ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190223 | SK-N-SH
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◣ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

VSIR
LPCAT3
SOAT2
IGFBP6
RARB
TINAGL1
ANGPTL4
TRIOBP
SOX9
ERCC1
DHRS3
ARID3B
KRT31
UPP1
SERPINE1
FOXP1
RIPOR3
ASB2
PECAM1
OMP
H2BU1
H2AW
WSB2
CPA4
GIP
MTRNR2L2
MSH3
DHFR
NREP
RIN3
SREBF1
PEAR1
ECI2
NUBP1
CSRP1
ZNF367
SPHK2
DBP
LTBP3
ATXN1
ALOX5AP
PDLIM4
ABHD2
PDE12
ACACA
PHYHIP
BCL3
SMIM29
HMGA1
LAMA3
FLNC
STX1A
PRKAG2
BCAR1
DNAH1
ITGB6
SLC35F6
KCNMA1
HOGA1
ANKRD2
EXOC3L4
SCOC
BHLHE40
DUX4
COL1A1
MNT
LCA5
TMEM247
FOCAD
MYEOV
LPCAT2
RGS3
WDFY2
UQCRHL
FAP
USP32
CYB561
PRR7
ASAP1
TXNRD1
MB
PPP1R15B
MYLIP
CRTC1
PLPP4
TMEM91
B9D2
SH2B1
ARHGAP22
ITGB5
ITGBL1
NDST1
ABCC10
LOXL2
PTPRE
PHC2
BCKDK
ZFP36
PLEKHG2
SOCS5
MTRNR2L8
TOX2
CPT1A
NOL4L
PPP1R35
PHLDB2
TES
IRF2BPL
ANO6
KRT8
RNF10
COQ5
ADAMTS14
H4C12
H4C11
H2BC14
H2AC14
TMEM40
C2CD2
LEO1
H3C4
H4C4
H2BC6
KIF5C
S100A2
NDUFS7
ABCC3
NAA38
CHD3
SH3BP4
CLDN4
SMAD7
TECPR1
TMEM171
SLC1A7
ZGPAT
ARFRP1
H2BC15
H2AC15
ZBTB38
ANXA3
CST6
SLC35E2B
FAM184A
SMAD3
ANK1
TRIM55
PLCB4
MARCHF2
POLR2E
GPX4
CCL20
MLLT3
ITGA3
PLAU
TXK
CSNK1D
CDCA4
FAM180A
ARHGEF3
MTSS2
SPATA12
PRPH2
NEDD4L
SPDL1
THRA
SSH1
SOCS3
SLC2A2
H4C8
RIN1
BRMS1
COL16A1
LIMK1
MEST
KAT6B
TMEM205
RAB3D
CCDC159
AMOTL2
IFNGR2
TMCC3
DOT1L
DUSP2
ASTL
LDLR
RARG
TMEM127
CIAO1
DYNLL1
ABCA1
RNF213
MICALCL
PAPLN
SEPTIN9
FBXO32
FAR2
PI4K2A
ZNF507
TRIM25
KANSL3
FER1L5
PADI2
H2BC4
H2AC6
NAV2
OTUD7B
PITPNM2
KLF9
CLDN9
CLDN6
TNFRSF12A
THOC6
HCFC1R1
RGPD2
RGPD1
AXL
LTBP2
PLEKHA2
MAP2K3
SACS
HSD17B3
HMOX2
ASIC3
TGM2
SOCS2
AP5S1
KMT5A
STING1
PSG4
H4C3
H1-6
ANXA4
AAK1
PTTG1IP
EFHD2
MELTF
METRNL
KLF10
ANXA2
STRA6
PTPRH
PSG7
RPLP1
ZNRD2
IRF9
IL15
RPL26L1
PLAT
ING5
IKBKB
PSG5
ZNF655
ACSL3
TLCD4
SMIM3
ZC2HC1C
ACYP1
LTBP1
PFKP
CAPN2
SULT2B1
NPAS2
F2
PPP1R32
TGFBI
TBXAS1
HIPK2
CAMK1G
LY6K
H4C15
H4C14
H3C15
H3C14
SLC8A1
KIAA0513
MAP3K14
BCL9
PPL
SMUG1
ACIN1
CDH24
TNFAIP2
TCTEX1D4
PLK3
BTBD19
PDCD1LG2
IER3
FLOT1
UBTF
TIMP2
ANXA8L1
SQSTM1
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
DCSTAMP
BCL2L1
SLC22A18
LIMA1
TNFRSF1A
TANC2
EDA2R
ENG
PCOLCE
MOSPD3
PKN1
IVL
C3orf49
CEP41
FZD7
EAPP
SOS2
F2RL1
MINDY2
KIT
