ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3075718 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◣ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

HGC6.3
CPNE7
ADCK5
BRD3OS
METTL26
WFIKKN1
MVD
SSBP2
IFITM10
VCX
UNKL
SLC19A1
KHSRP
PYDC1
ZHX3
PFKP
ZBTB37
CNOT3
LRTM1
GLIPR1L2
BAIAP2L1
OSGIN1
HEXIM1
GFI1B
CCDC57
CRHR2
GCNT3
CXXC5
ELSPBP1
BSPH1
MAFK
BTBD2
RAD23B
ANO7
STXBP1
SBNO1
CUL3
TP73
PHACTR3
TTC16
PTRH1
YJEFN3
CILP2
RGS9
FBRS
SPI1
PBX2
GPSM3
ULK1
HDDC2
C11orf95
FST
ETS2
PBX1
PXDN
TRAPPC9
USP22
IFI27L2
SP4
C4orf19
TMEM86B
MTRNR2L8
PRR29
UBE2L5
CIB3
USF3
ABR
CAPN12
COLEC10
SCYL3
GOLPH3
IQUB
SPATC1L
ZCWPW1
MEPCE
VGLL4
PRELP
NAPRT
MROH6
CMKLR1
KASH5
JRK
ESRP1
FZD8
SPOP
VCX2
CACNG4
COTL1
SMARCD3
KCTD9
CDCA2
H3-3B
SETDB1
TOR4A
SLC29A4
KLK14
SPRING1
RNFT2
MRPL58
CDK18
ZNF605
MFNG
LARP1
MRC2
CLDN34
CALY
AFG1L
SMG7
FRMD6
AHRR
LY6E
CCDC7
THSD4
INTS1
CACNG6
SYNGAP1
LOC101928841
CUTA
PHLDB3
VLDLR
CORO2A
AK1
IL17RE
LPCAT4
MSRB2
ATXN7
TRIB1
SUZ12
FIBCD1
KLK4
ZNF512B
ARF3
CLN3
C10orf67
APOBR
PI16
GPIHBP1
SPEF1
CENPB
CDC25B
AGXT
TNNI3
MAP1B
NPRL3
MYADML2
OR10H1
KDELR1
GRIN2D
EFNA2
PELI3
RAB6A
LRRN3
MTMR4
VCX3B
BDKRB1
PRR12
USP34
SLURP2
TLCD1
NEK8
BIRC7
C17orf58
SPIRE2
MTRF1
EYS
P2RX1
MZF1
DSTN
BFSP1
SIGIRR
USP38
SLC8A2
KNDC1
PHF21A
UGGT1
RASSF2
LCN12
ZNF524
PRTG
FIZ1
ADAP1
APOH
CBLC
CMBL
RNF43
PCNX1
SP3
KCTD13
FGF12
C1QTNF12
NOS3
TMEM65
JPH4
TTYH3
RASA4B
DRC7
C17orf64
RSF1
AAMDC
TUBA1C
RECQL4
MFSD3
LRRC14
VCX3A
MECOM
LARGE1
ALKAL2
CABP2
TLK1
OTOF
MINAR1
ARFGEF2
ARL6IP4
SLC6A18
BCAS3
CATSPERG
SNAPC4
UPF2
CAP2
TFEB
POLK
CERT1
SLC43A2
USP32
IGLON5
RASA4
CADM4
MLXIPL
C16orf72
MAML3
HECW2
CCDC8
DACT3
ACTR3
MEAK7
NIM1K
NAV1
DNAJB8
URGCP-MRPS24
URGCP
APPBP2
TSC2
NTHL1
FOXJ2
FAM240C
CDC42EP5
BCAM
EFCAB2
MSI2
CLTC
ESRRG
LHFPL2
RAMP3
CACNA1S
ASCL5
SIPA1L2
TMEM18
POU2F1
GREB1
ITPR1
FOXA2
SPACA6
SP1
DDI2
SLC13A3
INTS9
HMBOX1
NAP1L5
ECH1
CST3
AMMECR1
RCAN3
CTCFL
NKX2-1
MTRNR2L2
MSH3
DHFR
ZFP41
MYADM
MFRP
C1QTNF5
KCNC3
PUDP
SATB2
CDH22
ZNF148
KCNQ2
PALLD
LRRC6
CHRNA4
PCBP2
MYL12B
PHF23
GABARAP
DVL2
VNN2
TMEM40
KLK7
RPH3A
PRDM11
LCN6
OCLN
ABI1
CREM
PITPNM3
NPEPPS
TMEM63C
DHX34
ACTRT2
SLC7A2
EOLA1
OR10H5
SRSF9
DYNLL1
NIBAN2
TSHZ3
FBXL19
PI4KB
