ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190349 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◣ SRX190349: GM12878

◢ RUNX3: STRING

SPATA4
TEX12
BCO2
EFHB
EXD2
SLC4A4
MGP
UTRN
TMEM212
ABHD12B
WDR24
ANK2
ZNF541
MRPS14
NCOA1
POLR3B
CD28
TTC5
BTRC
TAS2R50
NPIPB11
CD1A
SMARCAL1
CCDC59
MYOM3
NUF2
HPSE2
TSHR
CCDC124
USP30
FAM160A1
EIF1B
CCDC130
ZBTB20
STAP1
SBF2
FAM8A1
CLUAP1
VTA1
NMBR
GTF2A2
MED23
PIGK
TMEM115
IPO4
PLCB1
STBD1
MRPL16
UCP3
PCDH1
MRPS23
DYNC1I2
NUP133
ITM2B
CAST
THUMPD3
APBB1
CLDN12
KRR1
SUGCT
NPIPB8
MPLKIP
SYNE1
TARS3
CHCHD3
NUFIP1
GPALPP1
CUEDC1
CP
PLCXD2
EVI5
COMMD1
PPFIBP2
PLEKHA1
SNAP29
PI4KA
ADAP1
EMILIN1
COPS4
CD36
ZNF529
C4BPB
HMCES
COA6
TADA1
SYCP2L
EPYC
RGS1
MFF
HYLS1
C3orf86
GPR141
HIF1AN
ZSCAN31
ZKSCAN3
TMEM208
SIRT4
LRRC29
NCBP3
APP
THAP10
LRRC49
MMS22L
WDCP
PROSER3
NPAS4
HSPB6
CLEC7A
SYCP3
DTHD1
RILPL1
GSPT1
SPTLC3
NRAP
ZBED9
TRIM40
WWTR1
MAD2L1BP
VPS41
ACVR2A
RSPH6A
RGL4
NCKAP1
ZMYM4
GPN1
DSTYK
CCDC121
EMB
CPEB3
NPIPB6
OXR1
RNF149
TMBIM4
NPIPB9
NPIPB5
SNAPC3
KLRD1
ZNF831
MMP9
PLEKHG1
GHRL
SC5D
FILIP1L
PSMC2
EXPH5
DNAJC2
DHX8
SLFN12L
CD55
DPEP3
NLK
DPM2
DEF6
EXOC3L1
E2F4
NPIPB12
CSTF2T
COX16
HELZ2
NSUN6
LMO7
ARL5B
SNTB2
SUN1
GTF2B
PRKCI
NPIPB4
NPIPB3
AFF3
HNRNPA1L2
CFAP54
SEC22B
HOPX
CCR1
NID1
RIN1
CCL15
TMEM267
FUCA1
PAFAH2
GPR18
SLC24A1
ACTR6
ZNF230
ZCCHC14
ARHGAP15
ZNF500
RANBP6
NR3C1
DEFB108B
TCF4
MOSPD3
NOS1AP
SCGB1C2
IL17RA
H4C4
H2BC6
MLX
COASY
WWOX
PDSS2
GRAP2
EPHB2
PCOTH
MIPEP
CDC27
ZNF784
PTK2
BANK1
UBASH3A
TRIP11
TMPRSS3
KBTBD6
FAM184A
ELAVL3
TJP1
CASP8AP2
WDR81
KIF13A
SYS1
DNAJC5B
CA13
OR8D4
NET1
SLC26A11
SGSH
PGAP1
DEF8
NCOA7
MRPS22
SMYD4
RPA1
ARL6IP1
SDSL
GPR65
TPM1
FCER1G
SLC12A3
MAL2
VPS72
PRDM10
MRPS18C
HELQ
SRM
CD101
GTPBP10
FRA10AC1
ARL14EP
HKDC1
NEGR1
RAD18
BLVRA
COL3A1
THAP12
GVQW3
LTF
PLD4
UTS2B
CCDC50
VPS29
TNKS
RGS14
RAD9B
NPIPB13
LRRC59
CSDE1
SHQ1
RFFL
TNFAIP8L2
ILF3
JAML
KLHL20
ZNF397
OR4D11
KDM3A
ERBB2
PDGFB
ERO1A
TTC21B
TBL1XR1
METTL15
KIF18A
ANXA1
ANKRD13C
SACS
CNTRL
ZNF350
SPOP
R3HDM2
AARS2
ELP3
TTC21A
GORASP1
KDM8
ITFG2
WDR47
PIGX
CEP19
TTC33
TRIAP1
ATP12A
JSRP1
NME7
BLZF1
EIF2B5
CHFR
ABCB1
CANT1
TIGIT
ZNF302
MGAT5
DOHH
LY9
TPR
ODR4
FAM126A
ENPP2
ZKSCAN4
LARGE1