TMEM184A
MTRNR2L1
ST3GAL2
ODF3L1
CSPG4
CUEDC1
FSCN1
GPR87
FRMD4A
SLC44A1
HEG1
PCGF2
AHNAK
PSG9
ADAM12
ZNF395
INSYN2B
AGFG2
IRF6
PTGS1
STAT3
RALGDS
ECH1
LAMA5
ZNF365
TSPAN4
POLR2L
TCF7
CCN2
NRCAM
MRPS31
IQSEC2
STAC
MEAK7
CLCF1
OXT
LMAN1
SRFBP1
AVP
BDKRB1
SLC41A2
ZMYND8
EEF2
C1QTNF6
KRT7
SSBP2
CEP70
CCDC33
GEMIN6
MRPS10
PLIN3
SPEG
C17orf58
TBC1D2
PSAP
EIF4E
SMIM14
MAFK
TMEM270
METTL27
ETV4
KRI1
CDKN2D
H2AC19
H2AC18
CNIH3
MFSD1
ATP1B1
IGF2BP3
OSBPL3
PKM
PRIM2
NFKBIA
CD151
CRACR2B
PTP4A1
TEX43
ITGB2
TNFSF15
DNAJC18
ETV1
CCDC57
PSG1
ALDH3B1
UNC93B1
PRKAR2B
NUDT4B
SH3BP5L
CHRNA3
VGLL4
AJUBA
ENDOD1
RARA
CRABP2
CSRNP1
DRAP1
C11orf68
CTHRC1
CRYBG1
TMIGD3
PTHLH
SYNJ2
HSPG2
CCDC130
TMEM30A
IL4
IST1
GABARAPL1
COL3A1
TCIM
ATP13A2
SLC35F5
POLD4
TLR2
BAIAP2
MYADM
DENND6A
TTLL2
CCDC200
CAPNS1
SLC25A20
HBP1
RASD2
TAGLN2
PDLIM7
MICAL3
EXOSC4
GPAA1
TNFRSF10B
PAQR5
OXR1
ENTPD7
CDCA7L
CFAP251
LIMS4
LIMS3
IRF2BP2
KIF3C
SAMD11
APP
VOPP1
RAPGEF5
TTLL6
IL6ST
IGFL3
ARL14EPL
IGFN1
MED9
DGKD
PSG11
REXO4
ADAMTS13
PTPRB
PHLDA3
INA
SKIL
PACSIN2
PCDH18
KRT80
GDPGP1
CIB1
ANXA8
PXN
SYTL3
MICAL2
MICALL2
DYNLT1
GSTA4
TACSTD2
HMG20B
GIPC3
LOC100509620
RNF145
OR10V1
SLC25A35
RANGRF
BCL2L13
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
KLHL25
ZSWIM4
RBM7
C11orf71
SPRED1
CREBBP
CBX5
FOSL1
FOXS1
DNAJC16
CASP9
CTR9
CHN1
KRT86
H4C5
H2BC7
H2AC7
MTUS2
STX16
IL1R1
SELPLG
ZBTB20
RNPEPL1
DUSP28
ANKMY1
FOXN3
CLU
ELFN2
TTYH3
UHRF1
RBM28
ARRDC5
CPNE7
PMEPA1
ESRRG
DKK3
BCAR3
BAHCC1
PRKACB
LMNA
DONSON
BICD1
TBC1D22A
TYW3
TMEM200A
CRYZ
H4C13
H3C11
H1-5
H2AC16
SPIRE1
PSMG2
IRF1
WNK4
OPA3
FASN
ARIH2
REC8
GRAMD1C
OSMR
TJP2
HOXC10
TCAF2
PPP6R1
RFX2
PFKFB4
UCN2
PARP2
CCNB1IP1
NEDD4
RCL1
MBNL1
TAS2R41
SIN3B
GADD45A
CDC42EP4
ATP6V0E2
SPATA25
NEURL2
CTSA
ZSWIM1
BMF
TTI2
TBC1D1
WDR1
WDR61
RPL26
KRBA2
CCDC63
HTR1D
ABCB9
OGFOD2
ARL6IP4
PKD1L2
ZG16B
CHN2
ART4
NPAS4
RTN4
CXCR5
PLEKHS1
ATP8B1
PRTG
C1orf100
RRAD
CIAO2B
CES2
CDH16
HPCAL1
HRH1
PAMR1
GBA
RARRES1
NIBAN2
KRT19
RAB27A
TCOF1
MTOR
MME
CDV3
ZBTB7C
KCTD14
HSPA5
ATXN10
KAT6A
TNS1
PSG8
FAM174C
CIRBP
HERC3
ACVR1
GAL
SLC35F3
LPIN2
ASIC1
CREB3L2
MVP
PAGR1
CTAGE15
SNX29
RNF144B
ISLR
POLR2J3
PLAAT4
ANXA10
LIMS1
EPO
NAMPT
FGF1
FCRLB
ATXN2
JUNB
RBKS
BABAM2
MYPN
