ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100386 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◣ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD2
RGPD1
DYNLL1
MTRNR2L9
LEKR1
EMILIN2
EAPP
H4C15
H4C14
H3C15
H3C14
H4C12
H4C11
H2BC15
H2AC15
CCDC200
NGB
H2AC19
H2AC18
SCRIB
MTRNR2L1
WASHC2A
MTRNR2L6
ZC3H10
RPL41
ESYT1
H2BC14
H2AC14
H2BC4
H2AC6
LOC112694756
C1orf198
LAMP1
H4C3
H1-6
WASHC2C
DUX4
TAF12
PAFAH2
PARP16
SIRT4
POLR2J3
POLDIP3
WDR74
STX5
FRA10AC1
SKIDA1
HSPE1-MOB4
HSPE1
HSPD1
TMEM107
PCNA
TMEM230
CDS2
STAT1
H3C4
H4C4
H2BC6
CALM1
KIF2C
TRMT2A
RANBP1
PHF23
GABARAP
DVL2
CCDC144A
DNAJB4
NCBP3
GBA
AMDHD2
B4GALNT3
ATP6V0C
MTF2
TM9SF1
IPO4
MAMDC2
H4C8
INTS12
GSTCD
KDM3B
CASQ1
MDN1
CASP8AP2
ATR
TAP2
PSMB8
SLC20A1
IRF9
UBTF
DAB1
TEX9
OMA1
RFX7
TSR3
GNPTG
H4C9
H2BC12
H2BC11
H2AC12
H2AC11
NUP54
NUF2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
LRRC37A3
YIPF2
TIMM29
TOR1AIP2
TOR1AIP1
PIM1
RPS7
HEXA
GSPT1
DPY19L4
ZSCAN30
PTEN
KLLN
CDKN2AIPNL
DENR
DRAP1
C11orf68
GORASP2
MTERF1
VPS13D
ARMC7
AFF3
POR
GTF3C3
C2orf66
ACSL3
MDM2
VPS33A
TVP23B
RHOT2
RHBDL1
RBIS
KRTAP21-2
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
RAE1
MTRNR2L3
BNIP1
ZCCHC4
NPAS4
SCGB1C1
ODF3
HS1BP3
RNF223
NOXO1
RPS2
RNF151
TBL3
TMCC2
MRPS23
TDRD7
VOPP1
NOLC1
JUND
IQCN
ZMPSTE24
LRFN3
STX16
COMMD2
NCF4
MPDU1
LOC100996842
EIF4A1
CD68
GNAI2
PRND
RRM1
CACTIN
ADNP
PRR5L
COMMD9
TCTN3
CSPP1
COPS5
BBC3
ASB2
GRAMD1C
N4BP3
MED23
ENPP3
DHX33
AURKAIP1
NME1-NME2
NME1
SLC35B1
HASPIN
UBXN6
EXD1
CHP1
CCNC
PLEKHM3
DDX1
POLR3B
MAP1LC3B2
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
RABL2B
MARCHF8
PTPN6
C12orf57
RAP1GAP
CLCN7
BCL3
SSBP1
COMMD4
BHLHE23
ERVH48-1
STX18
CTNNB1
PSMD3
SLC38A7
NDUFS7
MRPL44
SLC39A13
AKAP11
FOXJ3
SHMT2
NDUFA4L2
DPP8
ACTR10
SF3A3
STAT3
STAM2
ATP5MC2
POLR2J
ACTRT3
MYNN
RABL2A
TMEM147
HMGN2
CSNK1D
ZNF507
SLC2A4RG
LIME1
EIF3F
APBB2
GTF2H2C_2
GTF2H2
LRRC59
TSN
ZNF25
RPL10A
TTYH2
RPL38
PTMA
MLEC
LSM11
ABCA3
HPS6
ARMH3
SMARCD2
DCP1A
SLC25A51
PDE11A
RBM45
ALG10B
POLG
NCAPG
BAIAP2
ABHD17A
CDC37
TMEM242
CDK5RAP1
SCGB1C2
GTF2H2C
DGKZ
ATP6V0D1
AGRP
H4-16
H2AJ
BHLHA15
UBALD2
INTS1
CDC42BPG
TSSK4
RPL21
OR2L13
OR2AJ1
CYP1B1
RDH5
RBM28
DSTYK
ITGA7
BLOC1S1
TRIM69