DMWD
CHCHD2
CLN3
CCR2
APOBR
CYP51A1
COMMD2
KLRK1
ENPP5
CNTN1
C1orf127
ATP5MC2
SAXO1
RRAGA
NUGGC
ARIH2
TSACC
CCT3
TFPT
PRPF31
BRIX1
AKAP9
PRPF40B
PEX12
NAT10
LONP2
ABCC11
CATSPER4
INAVA
SLC31A1
FKBP15
VPS26B
NCAPD3
MEGF8
C5orf34
TNIP3
EVC2
EVC
FASLG
NSFL1C
CAND1
NT5C1A
NBEAL2
ZNF19
SORT1
RPA3
CTTN
ZNF501
RPL11
H6PD
RPS8
TFAM
PSMC3IP
FAF2
RNF139
WHAMM
FSD2
SAA2-SAA4
SAA2
REXO2
IPCEF1
CRNKL1
CFAP61
SIRT1
EFNA4
SIKE1
NOXA1
ZBTB45
CFAP20
TMTC2
LGALS2
IL1RN
INTS10
TRIP4
CHRNA1
ZSWIM6
IL33
COX6C
FCRL4
C1orf105
PHF20
LRRC34
SURF6
SLCO3A1
SLC17A1
DPY19L4
RAB38
RAB3GAP1
THAP9
SEC31A
PLEKHA6
STAU1
RIN3
P2RX5
FBXO8
CEP44
FOXJ3
CCDC30
HECTD1
COL16A1
LTA4H
SEMA4D
RANBP9
NR4A1
CYP26A1
ATP5F1B
UBQLN4
TOX2
SFXN5
LAMTOR2
SLC38A9
MICOS13
IFI16
HSD11B1L
EIF2B2
USH1G
TBL3
RNF151
OTOP2
COPZ1
SDAD1
H4C3
H1-6
TMEM229B
INTS12
GSTCD
NEURL3
ULBP2
PTPN22
EGR2
CDH1
CCIN
RCC1L
COPS8
CD2BP2
CCR5
ZNF563
CDADC1
TTLL12
XPC
LSM3
TTC7A
MCFD2
KIF21B
TPH2
DDX27
NLE1
LIN54
FBXO17
CCDC146
STK11IP
RBBP5
ABHD2
ZNRF1
SSH1
ARHGAP30
POLR2C
TIMM17A
OCSTAMP
CLIC3
APTX
SPECC1
TTC39C
THOC1
MDM4
CBLL1
CHPF2
ABCF2
ATP2C1
RERE
PRDM1
OGG1
GPR171
MS4A15
SPTY2D1
RAB4B
MIA
EXOSC9
RNF19B
PIGL
NCOR1
DYNC2LI1
RHEBL1
LOC645177
C2orf42
C12orf77
PSENEN
NEIL1
ZNF705E
RABGAP1L
ADD1
TM2D1
GTF2F2
TAGAP
MZF1
GPR35
ASAP1
ZFPL1
TMEM262
CTLA4
CDCA5
CARD8
DDX60
C12orf43
AP2S1
G0S2
ECI1
BCL2L11
SPATA6L
PLPP6
CD209
FFAR2
SCGB1C1
ODF3
MEF2A
MACROD2
LILRB1
HSBP1L1
C2CD2
TEX44
RRM2B
UTP11
UPP1
ATG5
PSIP1
CSNK1G3
SBF1
MRPL21
IGHMBP2
CBR4
ADCY4
KIAA1217
FXR1
YIPF2
TIMM29
CCM2
MAFF
CPSF6
ZFP3
PCDH8
MCC
SNRPB
ITGB3BP
FCAMR
EFCAB7
KCNE2
CD38
DYNC2H1
UBL5
TENT4B
LMO2
ZNF148
GTF2H3
EIF2B1
DUS3L
RPL22
RBM18
NOTCH2
MRRF
NLRX1
TTF2
DNAH8
TSG101
LRRFIP1
FAM234A
RAD54B
FSBP
ZBTB43
ITGB1
CEP85L
SSH2
SREK1IP1
CWC27
RPS3A
HSPA5
PLD3
STK19
DXO
CD22
TPD52
NFKBIZ
CYB5R2
ASB17
CPPED1
ZNF224
ITGAE
CHIC2
CCL26
TBC1D19
LYRM1
EML2
DCUN1D3
CCDC9
AIM2
PDE2A
TP73
LATS1
FLCN
ACSF3
RAD54L2
HNRNPLL
BATF
ZC3HC1
RPS7
RBM25
MRPL53
CDCA7
WNT1
ADGRG5
NELFA
DDX4
TUBG2
SPATC1
SORBS1
GRHL3
ZNF791
ZNF490
TEX46
KDM1A
TNPO1
HIF1A
ST3GAL5
IDH3B
MAP7
GPAA1
EXOSC4
CYP20A1
BCL2L1
TBCB
RPAIN
POLR2I
OVOL3
NUP88
NDUFA4
FLYWCH1
FAM118A
CCNI
SRSF5
NAPA
CD37
