ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1916933 | Epidermal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◣ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

MTRNR2L2
MSH3
DHFR
FOXJ3
POLR3E
MTRNR2L8
NCOA7
H4C8
BRAF
UBE3C
ZNF839
SACM1L
ATXN2L
PSMA3
TIA1
MVK
PGK1
SLC35E2A
SHF
PPP6R3
EEF1A1
PRMT5
METTL26
PDE4A
BRMS1
B4GAT1
BCAR3
NPAS4
LTA4H
POLG
TRIM7
SLC35E2B
HSPA6
GH1
PMF1-BGLAP
PMF1
KNL1
PCGF2
GSTA4
VPS37B
LUC7L2
FMC1-LUC7L2
FMC1
HES7
ALOXE3
COL23A1
CREBBP
GBA
MTRNR2L1
FRG2
FAM71E1
EMC10
PLXDC1
APOA1
ING3
HECA
RBM23
NDUFS7
ILF2
C8orf37
RABEP1
RGPD2
RGPD1
RFX1
RNASE4
ANG
LRRC6
BORCS6
CCDC107
SS18
PAK1
RANBP2
HOMER1
FRG2C
DCT
HES4
UGT1A3
RAB11A
DPP9
RNASEH2A
PRDX2
FAM187A
EFTUD2
CCDC103
DYNC1LI2
ZBTB21
ATP1B3
CCDC115
HMGN4
JARID2
LOC105378979
JOSD2
ASPDH
EIF4A3
MTRNR2L9
HSPE1-MOB4
HSPE1
HSPD1
GNB1
NOCT
YTHDC1
DPH6
CDC42
TMEM259
CNN2
PAXBP1
ANKLE2
RPS29
RPL9
LIAS
UBB
GTPBP6
SMURF1
AP2A2
GOSR2
LYNX1-SLURP2
LYNX1
RALGAPA1
ELL2
HINT3
WDR45B
USP36
SMARCC2
TNFRSF6B
TAOK3
SUDS3
ZNF547
TRAPPC2B
PPIL4
POLR3F
DZANK1
ARIH1
IPO13
CD164
FAM234B
DLG2
BCL6
FBXO31
RRNAD1
ISG20L2
MRFAP1
CENPE
SSU72
COX19
CWC25
RTF2
PPP1R21
CLCN3
MAPKAPK5
UFSP2
C4orf47
ATP9B
COMTD1
JOSD1
GTPBP1
ADARB1
CDH11
WBP4
ELF1
CDC14B
TPBG
DOT1L
SMC2
LOXL3
DOK1
ORC5
RBKS
BABAM2
GUF1
HADHB
HADHA
ILRUN
AGAP2
TSPAN31
BZW2
ANKMY2
API5
SRI
GARS1
SYPL1
UBE2B
CDKL3
LOC101928764
ZNF891
ZNF10
PRMT9
THRAP3
OXSR1
TLE1
TRIM33
ZNF219
TMEM253
IQCH
AAGAB
PDXDC1
DUX4
PSIP1
UROS
BCCIP
COQ7
OR1F1
TEAD1
EIF4ENIF1
STAM2
ACTR10
TRAF4
ATP8A1
SELENOW
CACTIN
STK19
DXO
IQSEC3
CHD2
RHBDD1
ZNF300
RHBDD3
EWSR1
TLE3
ZNF576
IRGQ
INSM2
EPHB2
NDC80
METTL4
MLLT10
CTDP1
FLNA
EMD
RPL21
LYRM4
FARS2
OPA3
DENR
HROB
COMMD1
CCT4
PSMD1
CAPRIN1
SLC7A2
FRAT2
RPL14
GIT2
ANKRD13A
DCTN1
APTX
TPT1
FKBP3
FANCM
PRKCI
PAXIP1
MYO9B
HAUS8
LASP1
VARS1
PARK7
ZNF571
ZNF540
ARID1B
SETD5
NUP205
AHCYL1
PPP5D1
CALM3
PRDM10
MTRNR2L10
IQCE
BRAT1
KISS1R
POLR2M
ARID3A
PPP1R13L
POLR1G
STK35
UPF2
OR6B2
NDUFA10
C21orf91
ASAH1
YTHDC2
FIGNL1
DGAT2
PSMG2
CEP76
VPS37A
CNOT7
LIMA1
USP15
ATG16L1
SPOP
REXO1
UBE2H
CCDC59
FKBP1A
CENPN
PHRF1
ESYT2
H3C8
H2BC10
KCNAB2
PKNOX1
NSUN4
TRAPPC3
MAP7D1
KANSL1
VAPB
HNRNPU
TMEM250
RPUSD1
CHTF18
NDST2
KDM3B
FAM168B
