ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025672 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◣ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MTRNR2L2
MSH3
DHFR
DUX4
MTRNR2L8
PMF1-BGLAP
PMF1
GPAM
PEMT
NME1-NME2
NME1
DRG2
SNX25
CFAP97
MED9
SSNA1
ANAPC2
SLC35E2B
KIF5C
SLC35E2A
DUS1L
PHF7
BAP1
FAF1
CDKN2C
NDUFS7
ZSWIM7
TTC19
TDG
C12orf73
LAMP1
ZNF296
GEMIN7
RRP1
PCBP1
ATP6V0C
AMDHD2
TRIAP1
COX6A1
MRPL21
IGHMBP2
CCDC86
NME2
HEXA
PKN2
WASHC2C
CIAO3
UTP25
TMEM222
POLR1F
GGCX
CNOT6
COPS3
COMMD1
CCT4
EPRS1
FLCN
GTF2H3
EIF2B1
AKAP10
RGPD2
RGPD1
WASHC2A
HAUS5
ZMPSTE24
SLC39A3
PMP22
ANKRD40
PCID2
CUL4A
ADORA2B
RPS2
RNF151
TBL3
NOXO1
PROX2
RPLP0
GCN1
ITGB3BP
EFCAB7
GET4
SRRD
HPS4
PPP2R3B
DENR
TRMT61B
MAGOH
TVP23B
RBM42
SPRYD4
ABT1
ADPGK
ARSG
SLC16A6
RBBP5
EIF2D
JOSD2
ASPDH
LSM12
G6PC3
ATXN1L
RLF
RASD1
PIGL
NCOR1
EAPP
FBXW8
FRA10AC1
RNF166
CTU2
CCNL1
COL23A1
PRKAR1B
EED
MARCHF8
TACO1
MPRIP
MPHOSPH10
MCEE
GARS1
THAP9
SEC31A
DPH5
C8orf33
LANCL2
MRPL15
BAX
RAD54L2
SUPT5H
RPS16
CWC25
OTUD7B
MRPL44
CENPV
NOXA1
LRRC37A3
SNRPD1
MTF2
NT5M
TMED9
B4GALT7
FAM227B
DTWD1
GID4
ATPAF2
PURB
MANBAL
DHX33
ACSF3
SLC39A4
CPSF1
PBX2
GPSM3
CLN6
SF3A3
IARS1
OR6B2
NDUFA10
RANBP2
LRRC59
TOP3B
ZSWIM4
NOP9
DHRS1
PLEKHM3
MDN1
TTC4
ZNF770
AKIRIN1
DPY19L4
GTF2H2C_2
GTF2H2C
PARG
NUP54
MRPL16
COX10
TVP23C
PLD6
MRPS16
DNAJC9
C2CD2
MTHFSD
PEX3
ADAT2
GLRX5
FKTN
CCDC57
MNT
GNPDA1
TMEM41A
NUF2
TSR3
GNPTG
YBX1
RPL6
PTPN11
BTBD10
MAGOHB
MRPL3
SUPV3L1
AHCY
DDX1
UBB
HS3ST3B1
C1orf74
MRPS18C
HELQ
ZSCAN22
SLC31A1
FKBP15
NMNAT1
LZIC
CYCS
PMS2
AIMP2
TBC1D13
SRM
DCAF8
SLC25A33
UTP4
DERPC
CHTF8
PSMF1
POR
UBA1
DGKZ
MYO9B
HAUS8
PINX1
SLC5A6
CAD
ATRAID
TRIP4
PCLAF
RAD50
SEC13
NFAT5
POLG2
DDX5
NFE2L2
DUS2
DPEP2NB
DDX28
CRLS1
CCDC59
MED23
ENPP3
INTS12
GSTCD
FRG2C
SUMF2
NOTCH2NLC
MKRN2OS
MKRN2
SLC39A13
PGAM5
GTF2H2
AP3S2
ZNF84
FAM98B
NUDT9
MRPL55
MRPL4
TEX38
ATPAF1
SSU72
PTOV1
SACM1L
CACUL1
ERLIN2
COA8
BAG5
STK10
EFCAB9
LSG1
TMEM262
C10orf95
CLCN7
SAR1B
PARK7
TFDP1
YAE1
WDHD1
SOCS4
NOTCH2NLB
PEBP1
SAMD13
NOC4L
DDX51
TBL1XR1
CALM1
TATDN3
NSL1
GOSR2
GPHN
SH3GL1
CHAF1A
DCP1A
TIMM23
DRAM2
CEPT1
HNRNPU
FAM156A
FAM156B
NEURL4
ACAP1
PSMG3
SLC25A40
DBF4
TEX261
SMYD4
RPA1
CYREN
AP5Z1
FCGR3A
SPATC1L
CYP20A1
TRIP13