FOXO3
ARHGEF3
STX18
LMNA
BIRC3
ZP3
ZNF106
SUCLG1
SNAP23
OR6K3
KCNJ15
DMXL1
BCL3
AMZ1
RXFP3
FAM185A
DYNLL1
RXRA
NFX1
EPRS1
HILPDA
PPIL2
VIPAS39
TDRD7
AHSA1
ZCCHC9
PRND
PPP1R3B
KANSL3
FER1L5
GPR68
INPP5B
AGPS
WDR36
GBP6
ZNF225
WDR70
ARL5A
DPH2
CISD3
B4GALT2
ATP6V0B
TMX4
TMBIM1
DEPDC7
CCDC115
PSD4
HELB
ZNF561
PPP6R3
OR2T1
FBRS
ESR1
MTF2
ELF1
NOP53
NDUFAF5
ESF1
SPINK2
LCP2
CKAP5
AMHR2
MS4A6A
ZKSCAN2
ZNF181
NOTCH2NLC
ING4
TPST2
SEC23B
RAD23A
NDUFB6
ZNRF2
SMARCC1
RCC1
PLEKHG6
TUBB3
MC1R
ABLIM1
NIBAN3
DHX36
CLPB
SPDYE3
RGL2
PUM3
PALD1
MMUT
LBH
CENPQ
MGAT1
IGF1
CELF2
ZNF3
TMEM116
SYNPO2L
HTR1A
ERP29
CX3CL1
THEMIS2
PRSS55
MIS18A
HMGCL
TSNAX
TIMMDC1
SIAH2
ADIPOR2
TRIM13
NDUFA2
IK
HECTD4
SKA2
PRR11
NCF1
FCRLB
DARS1
TNFRSF14
MRPL3
ILDR1
SEMA6A
RAB31
KANSL2
CDH17
GSK3B
FLVCR2
COG7
CCDC97
PPIL3
NIF3L1
MAML3
ZNHIT1
SPRYD4
PLOD3
HTR5A
RAB22A
PPP2R5E
NOTCH2NLB
FASTKD1
ATP6V0A1
MAP3K7CL
GP1BA
CCT8
RPP14
HTD2
ABCB6
KAT7
EXD1
DPP9
CHP1
AP2B1
TMEM9B
CHST12
LINS1
TAF7
PTPN4
PREPL
ITGB8
CD5L
CAMKMT
DHTKD1
C5orf51
SLITRK3
PPA2
PMCH
AP1G1
PRPSAP1
PPP1R16B
NMT1
DCAKD
PTPN7
NBPF11
CLASP2
C8orf37
TMEM33
PNPLA1
EMP3
CCDC114
SNX20
SF3A3
RPA2
PLEKHM3
KCNK2
KCNJ5
DEXI
CLEC16A
TES
SF3B5
NUDT7
SNRNP48
NDFIP2
LUC7L2
GCFC2
FMC1-LUC7L2
FMC1
PRPSAP2
OXCT2
GRIK4
CCNL1
NFE2L1
IFFO2
GDF15
SRSF10
SYT12
PRKD2
FHIT
FAM76B
CEP57
STYK1
HMSD
CWF19L2
SLC66A1
AKR7A2
NTRK2
RTTN
RARG
CD226
SNRNP70
B3GALNT2
SELENOI
NAA35
IFNA2
DNAJC19
ADGRF3
SCAMP2
HDAC9
DRAP1
C11orf68
SCARF1
ITGAX
FNTA
FIGNL1
DYM
TICAM2
PITPNC1
NUP214
MTIF2
CDK14
ARMC1
RFC2
TM9SF1
HES1
GCNT1
TRMT10A
TOMM5
MTTP
ETFRF1
DEGS1
CFAP94
RPL31
RMND1
IDO1
CD160
ARMT1
TSFM
SLC39A8
DCP1B
YES1
RAB43
PDXK
WDR77
PRAG1
NFKB2
DDX23
ATP5PB
TRMT6
MCM8
CIPC
ZKSCAN8
H4C5
H2BC7
RAD51
NUCB2
LARP4B
E2F2
RUBCNL
CMTM6
SHISAL2A
MTLN
MAP2K5
LNPEP
GALNT5
RGS3
LRRC3C
CLCC1
ZSCAN12
RACGAP1
PRPF18
HHAT
EMID1
TRIM46
KRTCAP2
HSH2D
ELK3
TJP2
RPL29
PIGBOS1
PIGB
MACO1
INSC
ZUP1
ZNF599
ODC1
TMEM8B
SUCLG2
MANBAL
LAMC2
FAM221B
ASNSD1
ASDURF
ZMIZ2
ACTG2
YARS1
S100PBP
DOCK10
CTNNAL1
SHBG
SAT2
RTRAF
NBR1
CCDC117
TP63
NUDCD1
ZNF732
UPF2
RNASE6
SLC37A1
RPS15A
NOTCH2NLA
GSDMA
CIAO2B
CES2
RHBDL3
TMEM71
TMEM266
PHF20L1
CCDC15
SNTB1
HOXA4
ZNF335
SNAI3
CREBZF
CD86
ACP5