RIF1
AP1M2
ID1
RMDN2
COL4A2-AS2
DENND4A
RBBP5
TATDN3
NSL1
DCK
STK17A
H2BC17
H2AC17
ANKRD36B
H3C12
NCAPH2
LMF2
ZFP36
PHRF1
INTS5
GANAB
NOXA1
TAF3
HDGF
PAF1
MRPL24
SMPD4
MZT2B
SH2B3
WASHC5
NSMCE2
DCP1B
SLC12A6
NUTM1
NOP10
RWDD1
ZNF358
MCOLN1
JRK
MRPS31
PDE6D
COPS7B
SCAND1
POLD3
NAGPA
PHB2
VPS50
HEPACAM2
TMEM127
CIAO1
TTC8
NUP205
GLIPR1L2
TLR5
DHX8
CERS2
ANXA9
NSUN4
TSNAX
RPS20
TMEM115
NPRL2
CYB561D2
MAPK8IP3
BCL2
RHOF
SETD1B
ZBTB45
SLC27A5
USP3
SPATA25
NEURL2
CTSA
ZSWIM1
FAM227B
DTWD1
TMED9
B4GALT7
CAB39
ZNF341
PRRG2
NOSIP
TRIP6
SRRT
RAF1
SNX18
IQCG
RPL35A
PEX3
ADAT2
XKR7
GALK2
COPS2
LPCAT3
ARSG
GRM4
ADGRG1
TBC1D19
GABPA
ATP5PF
DCLRE1B
AP4B1
FRG1
SH3GL1
CHAF1A
TREX1
SHISA5
H3C6
H2BC8
H2AC8
IER3
FLOT1
TRAPPC3
MAP7D1
SMIM41
ATG101
TOR2A
UGT8
SLC39A3
DCAF10
AHCY
COL9A2
R3HCC1
SRRM3
AMZ1
HGFAC
INO80C
PLEK
TGM1
RABGGTA
SLBP
MRPL1
TMEM129
TACC3
ARL14EP
PXK
DIAPH1
LZTFL1
PSMF1
ZWILCH
SNAPC5
RPL4
TUBA4B
TUBA4A
STK16
GLB1L
PRKDC
MCM4
PLCD3
ACBD4
PCID2
CUL4A
TAS2R40
SUGCT
MPLKIP
AP5B1
ATF3
NRTN
BBS1
OVOL1
DUSP4
MED27
UNK
H3-3B
VTA1
NMBR
FFAR3
FFAR1
HSPA6
COX16
RBM17
KIF21A
PPARD
ANKRD46
GPSM1
CARD9
KRR1
PPIP5K2
GIN1
TIA1
PCYOX1
UBQLN4
LAMTOR2
PRDX1
EIF2D
SKP2
LMBRD2
MOB4
LARP1
MAPRE3
POLR2J2
BPTF
FBXO5
ARID2
STOML1
RPL27
IFI35
NUDT17
TTLL4
RAD23A
CALR
C8orf37
PML
NBN
TIPIN
RFC4
PPIF
KMT2E
RTTN
TOX4
RAB2B
TRAF4
CRLF3
ATAD5
LCN12
FBXW5
C8G
TCHP
SLC17A7
PIH1D1
NMUR1
ALDH16A1
RBSN
SLC33A1
ATG16L1
IPO13
RPS15
PNKD
SELENOH
BHLHE22
GPBAR1
AAMP
APC2
MYEOV
CHD1L
NFAT5
LSP1
PDE4A
NPR1
ILF2
VPS29
RAD9B
LRRN3
IL21R
NR1H3
ACP2
DPP9
FAM207A
CDC73
PPP6R1
TOMM22
ZBTB4
SLC35G6
POLR2A
HCN2
TOP3B
CREM
PSMC3IP
SEC13
FCMR
PRKCE
RGL2
PFDN6
SLC2A4
TPD52
LOC102724770
DGCR6
ACTR3
RETSAT
MCM3
MRPL23
RNPS1
MMACHC
CCDC163
ADAR
TESK2
CCNL1
SMG6
RUVBL1
EEFSEC
CLMN
PSMC3
FAM111A
SLC35E2B
ZBTB40
RSAD1
FAM228B
TP53I3
SF3B6
INKA2
SPNS1
TMA16
RTP3
LTF
SAAL1
DDX20
CHAD
SART1
WBP1
INO80B
PPP1R15A
PLEKHA4
ARHGAP42
FASTKD1
NOTCH2NLA
SNRPB
TUBB
MDC1
ZER1
ART1
NDUFS3
KBTBD4
FAM180B
SLC1A4
MRPL58
RNASEH2C
KAT5
NOM1
RWDD3
TRIM32
ASTN2
PNPT1
E2F3
SLC24A1
INTS14
UBC
ZDHHC4
USPL1
HMGB1
AARS2
PRRT2
GOSR1
MAZ
CEP120
KANSL3
FER1L5
U2AF2
CCDC106
CCDC65
CTSW
KMT2C
CCDC85B
TNFRSF21
ERCC5
MEF2A
DEF6
USE1
FIBP
TUBA1B