MMP15
MED6
LHX6
FEM1A
ITIH5
RASSF5
CA4
MDM4
DYNC2I1
TXNIP
GPR78
HTR1F
PLCXD1
LMTK3
DYNLL2
PLXDC2
NPR1
AHCYL2
MAMDC2
SERPINA3
HS3ST2
ZNF205
IL26
RRM1
LRGUK
PLCB1
ADNP
KLHL23
TAF6L
HERC4
ATP1A3
CREBRF
FOXK1
CNPY1
LRRN2
LMNB1
CMIP
ARID2
BRD2
BBX
GTF2H4
NR5A2
PAK1
PRSS27
CCDC112
GOLGA6L10
FBXO11
MTRNR2L4
SMG1
SIGLEC15
NPAS3
BCAT2
KRT8
ADAMTS9
VILL
ZFR
PPM1D
GNAS
TSC22D1
SKA2
PRR11
CA11
LHX9
BRIP1
PDXK
PPP1R3E
BCL2L2-PABPN1
BCL2L2
HDHD3
GAB2
LAMC1
CANT1
DPH1
HMGB4
MRGPRE
ERICH6
ARC
BCAP31
ABCD1
ZNF131
MAP2K2
SBK2
ATXN1
TMEM187
HCFC1
RALY
KCNK15
CROCC
CPLX2
PTPRH
LMBRD1
PPP1R21
KMT2E
WBP1L
TMEM170A
LRATD2
KCNN4
TMCO3
PRPF40B
DCUN1D2
FAM71E2
TRA2A
ORAI2
PABPC1
MSRB3
HSD17B14
HMGN1
CYP24A1
RARG
PHF2
AAAS
OSR2
HOXC11
AMZ2
UBE2B
CDKL3
GRHL3
CPVL
CHN2
GNG8
CCDC149
FRG2
PRKCZ
PPP2R5C
EDN1
N4BP3
KRT23
GZMM
MEF2C
BARHL1
TMEM190
STAT6
IL11
MADD
CRY1
ATXN7L1
SCYL2
DEPDC4
GOLGA6L4
COMMD3-BMI1
COMMD3
BMI1
KLHL26
KCNIP2
FGD3
BCL11B
GRP
FOXQ1
RNASEH2C
MRPL38
TLCD3B
CALHM2
TAF7L
TMEM271
CDKN3
TMEM126A
TCL1B
PPP1R13L
POLR1G
WDR26
TSHZ2
TMEM30A
SOCS2
NCOA3
GTF2IRD1
INSM1
FAM104A
XG
SLC25A19
IL17D
RIMS2
CYP3A5
RNF19A
KLHDC10
KCNB1
CCK
UNC80
SSH1
S100A16
PTGIS
PPP1R16A
KIF6
FOXH1
ATP4A
SPRY3
SHOX2
RSRC1
SEC13
KRT82
TSPAN32
ID2
HSPA1L
HSPA1A
GOLGA6L3
C11orf21
APCDD1
GDF6
CGN
CAPN1
PTK6
NPIPB15
ERF
ZNF574
SLC6A1
LTBP4
GRIK5
GABBR1
UBTD2
RIPOR3
NFAM1
MTOR
GJA1
TASP1
IRX6
EFS
E2F3
SEZ6L2
SCAF1
RRAS
RBM27
ASPHD1
DDX59
CAMK2D
AJM1
TNKS1BP1
LSP1
BTBD18
ADAMTSL4
BRPF1
ZEB1
PHF7
BAP1
KLF10
PRAC2
PRAC1
KSR2
GATAD2B
COL6A1
CXADR
ORC4
NPC2
MBD5
ISCA2
DPEP1
MAGED4B
MAGED4
KRT80
GSC
TRAPPC2L
SGCA
GALNS
FKBP5
EDN3
DGKH
ARMC12
TM4SF1
CPNE6
NTNG1
GPR45
TRIM8
KLK6
DNAJC27
ZNF384
TFAP2A
PDZD3
KCNH3
DOK5
SP2
STX16
LENG9
COL20A1
PDE1B
TTLL10
SERPINI1
ROCK2
PDCD10
CYTH1
AGR3
WNK1
PERM1
IREB2
PRPF40A
ARL6IP6
DCAF5
RNASE4
ANG
MARCHF6
HRAS
TRH
RUNX1T1
ARRDC4
SDC2
FAM214A
TNPO3
MIR1-1HG
SNX16
ANP32B
PRSS8
PAN3
TAS2R16
NUCKS1
MYOZ3
GABPB2
TECPR1
LHX4
MUC3A
LIN7A
BCL9
TMC4
CTDSP1
AURKC
ATF7-NPFF
ATF7
CXXC4
COLEC11
BCL2L11
RNF41
NABP2
IKZF2
SIPA1L1
PRSS22
LRRC8E
LRRC4B
ITPRID2
FIGNL2
HAS1
TBX4
RPA2
PRRC2B
NUDT16L1
PPFIBP1
BPTF
PRAME
LDB2
GRK6
DRAP1
C11orf68
ARNTL2
ZNF462
TMEM88B
RAP2C
