2
TSACC
CCT3
CCNT1
TMEM127
CIAO1
SIPA1L1
EXOSC10
SRSF11
POLR2E
GPX4
PCBP1
AMACR
KIF22
NAT10
MTHFD1
MFSD8
ANKRD13C
ABHD18
ASH2L
ZKSCAN2
SMARCA5
TSSC4
ARF4
CST6
RAD23B
SF3A3
WDR6
YOD1
PFKFB2
GDI2
SNX33
IMP3
DCP1A
TIGD5
EEF1D
MYNN
ACTRT3
LIN7C
TADA3
ARPC4-TTLL3
ARPC4
TRAPPC9
SPRYD4
RBM18
MRRF
PGRMC2
EIF2S2
EIF1AD
BANF1