BRD9
NCBP3
CSNK1G2
TRIM25
TAF4B
ZFAND3
ZNF639
ZNF286A
LRRC58
PBK
PPRC1
DNAJC11
USP15
OAZ3
MRPL9
VSIG10
PDS5A
STXBP4
COX11
USP32
EIF3B
VPS37B
RHEBL1
KMT2D
TMA7
CCDC51
ATRIP
ZNF800
DHX40
NBPF1
ETV3
SLC9B1
MAP3K7CL
CCT8
FUS
INTS13
FGFR1OP2
XYLB
RPL10A
MAP4K5
ATL1
SPRTN
EXOC8
PHF12
SRSF10
DNAJA3
CORO7-PAM16
CORO7
N6AMT1
ANKRD26
RAB35
NBEAL2
CCDC12
ADI1
SUGP2
ARMC6
PGP
MLST8
BRICD5
SMARCA4
VDAC3
LUC7L2
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
BANP
PRRT2
PAGR1
MAZ
TUBD1
RPS6KB1
PDRG1
FAM220A
MVP
KHDRBS1
ENTPD6
POLA2
APOLD1
SDHA
CCDC127
PRMT2
CXorf38
RAD21
ACTN4
FAM98A
BNIP3
FAM122A
LONP1
CATSPERD
VPS26B
NCAPD3
SNAP47
JMJD4
HINT1
ZC3H8
SYNGR4
SAYSD1
XPO5
POLH
CENPBD1
MCRS1
TOLLIP
NPRL3
SAMHD1
ATP6V0E2
FAM200B
ITPA
DDRGK1
PPP6R1
EID2B
EID2
MAP2K2
ZBTB17
GTF3A
RPP38
ACBD7
RANBP3
PTPN4
EHMT1
ABCF3
DAGLB
THAP7
RABIF
TMEM250
FAM24B
UAP1L1
MAN1B1
RAX2
MRPL54
APBA3
CHMP7
SPPL2B
LSM7
CBX5
MYPOP
ZNF12
WIPI2
HNRNPH1
USP21
HNRNPL
HNRNPA1
FAM71E1
EMC10
FMC1-LUC7L2
FMC1
ABCA3
PRR30
PREB
PPOX
RAB18
TK2
CKLF-CMTM1
CKLF
MIS18A
NDEL1
NAGK
TMED4
DDX56
IFNAR1
SMIM11B
SMIM11A
NANP
XRCC2
SH3YL1
ACP1
HASPIN
ALKBH5
MOK
SLC2A11
CRTC1
AKAP1
PITPNB
TMEM209
SSMEM1
PATL1
LOC100287896
LIPT2
KDM8
C19orf81
RCBTB2
MAP2K7
UFC1
PBLD
HNRNPH3
CBY3
TRIM37
FADD
PPP1CB
PPP2CA
CDC7
RPL36
MICOS13
HSD11B1L
YEATS4
WWP2
NOB1
SLX4
SELENOI
ADGRF3
ERCC6L2
SOD2
NELFCD
NPM1
WDR4
PTK2
SPDL1
SLC39A7
RXRB
RING1
HSD17B8
MRPL45
SPDYE6
LOC100289561
CCNT2
TMEM141
CCDC183
CACYBP
SLC25A11
RNF167
PFN1
STYXL1
ZNF576
IRGQ
CDC5L
SKA3
MRPL57
SAFB
SAFB2
COL11A2
CDC20
GP1BA
THAP11
OARD1
NFYA
GPI
NUDT1
MRM2
CHD1
SS18L2
SEC22C
FXYD3
MTCH2
PUF60
OPA1
RBM17
TXNL1
MRPL24
HDGF
SRCAP
LOC730183
FUT8
SRSF1
ZZZ3
SMG9
TIPIN
VPS13A
MAD1L1
NUP107
SNRNP70
MARCHF7
ZNF583
FAM120B
COPB2
ASNSD1
ASDURF
AMZ2
MRFAP1L1
BLOC1S4
RPS19
UNG
ALKBH2
C6orf89
TAS1R1
NOL9
NOP14
GRK4
RSRP1
NUP50
THOP1
SGTA
HP1BP3
CCT5
ATPSCKMT
COQ9
CIAPIN1
RPS11
RPL13A
TRMO
DYNC2I1
RTL10
GNB1L
RALGAPB
OSCAR
NDUFA3
RPL12
LRSAM1
GRB2
CALR
TOMM20
TUBGCP5
SLC15A4
RAD23A
COASY
TMEM79
SMG5
MSL2
DPF2
GMCL1
LRFN3
NCAPG
ECHS1
POLR2J3
ARF3
QRICH1
UHRF2
SRRM1
TOR1AIP2
TOR1AIP1
TBC1D5
MPC2
DCAF6
TDP2
ACOT13
TMEM18
POP7
MLX
TAOK1
XPC
LSM3
C5orf24
NAA35
CCNQ
SPOP
THAP5
DNAJB9
PPP4R3B
TAX1BP3