STX18
PIKFYVE
IL24
ARID3A
BEST3
STN1
NUDT15
FHL2
SAV1
GPRC5A
NR1D1
ZYX
FAM131B
PSG3
SCNN1A
LTBR
UBE2T
PPP1R12B
METRN
ANTKMT
CCDC78
TRIM47
FZD6
SMARCD2
CLK3
GNG12
AP3D1
NRP1
ZNF76
PRSS22
NAV1
CTSW
EFEMP2
MSANTD3
RAD23B
SLN
TXNDC11
GFI1B
MTRF1L
TLR9
PANX1
TSC1
RUNX1T1
TBP
PSMB1
MMP2
ZNF827
PLEKHG4
PPP2CB
RHOF
SCAF1
RRAS
CAVIN4
LEKR1
WDR81
TLCD2
GEM
RBBP5
HMGN4
UPB1
DENND4B
PLCD3
ACBD4
C6orf47
BAG6
APOM
OPTN
CCDC3
ELK3
RXRA
KCTD4
GLIS2
MRPS22
CCDC197
COTL1
HIP1
ALDOA
TENT5B
TRPV2
HSPA6
SLC14A2
KCNJ15
TLK2
KBTBD2
PLEKHO1
KLF16
REXO1
MPDZ
TM4SF18
SPAAR
HRCT1
STX10
IER2
TIMM13
TRAF3IP3
PYGB
PLEC
TMCO1
HNMT
ST6GALNAC3
PTGIS
FAM187A
EFTUD2
CCDC103
GFAP
CUL4B
SH3KBP1
PSMD12
PTH2R
PITPNC1
TLN1
CREB3
MXRA8
TCP11L2
VIP
GABRE
SLIRP
ALKBH1
CLDN12
AANAT
UBE2O
PSG2
FGF16
PHF19
LIPN
CCDC174
SLC24A1
INTS14
CDH18
AOPEP
ANK3
NR3C1
LRP4
GARRE1
CD82
SMIM20
TMEM120B
GOLGA7B
SEMA5B
PDE1C
SBNO2
ZNF281
LAMB3
LIMK2
GUCA1B
SMYD3
RASGRP3
ARID2
CEBPE
RIN2
CAST
FASLG
CFLAR
TACO1
CMTM3
VSTM2L
SOWAHD
ZDHHC7
TRMT2A
RANBP1
TRIM7
PRELP
PADI3
CARD19
SFXN2
ARL3
ADGRG1
KCNN4
CARD10
MFF
LYPD1
FADS3
SLC26A11
SGSH
NOP53
DPP9
LASP1
WDR25
WARS1
XKR9
LACTB2
SZRD1
FRA10AC1
GRAMD2B
MGAT5B
EEF1E1
RITA1
DDX54
FSTL3
COLEC12
ACTBL2
MAMDC2
MTMR1
KIFBP
ARL4D
C10orf67
ATP7A
CDC73
SPATA1
GNG5
GLRX2
KLHL24
DNASE2B
MUSK
PAFAH2
MTRNR2L9
WNT7B
ZBTB5
TNXB
PCNA
CDS2
ESD
TMEM95
KCTD11
ARPC1A
GPATCH8
DNMBP
GATD3B
GATD3A
CAV3
DDX47
CDK3
PPP6R3
TBL1X
DISP1
PROSER3
LIN37
HSPB6
CALCOCO2
RNF223
SRSF2
MFSD11
ZNF503
KCTD7
DAB2IP
PMPCB
LSP1
PDE6G
PIEZO1
CLMN
MTF2
C7orf65
MAGOH
CORO2B
TASL
GNA12
MAP3K7CL
WNT5B
TMEM104
NAT9
FRZB
TRIM2
DCBLD2
SPRED2
C11orf91
C11orf86
SYTL2
DCLRE1B
AP4B1
PTPN14
NEBL
CRISPLD2
ANXA5
MPV17
MAP1B
NR1D2
NKIRAS1
PCTP
KDM4B
DEPP1
FLYWCH2
EIF1B
TNIP1
CTSD
PARP16
RABGEF1
KLF12
ZFAND3
S100A10
DSEL
IRAG1
VGF
CDO1
AP1S1
SCARB1
GSN
KDM3A
TNFRSF6B
GPN1
CCDC121
CNIH1
SINHCAF
GALNT15
ACLY
NDUFS8
NEK6
PRDM10
PGS1
L3HYPDH
JKAMP
SRPX
GPR39
CBLC
WDR74
STX5
ARMC5
ZNF843
ALAS1
LOXL1
NYX
CLDN11
STMP1
GALNT12
CRYGD
CRYGC
LDHD
HSPA8
RNF141
CDK15
TMEM259
CNN2
MEIS2
TRIM56
CDKN2AIP
RBM19
DPEP1
SSBP3
SH2D7
MEGF10
AHNAK2
KDM6B
SORBS3
CMSS1
TMEM250
CLBA1
ARHGEF6
SIGIRR
CBLL1
VEGFC
SLC16A12
STOM
SLC25A45
FRMD8
ATXN3
ZKSCAN8