NUP58
MBD3
FBXO34
ICE1
NUDT15
MIS18BP1
CCDC138
PDAP1
BUD31
PAK1IP1
C6orf52
ZFAND2B
C9orf72
CSNK1G2
POLR1H
TCP11L2
ULK4
STX6
STK17A
TIGD5
EEF1D
NUP85
SLC35B1
EOLA2
ZNF593
UNC45B
IMPDH2
C1orf232
CDON
POR
FRAT1
PTDSS1
MTERF3
NUDT18
RAB6A
NDUFB1
CPSF2
PPP3R1
IBA57
C5orf15
CCNL1
MLST8
HGC6.3
TIMM22
ALDH4A1
TMEM242
FDXACB1
C11orf1
EIF1
FLCN
SS18L1
PSMA7
CEP78
BRPF1
MAP2
RTKN2
SPATC1L
STK38L
MOB4
RAB11B
OGDH
PFDN4
NOL8
CENPP
NUF2
PACRGL
CRH
FAM53C
CDC25C
MIA2
UBE4A
CCDC71L
UBE2I
RAPGEF1
LSR
MED23
DHX15
PEF1
SNX12
RS1
PPEF1
HSP90AA1
BCAS2
ARHGAP22
XPNPEP3
ST13
ATG16L2
KPTN
MAP1LC3A
B4GALT7
FBXO33
GNB2
DOHH
C15orf48
FEM1A
OXR1
TMEM260
RBM17
VDAC2
ATP5MC2
RTRAF
SCLT1
RAD51AP2
GPAM
C4orf33
ALKBH3
R3HDM2
INHBC
SH3GL1
CHAF1A
COX18
KCNMA1
HDAC2
KRT6B
ANKEF1
HYAL2
LCOR
USP1
C19orf48
FAM227A
CBY1
LEKR1
TADA3
ARPC4-TTLL3
ARPC4
OPRL1
LKAAEAR1
CNOT6
SYNCRIP
CCDC83
GALR1
NOTUM
TJP2
TSN
GMPPB
AMIGO3
CAMTA1
STAM
CPLX2
CDC73
DHX36
PIK3R3
COPS7B
KMT2A
C12orf66
EPHB3
TRIM39-RPP21
TRIM39
IDH3B
UNK
URB2
TAF5L
SPTY2D1
PPIB
RAB10
UBE2Q1
VTI1B
USP37
LIN28A
CNOT9
ABHD6
ZSWIM7
TTC19
TRIP4
IFT52
ENOSF1
UIMC1
BCAP29
USPL1
HMGB1
RABL2A
XRCC6
DESI1
GGNBP2
SMIM8
POT1
ALG10B
ENTPD2
NPDC1
FUS
FOSB
UCHL3
COMMD6
GTF3C3
RNF139
PNO1
TTLL7
ARL8B
ARAF
ZNF628
MNAT1
RAB37
CCDC144A
HSD3B7
U2AF1L5
U2AF1
PRDX1
TMUB2
SETD1A
SPAST
TST
ST7L
MRPS5
MPST
CAPZA1
TBCK
AIMP1
MRPS24
TMED1
ASH1L
MIA3
TAF9
RAD17
AK6
MTF2
NBEAL1
CFAP221
PTPN4
BRD4
NEMF
LYSMD3
TUBE1
TES
RNF166
NAF1
LMAN1
FAM229B
CTU2
CCDC88A
C8orf33
WASF1
CDC40
VIM
TMEM222
MED4
FAM24A
FOS
ERCC1
ZC3H11A
ZBED6
RNF126
LRIG2
SLC25A26
SUSD6
FAM160A2
EIF3F
CNGA4
SUPT7L
SLC4A1AP
CTNNB1
HPS5
GTF2H1
KRT6C
PNPLA8
TRMO
EED
RPN2
MROH8
NDUFC2-KCTD14
NDUFC2
OMA1
DAB1
RBM42
RNF215
CYCS
RNASEK
C17orf49
MAML2
TTC30B
MAPRE1
MYL12B
YY1AP1
DAP3
GALNT10
PROSER1
NHLRC3
SFSWAP
LYRM1
DCUN1D3
TMEM161B
MRPS28
KRTAP9-2
CDCA7L
ZBTB2
CTCF
ZNF76
RPP14
HTD2
PUM2
LRP2BP
ANKRD37
FOXC2
PLEKHM3
LPAR6
SCRT1
RAD23A
BIRC2
MKRN2OS
MKRN2
TSFM
TRIP10
GPR108
ITPRIP
TNFAIP3
OAZ3
MRPL9
FGGY
PEX3
ADAT2
WDR36
KIAA1586
RTTN
PHTF1
CCDC90B
SLC35F5
TLE4
RBM48
PEX1
MTREX
DHX29
COMMD9
ARHGEF7
AIG1
RPL22L1
PIGF
CRIPT
THAP9
SEC31A
CWF19L1
CD55
PAF1
BZW1
ATG101
SIK1B
SIK1
CRYAA
CRYAA2
LRPPRC
C1D