EMC6
RPS7
WDR73
NMB
GDF5
CEP250
ZNF48
ANKFY1
SARS1
DHDDS
RPS6
MAP1LC3B
FBXO31
ASXL1
EEF1AKMT1
CCNC
ACAT2
INTS7
DTL
TMCO1
HSD17B1
CRB1
CAPZA2
NUP214
RPL17-C18orf32
RPL17
C18orf32
THOC3
PRDX1
ZFP91
LPXN
SMIM14
NCOA4
SPDYE7P
POM121
RFC5
TMEM139
CASP2
COP1
SCAMP5
GPBP1
ERGIC2
MED1
CDK12
ZBTB2
PPME1
C2CD3
AKAP11
MAK16
PURA
NAPG
TOPORS
SMIM27
AP3B1
RBAK-RBAKDN
RBAK
RPS28
NDUFA7
GPATCH3
CAND1
TTC32
NOL11
TRIP6
SRRT
NAA38
GID8
DIDO1
KAZALD1
DNAJC27
ZNF771
PRR14
FBRS
AURKAIP1
FSIP1
RPL27A
ARFGAP3
SMIM10L1
PRH1-TAS2R14
DYRK1B
CCDC106
MRS2
TMEM88
CYB5D1
HSPA4
UBR3
METTL5
CFAP70
GAS8
DBNDD1
SLC26A8
MAPK14
DBR1
ATF2
U2AF2
C6orf136
SNX5
MGME1
USP10
CDC34
WDR13
SHBG
FXR2
STS
PUDP
FAM135A
XPO7
DOK2
TTC23
LRRC28
PAPSS1
PDXDC1
RNF149
GPS2
EIF5A
SMARCC1
UBE2M
CHMP2A
VMAC
NDUFA11
DARS1
IPMK
CISD1
NKTR
TIGD1
SPEGNB
GMPPA
EIF4E2
PSMD5
EHD1
AHCTF1
LTV1
ETFA
NDUFA8
MORN5
MRM3
GLOD4
IREB2
HSF1
BOP1
EPS15L1
TMEM70
ELOC
C8orf48
CEP350
SRD5A1
UBE2D3
MMS22L
ZMYM4
ICMT
HES3
MATR3
EIF5
USO1
NOP16
HIGD2A
MINK1
ZNF664-RFLNA
ZNF664
CCDC92
WDR18
STRIP1
PRELID3B
RAB33B
ESRRA
CATSPERZ
PALB2
DCTN5
TMEM104
NAT9
ARPC2
ZNF638
ATXN7L2
SIRT5
UROS
BCCIP
MYL5
ATP5ME
FASTKD2
ELOVL1
EIF4A3
CC2D1A
C19orf57
PSMB2
SYS1
MTG1
PEX12
AP2B1
SUGP1
MAU2
HINFP
MAPKAPK5
HERC1
SHPRH
RBM15
ATAD3A
POLDIP3
TFB2M
CNST
SCAF11
MAP3K7
KIFAP3
RSL1D1
EFHC1
DUSP15
TMEM63B
MRPL14
KIAA1191
ARL10
UTP18
MBTD1
SURF2
SURF1
RPL7A
MED22
TMEM109
PRPF19
KCNN1
TIA1
PCYOX1
TIGD6
HMGXB3
SEC62
HSBP1
SLC25A4
SEPTIN7
RPS15
MKNK2
RCC1
TMEM63A
LEFTY1
GZF1
CSDE1
MORF4L1
VMP1
PTRH2
FZR1
DOHH
TMEM43
CHCHD4
FAM76A
CNP
PRDM4
SCAND1
ZNF34
RPL8
GATD3B
GATD3A
CUL3
ZBTB45
MAPKAP1
ZCCHC14
WRNIP1
MYLK4
MBTPS1
NFYC
AURKB
CCDC93
MRPS7
MIF4GD
GGA3
TENT4A
WDR43
DHX37
BRI3BP
DSN1
DLGAP4
MICOS10-NBL1
MICOS10
AASDH
ZBTB6
RC3H2
DFFB
CEP104
NBPF3
NUDCD2
HMMR
EID1
ZNF346
KIF5A
DCTN2
POLR2J
C15orf40
ZNF517
SF1
ALG8
ING1
CARS2
RFX1
ADAT1
PXMP2
POLE
GABARAP
MRNIP
THAP1
HBS1L
IPO11
DIMT1
GLCE
BORCS6
IKZF5
ACADSB
GOLGA1
PRKDC
MCM4
PUM2
SPDYE16
POLR2J2
CBWD5
SMG7
NUP153
CD2AP
SPAG16
FIP1L1
KIN
ATP5F1C
TMX1
SRP19
SLC25A10
MRPL12
SLC12A2
B9D1
SBNO1
AP2S1
WDR27
C6orf120
PIAS4
KCNJ14
GRWD1
WWOX
RPS29
NR1D1
ARHGAP35
TFAP2A
PPM1G
CPLANE2
RBPJ
PTBP1
PPAN-P2RY11
PPAN
ANGPTL6
ATF7-NPFF