DUSP4
CFAP410
C1orf21
FAM117A
POLR2H
KRT35
FADS2
FADS1
CLCN2
RIN2
JDP2
DICER1
UCKL1
SH3KBP1
OR2AT4
IQCE
BRAT1
EBNA1BP2
CSNK1D
CFAP57
TRIM56
SHISA7
RNF139
CIART
ALMS1
INPP5F
PTGIR
SQSTM1
RC3H2
MGAT4B
BACE2
PRL
MLLT10
STRN3
IER5L
AP4S1
SV2C
SLC39A7
RXRB
PPP1R15B
HSD17B8
ADGRF5
RHOC
RAPGEF4
TSC22D4
TCFL5
NYAP1
ADRM1
UNC93A
PPP2R2C
ATXN7L3
JARID2
RSPH6A
KCNK3
CLEC3A
COL5A1
CDV3
TNS1
NRL
HIF1A
DCAF11
C14orf132
PODNL1
DCAF15
AMHR2
PDXDC1
ZNF783
PCF11
DCDC2C
S100A10
CACNB4
TPTE
SULF2
SCN1A
MED25
KYNU
STMN3
RTEL1
FEZF1
UBE2Z
TOP3A
SOX4
SMCR8
TMEM229A
MAD1L1
CTBP2
SEMA3F
CGNL1
ADGRG1
ZNF768
HES1
FOXN3
TRNP1
HES3
TMEM119
SBK3
SNRNP200
PDE4DIP
NRCAM
UBR3
PRR5L
METTL5
ZNF709
TRPV6
NEDD4
ALPK1
ADCY1
PGAM1
SCRT1
UPK3BL1
RHOD
CCNI2
SKAP2
FOS
SOCS5
SKIL
NEU4
ACAP2
YWHAB
SYTL2
NKX3-1
CPLX1
AFM
SPOPL
SH3PXD2B
PPP1R9B
EIF4B
B3GNT6
TTC6
RORC
FOXA1
ZMYM2
TRIM9
DLX1
CMPK1
DUSP16
BICRA
MIDEAS
FAM168A
ZFHX3
RAB11FIP2
CD63
RAP1A
KLF4
ZFP36
PLEKHG2
FBLIM1
ADGRG3
CD5
TRIM46
TMEM94
KRTCAP2
HNRNPF
BCAS1
SMURF1
UBR5
SCLY
NEGR1
GOLGB1
ELF2
BACE1
ASPHD2
TMEM245
RIF1
TSC1
SH2D3C
TEDC1
SPACA4
CRIP1
NGB
CRHR1
BNIPL
PFKM
KLHL36
ARHGEF5
TM4SF19
MFN1
SEPTIN2
PGR
HDLBP
ZNF71
B3GALNT2
SELENBP1
AADACL4
UBE2D3
SCAF8
FUT7
DNAH2
TSPEAR
SH2D4B
RAB5B
PTCH1
DEFB4A
ARID4A
UBE2R2
RNASE6
ASTN1
KCNJ15
PROZ
GJA5
DQX1
ARHGEF35
HSD3B7
PTPRCAP
CST4
CLEC4O
AMPH
NOVA1
POFUT2
GAB1
RABGAP1L
MPG
GABPB1
COBL
WDR18
SRRM5
RASGRF1
NUP155
HOXA4
BASP1
ALAS1
TNNT1
SAYSD1
POLR3GL
LIX1L
GALP
ANKRD34A
ACOXL
ZFHX2
THTPA
NDRG2
MAP3K7CL
C2CD4D
ARHGEF40
LGI4
FXYD1
RPS19
CBX8
IER5
FOSL2
CREBZF
RCVRN
CKB
ZDHHC17
MARCHF10
KCNV1
EYA4
ACER3
PFDN4
ZBTB9
TRMT1
PLBD2
NACC1
USP35
KCTD21
TEX9
RFX7
PRDM12
LYPD4
DMRTC2
SLC25A6
SAA1
ZBTB20
VIPR2
PLPP2
DPH3P1
AP1S2
PHF1
ILF3
HDGF
CSNK1G1
APOC2
PRTN3
FABP6
SIX3
PRAMEF7
FNDC11
PNPLA7
PNMA8B
MRPL41
MAPK3
LYPD5
DTX1
SLC22A23
DLG4
ACADVL
OR1F1
CD164
XIAP
STAU2
PITPNC1
MAPRE3
B3GALT4
JPT1
KCNN1
ITGB2
FBXL13
ARMC10
SIX4
MGAT1
LRCH4
FNDC10
FBXO24
GET4
USP25
PARD6B
TMEM256
NLGN2
HPSE
NUMB
MARCHF9
HBZ
CDK4
CCDC59
RUFY4
PAFAH1B1
KCND3
C1RL
IQSEC3
GSDMD
DBN1
CEP170B
ST7
PIK3C2B
MYBPH
EFR3A
PCK2
BAZ2A
SYNCRIP
MACIR
HNRNPH2
CPNE4
TPSD1
IRF2BPL
UBL4B
SSTR5
FOXR1
ZNF827
UBE2E2
AMBP
HOXC13