CREM
LANCL2
RUVBL1
EEFSEC
CTBS
RICTOR
BTBD9
DDX5
CCDC6
AFF1
VEZF1
H2BC11
H2AC11
PPM1L
CHMP7
MTFP1
MAPK1IP1L
MET
VTA1
NMBR
FAM98B
UNC79
BTBD7
TCTE3
ERMARD
ERLIN2
CCDC7
MAP3K2
ZNF335
TRMT5
SLC38A6
PERP
CEP43
TEX14
RAD51C
NEDD8-MDP1
NEDD8
GMPR2
LENG8
RNF19A
RNF34
C1QTNF12
CBWD6
CBWD5
CBWD3
ZNF35
LCE3E
SERINC3
RAN
CBR4
AGTPBP1
ZFAND3
DIAPH1
SETDB2
CAB39L
ARRDC3
UBAP2L
C1orf43
USP2
KRT6A
GSTO2
ARL1
CDADC1
ADPGK
PLK2
CNOT3
CPNE7
ADCK5
BRD3OS
WFIKKN1
MVD
SSBP2
IFITM10
VCX
MAMDC2
UNKL
SLC19A1
KHSRP
PYDC1
ZHX3
PFKP
ZBTB37
LRTM1
GLIPR1L2
BAIAP2L1
OSGIN1
HEXIM1
SPAAR
GFI1B
CCDC57
CRHR2
GCNT3
CXXC5
ELSPBP1
BSPH1
MAFK
BTBD2
RAD23B
ANO7
STXBP1
SBNO1
CUL3
TP73
PHACTR3
TTC16
PTRH1
YJEFN3
CILP2
RGS9
FBRS
SPI1
PBX2
GPSM3
ULK1
HDDC2
C11orf95
FST
ETS2
PBX1
PXDN
TRAPPC9
USP22
IFI27L2
SP4
C4orf19
TMEM86B
PRR29
UBE2L5
CIB3
USF3
ABR
CAPN12
COLEC10
SCYL3
GOLPH3
H3-3B
IQUB
ZCWPW1
MEPCE
VGLL4
PRELP
NAPRT
MROH6
CMKLR1
KASH5
JRK
ESRP1
FZD8
VCX2
CACNG4
COTL1
SMARCD3
KCTD9
CDCA2
SETDB1
TOR4A
SLC29A4
KLK14
SPRING1
RNFT2
MRPL58
CDK18
ZNF605
MFNG
LARP1
MRC2
CLDN34
FAM240C
CALY
AFG1L
SMG7
FRMD6
AHRR
LY6E
THSD4
INTS1
CACNG6
SYNGAP1
LOC101928841
CUTA
PHLDB3
VLDLR
CORO2A
AK1
IL17RE
LPCAT4
MSRB2
ATXN7
TRIB1
SUZ12
FIBCD1
KLK4
ZNF512B
ARF3
CLN3
C10orf67
APOBR
PI16
GPIHBP1
SPEF1
CENPB
CDC25B
AGXT
TNNI3
MAP1B
NPRL3
MYADML2
OR10H1
KDELR1
GRIN2D
EFNA2
PELI3
LRRN3
MTMR4
VCX3B
BDKRB1
PRR12
USP34
SLURP2
TLCD1
NEK8
BIRC7
C17orf58
SPIRE2
MTRF1
EYS
P2RX1
MZF1
DSTN
BFSP1
SIGIRR
USP38
UCKL1
SLC8A2
KNDC1
PHF21A
UGGT1
RASSF2
LCN12
ZNF524
PRTG
FIZ1
ADAP1
APOH
CBLC
CMBL
RNF43
PCNX1
SP3
KCTD13
FGF12
NOS3
TMEM65
JPH4
TTYH3
RASA4B
DRC7
C17orf64
RSF1
AAMDC
TUBA1C
RECQL4
MFSD3
LRRC14
VCX3A
MECOM
LARGE1
ALKAL2
CABP2
TLK1
OTOF
MINAR1
ARFGEF2
ARL6IP4
SLC6A18
BCAS3
CATSPERG
SNAPC4
CAP2
TFEB
POLK
CERT1
SLC43A2
USP32
IGLON5
RASA4
CADM4
MLXIPL
C16orf72
MAML3
HECW2
CCDC8
DACT3
ACTR3
MEAK7
NIM1K
NAV1
DNAJB8
URGCP-MRPS24
URGCP
APPBP2
TSC2
NTHL1
FOXJ2
SP2
CDC42EP5
BCAM
EFCAB2
ADNP
MSI2
CLTC
ESRRG
LHFPL2
RAMP3
CACNA1S
ASCL5
SIPA1L2
TMEM18
POU2F1
GREB1
ITPR1
FOXA2
SPACA6
SP1
DDI2
SLC13A3
INTS9
HMBOX1
NAP1L5
ECH1
CST3
AMMECR1
RCAN3
CTCFL
NKX2-1
ZFP41
MYADM
MFRP
C1QTNF5
KCNC3
PUDP
SATB2
CDH22
ZNF148
KCNQ2
PALLD
CHRNA4
PCBP2
PHF23