BROX
AIDA
DNAH1
APOBEC3B
FTH1
SNRPD3
GUCD1
BEST1
TUT1
MTA2
UGGT1
SGCA
PCBP2
LUC7L2
PSMG3
ZFYVE26
RAD51B
KLK1
TMEM91
B9D2
CIPC
ZNF639
C8orf76
ZNF518A
SCFD1
TGFB1
PLSCR2
CDKN1A
USP30
HINT3
ATF4
TRIP4
PCLAF
RMND1
ARMT1
POLR3E
PRDM1
EIF1B
UTP3
NFKB2
SPATC1L
NUP153
ZNF219
TMEM253
COMMD1
POLR2C
SNX3
CCT4
GNB2
U2SURP
NDUFS6
MRPL36
CCNT1
HEATR5A
FCHSD2
ZNF148
RIN1
BRMS1
SRMS
PTK6
SCAF11
TNFAIP3
ROM1
EML3
B3GAT3
NCBP2AS2
NCBP2
PES1
SRSF7
METTL7A
CCR1
UCKL1
ZNF3
COPS6
TAOK3
SUDS3
THAP11
SRF
CUL9
C18orf25
GADD45B
NEUROG2
KAT6A
ENOSF1
MAD1L1
TMEM167B
S100A13
ATAD2B
S100A1
CHTOP
NUDT1
MRM2
SSNA1
ANAPC2
NANOS3
CNOT6
VPS45
CARM1
KLHL20
MOGS
PAK1IP1
C6orf52
NAA80
IFRD2
HYAL3
MRPL53
TIPARP
DERL3
CYBA
BAK1
NPAT
ATM
EEF1A1
PRMT5
NAPA
SLC43A3
NSFL1C
MFSD4B
SNRPE
TSSC4
SMIM29
WDR97
MAF1
CYC1
FLOT2
DHRS13
FAM187A
EFTUD2
CCDC103
CCDC43
NXF1
TMPO
MAP3K9
PHF13
RAB8A
C19orf48
CCND3
PTPRCAP
RPS6KB2
TAF8
NAPG
CRK
TNIP2
PLS1
TTC39C
CLCNKB
EDC4
FMC1-LUC7L2
FMC1
SACM1L
HTR5A
KLHL12
RMDN3
GPR68
GCHFR
PAXBP1
MARCHF7
RARA
H2BC5
H1-4
MRPS14
GRB2
SYS1
PRMT3
TP53TG5
USP48
NEU4
VARS1
MAT2A
SERTAD1
PRX
ZNF784
CACNB3
TMEM101
GCNT1
MAPK1IP1L
TOM1
SDCBP2
RPL29
TMEM41A
UBE3D
DOP1A
TMEM138
CYB561A3
MGAT5
NT5C1A
MCM6
C5orf24
LMNA
TMEM79
SMG5
CCAR2
C8orf58
PTPN3
MPEG1
TXNIP
ORAI2
PSMD11
TOR1A
FARSB
FRG2
GFI1B
TSC1
PSMA1
CNPY3
ARHGAP22
TRIM65
MRPL38
RAD52
PBLD
HNRNPH3
GAS2L1
ING1
CARS2
ALG10
NUDT8
NOL11
MTMR6
RXFP4
THOC1
FBXO34
TAF6
MBLAC1
CNPY4
TEKT2
ADPRS
TCTEX1D2
SH3BP2
ATN1
MAPKAPK2
BUB1B
AP2M1
SNAI3
TCF7
TM4SF4
ERMP1
CD2BP2
ANGPTL4
WSB2
SREBF1
ITGB5
VSIR
MYLIP
CPT1A
BCAR1
ARID3B
ZNF367
DHRS3
TNPO3
SLC25A20
TAGLN2
TOX2
S100A9
PGLYRP4
DKK1
SQSTM1
RXRA
TINAGL1
SOAT2
IGFBP6
ATXN1
PDE12
ACACA
ACTN4
MEAK7
TRIOBP
VGLL4
ZMYND8
DLG4
ACADVL
KRT7
POLR2E
GPX4
TES
MB
RBM24
ZGPAT
ARFRP1
COTL1
SPHK2
DBP
DOT1L
CIITA
PEMT
S100A2
FASN
PEAR1
ANP32C
AMOTL2
HMGA1
TSKS
AP2A1
UQCRHL
MRPS10
ECH1
FOSL1
CDK11A
EFHD2
TRIM25
TRIM55
SIRT5
SLC35F6
NUBP1
RARB
USP32
TGM2
H3C3
H1-2
ERCC1
KLF10
TNFRSF1A
BHLHE40
WDFY2
ETFDH
C4orf46
TRIL
PHC2
CRY1
FBXO46
NFKBIA
EXOC3L4
SCNN1A
LTBR
GABRE
FHL2
PPP1R15B
LIMS1
NFE2
RRN3
PECAM1
TBP
PSMB1
ITGA3
NOL4L
OTUD7B
CCL20
ANXA1
PLAU
UROS
BCCIP
AJUBA
MGST3
NOL7
C2CD2
CRTC1
COL23A1
SH3BP4
SEPTIN9